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86  structures 4303  species 0  interactions 11903  sequences 204  architectures

Clan: Phage_barrel (CL0504)

Summary

Phage tail beta-barrel superfamily Add an annotation

This superfamily consists of a variety of bacteriophage protein families. Structurally members of this family contain a beta barrel.

This clan contains 14 families and the total number of domains in the clan is 11903. The clan was built by A Bateman.

Members

This clan contains the following 14 member families:

Caudo_bapla16 DUF2001 DUF6558 Gifsy-2 Minor_tail_Z Phage-tail_1 Phage-tail_2 Phage-tail_3 Phage_attach Phage_GPD Prophage_tail Prophage_tailD1 Sipho_Gp37 Sipho_tail

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Phage_GPD (PF05954) 5103 (42.9%) View
Phage-tail_3 (PF13550) 2118 (17.8%) View
Sipho_tail (PF05709) 1656 (13.9%) View
Prophage_tail (PF06605) 1132 (9.5%) View
DUF2001 (PF09393) 479 (4.0%) View
Sipho_Gp37 (PF14594) 448 (3.8%) View
Prophage_tailD1 (PF18994) 363 (3.0%) View
Minor_tail_Z (PF06763) 271 (2.3%) View
DUF6558 (PF20195) 84 (0.7%) View
Phage-tail_1 (PF09097) 73 (0.6%) View
Phage-tail_2 (PF09096) 63 (0.5%) View
Caudo_bapla16 (PF16792) 47 (0.4%) View
Phage_attach (PF05354) 44 (0.4%) View
Gifsy-2 (PF13856) 22 (0.2%) View
Total: 14 Total: 11903 Clan alignment
 

Please note: Clan alignments can be very large and can cause problems for some browsers. Read the note above before viewing.

Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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