Summary
Concanavalin-like lectin/glucanase superfamily
This superfamily includes a diverse range of carbohydrate binding domains and glycosyl hydrolase enzymes that share a common structure.
This clan contains 51 families and the total number of domains in the clan is 314242. The clan was built by A Bateman.
Members
This clan contains the following 51 member families:
3keto-disac_hyd Alginate_lyase2 ArabFuran-catal Arabino_trans_N Bac_rhamnosid Bact_lectin bCoV_S1_N Calreticulin Cleaved_Adhesin DUF1349 DUF1583 DUF1583_N DUF1961 DUF3472 DUF4975 DUF6250 Exotox-A_bind Gal-bind_lectin GalBD_like GH131_N GH43_C2 Glyco_hydro_11 Glyco_hydro_12 Glyco_hydro_16 Glyco_hydro_32C Glyco_hydro_7 HA1 Laminin_G_1 Laminin_G_2 Laminin_G_3 Lectin_leg-like Lectin_legB MAM Methyltransf_FA Neuralized Pentaxin Peptidase_A4 Polysacc_lyase PRY Reoviridae_Vp9 Sial-lect-inser Sialidase SKN1_KRE6_Sbg1 SPRY TgMIC1 Toxin_R_bind_N TSP_C VP4_haemagglut XET_C YJL171C_Tos1_C YrpDExternal database links
CATH: | 2.60.120.200 |
SCOP: | 49944 |
Domain organisation
Below is a listing of the unique domain organisations or architectures from this clan. More...
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Alignments
The table below shows the number of occurrences of each domain throughout the sequence database. More...
Pfam family | Num. domains | Alignment |
---|---|---|
Methyltransf_FA (PF12248) | 1370 (0.4%) | View |
GH131_N (PF18271) | 1116 (0.4%) | View |
Polysacc_lyase (PF14099) | 949 (0.3%) | View |
ArabFuran-catal (PF09206) | 896 (0.3%) | View |
Arabino_trans_N (PF17689) | 675 (0.2%) | View |
Cleaved_Adhesin (PF07675) | 640 (0.2%) | View |
Bact_lectin (PF18483) | 625 (0.2%) | View |
YJL171C_Tos1_C (PF10287) | 620 (0.2%) | View |
DUF3472 (PF11958) | 509 (0.2%) | View |
GalBD_like (PF17974) | 312 (0.1%) | View |
DUF6250 (PF19763) | 255 (0.1%) | View |
DUF1961 (PF09224) | 234 (0.1%) | View |
DUF4975 (PF16346) | 90 (0.0%) | View |
Sialidase (PF02973) | 80 (0.0%) | View |
DUF1583_N (PF20407) | 69 (0.0%) | View |
DUF1583 (PF07622) | 66 (0.0%) | View |
bCoV_S1_N (PF16451) | 41 (0.0%) | View |
YrpD (PF15493) | 17 (0.0%) | View |
Sial-lect-inser (PF09264) | 16 (0.0%) | View |
Toxin_R_bind_N (PF07953) | 16 (0.0%) | View |
VP4_haemagglut (PF00426) | 11 (0.0%) | View |
HA1 (PF18239) | 7 (0.0%) | View |
Exotox-A_bind (PF09101) | 6 (0.0%) | View |
Reoviridae_Vp9 (PF08978) | 5 (0.0%) | View |
TgMIC1 (PF11476) | 4 (0.0%) | View |
Total: 51 | Total: 314242 |
Please note: Clan alignments can be very large and can cause problems for some browsers. Read the note above before viewing.
Family relationships
This diagram shows the relationships between members of this clan. More...
Species distribution
Tree controls
HideThis tree shows the occurrence of the domains in this clan across different species. More...
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Structures
For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.
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