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186  structures 3351  species 0  interactions 19123  sequences 921  architectures

Clan: PapD-like (CL0556)

Summary

PapD-like superfamily,immunoglobulin-like beta sandwich Add an annotation

This superfamily is characterised by proteins in families involved in ciliary or flagellar function. The families may be acting as chaperones.

This clan contains 8 families and the total number of domains in the clan is 19123. The clan was built by P Coggill.

Members

This clan contains the following 8 member families:

ASH DUF1573 EcpB_C Motile_Sperm PapD-like PapD_N Peptidase_M60_C TMEM131_like_N

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Motile_Sperm (PF00635) 9387 (49.1%) View
DUF1573 (PF07610) 3265 (17.1%) View
ASH (PF15780) 2236 (11.7%) View
PapD_N (PF00345) 1997 (10.4%) View
TMEM131_like_N (PF12371) 1309 (6.8%) View
PapD-like (PF14874) 845 (4.4%) View
Peptidase_M60_C (PF18630) 44 (0.2%) View
EcpB_C (PF18649) 40 (0.2%) View
Total: 8 Total: 19123 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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