Summary
Pre-PUA superfamily
This superfamily is named after the fact that this domain is found to the N-terminus of PUA domains in some proteins. The domains in this superfamily have a cystatin like fold.
This clan contains 5 families and the total number of domains in the clan is 6223. The clan was built by A Bateman.
Members
This clan contains the following 5 member families:
DUF1947 Pre-PUA RsmF_methylt_CI TGT_C2 UPF0113_NExternal database links
SCOP: | 88802 |
Domain organisation
Below is a listing of the unique domain organisations or architectures from this clan. More...
Loading domain graphics...
Alignments
The table below shows the number of occurrences of each domain throughout the sequence database. More...
Pfam family | Num. domains | Alignment |
---|---|---|
Pre-PUA (PF17832) | 3104 (49.9%) | View |
UPF0113_N (PF17833) | 1749 (28.1%) | View |
RsmF_methylt_CI (PF17126) | 882 (14.2%) | View |
TGT_C2 (PF14810) | 396 (6.4%) | View |
DUF1947 (PF09183) | 92 (1.5%) | View |
Total: 5 | Total: 6223 | Clan alignment |
Please note: Clan alignments can be very large and can cause problems for some browsers. Read the note above before viewing.
Family relationships
This diagram shows the relationships between members of this clan. More...
Species distribution
Tree controls
HideThis tree shows the occurrence of the domains in this clan across different species. More...
Loading...
Structures
For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.
Loading structure mapping...