2H
|
CL0247 |
n/a
|
2H phosphoesterase superfamily |
2heme_cytochrom
|
CL0328 |
81342
|
Transmembrane di-heme cytochrome superfamily |
30K_movement
|
CL0571 |
n/a
|
30 kDa viral movement proteins superfamily |
4Fe-4S
|
CL0344 |
54862
|
4Fe-4S ferredoxins |
4HB_MCP
|
CL0457 |
47170
|
Aspartate chemoreceptor, signal-transduction ligand-binding |
4H_Cytokine
|
CL0053 |
47266
|
4-helical cytokine superfamily |
4PPT
|
CL0670 |
56214
|
4'-phosphopantetheinyl transferase superfamily |
5_3_exonuc_C
|
CL0464 |
47807
|
5'-3'-exonuclease C-terminal sub-region |
6PGD_C
|
CL0106 |
48179
|
6-phosphogluconate dehydrogenase C-terminal-like superfamily |
6_Hairpin
|
CL0059 |
48208
|
Six-hairpin glycosidase superfamily |
AAA_lid
|
CL0671 |
n/a
|
AAA+ ATPase lid domain superfamily |
AA_dh_N
|
CL0603 |
53223
|
Aminoacid dehydrogenase-like, N-terminal domain superfamily |
ABC-2
|
CL0181 |
n/a
|
ABC-2-transporter-like clan |
ABC_membrane
|
CL0241 |
90123
|
ABC transporter membrane domain clan |
AbiEI
|
CL0578 |
n/a
|
Antitoxin of Type IV toxin-antitoxin, Abi system |
AbrB
|
CL0132 |
54742
|
AbrB/MraZ DNA-binding domain |
AB_hydrolase
|
CL0028 |
53474
|
Alpha/Beta hydrolase fold |
AcetylDC-like
|
CL0332 |
50692
|
Acetyl-decarboxylase like superfamily |
Acetyltrans
|
CL0257 |
55729
|
N-acetyltransferase like |
ACT
|
CL0070 |
55021
|
ACT-like domain |
Actin_ATPase
|
CL0108 |
53067
|
Actin-like ATPase Superfamily |
Acyl-CoA_desat
|
CL0713 |
n/a
|
Integral membrane Acyl-coA desaturase superfamily |
Acyl-CoA_dh
|
CL0087 |
47203
|
Acyl-CoA dehydrogenase, C-terminal domain-like |
AcylCoA_ox_dh_N
|
CL0544 |
56645
|
Acyl-coenzyme A oxidase/dehydrogenase N-terminal |
Acylphosphatase
|
CL0622 |
54975
|
Acylphosphatase/BLUF domain-like superfamily |
Acyltransferase
|
CL0228 |
69593
|
Acyltransferase clan |
Acyl_transf_3
|
CL0316 |
n/a
|
Membrane acyl transferase superfamily |
ADC-like
|
CL0403 |
n/a
|
Acetoacetate decarboxylase-like |
ADF
|
CL0092 |
55753
82754
|
Actin depolymerizing Factor |
Adhesin
|
CL0204 |
49401
|
Bacterial adhesin superfamily |
ADP-ribosyl
|
CL0084 |
56399
|
ADP-ribosylation Superfamily |
AEP
|
CL0243 |
56748
|
Archaeo-eukaryotic primase |
Aerolisin_ETX
|
CL0345 |
56973
|
Aerolysin/ETX pore-forming domain superfamily |
aG_PT
|
CL0686 |
n/a
|
Alpha-glutamyl/putrescinyl thymine phosphorylase |
Aha1_BPI
|
CL0648 |
55393
|
Aha1/BPI domain-like superfamily |
AhpD-like
|
CL0423 |
69118
|
AhpD-like superfamily |
AIG2
|
CL0278 |
n/a
|
AIG2/ChaC-like superfamily |
AlbA
|
CL0441 |
82704
|
RNA-DNA binding Alba-like superfamily |
ALDC
|
CL0615 |
117856
|
ALDC superfamily |
ALDH-like
|
CL0099 |
53720
|
ALDH-like superfamily |
Alk_phosphatase
|
CL0088 |
53649
|
Alkaline phosphatase-like |
Allatostatin
|
CL0284 |
n/a
|
Allatostatin superfamily |
Amidohydrolase
|
CL0034 |
51556
|
Amidohydrolase superfamily |
AMP-binding_C
|
CL0531 |
n/a
|
AMP-binding enzyme C-terminal domain superfamily |
AmpE_CobD-like
|
CL0685 |
n/a
|
AmpE/CobD like |
AMP_N-like
|
CL0356 |
53092
|
Creatinase/prolidase N-terminal domain superfamily |
Ank
|
CL0465 |
48403
|
Ankyrin repeat superfamily |
ANL
|
CL0378 |
56801
|
ANL superfamily |
Anoctamin-like
|
CL0416 |
n/a
|
Transmembrane protein families of the Anoctamin type |
Anti-sigma_N
|
CL0645 |
89069
|
N-terminal, cytoplasmic domain of anti-sigma factor superfamily |
Antibiotic_NAT
|
CL0627 |
110710
|
DUF436/YokD-like superfamily |
Antihemostatic
|
CL0620 |
57262
|
Leech antihemostatic protein superfamily |
AOC_barrel
|
CL0650 |
141492
|
AOC barrel-like superfamily |
APC
|
CL0062 |
n/a
|
APC superfamily |
APCOP-app_sub
|
CL0545 |
55711
|
Clathrin (AP) and COPI appendage platform subdomain |
Apoptosis-Inhib
|
CL0453 |
n/a
|
Inhibitors of suppressors of apoptosis Bax/Bak |
Aquaporin-like
|
CL0716 |
n/a
|
Aquaporin-like superfamily |
ArdcN
|
CL0700 |
n/a
|
ArdcN superfamily |
Arginase
|
CL0302 |
52768
|
Arginase/deacetylase superfamily |
Arrestin_N-like
|
CL0135 |
81291
|
Arrestin_N-like |
AsmA-like
|
CL0401 |
n/a
|
AsmA-like OmpF regulator protein superfamily |
Asp-glut_race
|
CL0399 |
53681
|
Aspartate/glutamate racemase superfamily |
AT14A-like
|
CL0133 |
n/a
|
AT14A-like |
ATP-grasp
|
CL0179 |
56059
|
ATP-grasp superfamily |
ATPase_I_AtpR
|
CL0478 |
n/a
|
F-type and N-type ATPase, I/AtpR subunit |
ATP_synthase
|
CL0255 |
n/a
|
ATP synthase F0 subunit |
AVL9
|
CL0330 |
n/a
|
Late secretory pathway transport machinery |
Bacteriocin_TLN
|
CL0446 |
n/a
|
Translocation domain of colicin-like bacteriocins |
bBprotInhib
|
CL0354 |
50882
|
beta-Barrel protease inhibitors |
BCLiA
|
CL0551 |
56854
|
Bcl-2 inhibitors of programmed cell death |
BECR
|
CL0688 |
n/a
|
Barnase-EndoU-ColicinE5/D-RelE like nuclease |
BET
|
CL0665 |
n/a
|
BET superfamily |
Beta-lactamase
|
CL0013 |
56601
|
Serine beta-lactamase-like superfamily |
Beta-tent
|
CL0080 |
51316
|
Beta-tent fold |
Beta_propeller
|
CL0186 |
n/a
|
Beta propeller clan |
beta_Roll
|
CL0592 |
51120
|
beta-strand roll of R-module, superfamily |
Bet_v_1_like
|
CL0209 |
55961
|
Bet v 1 like |
BIR-like
|
CL0417 |
57925
|
BIR-like domains |
BPD_transp_1
|
CL0404 |
n/a
|
BPD transporter like |
BRCT-like
|
CL0459 |
52113
|
BRCT like |
bZIP
|
CL0018 |
n/a
|
bZIP-like leucine zipper |
B_Fructosidase
|
CL0143 |
75005
|
Beta fructosidase superfamily |
B_GA
|
CL0598 |
46997
|
Bacterial immunoglobulin/albumin-binding domain superfamily |
C1
|
CL0006 |
57889
|
Protein kinase C, C1 domain |
C1q_TNF
|
CL0100 |
49842
|
C1q and TNF superfamily |
C2
|
CL0154 |
49562
|
C2 superfamily |
C2H2-zf
|
CL0361 |
57667
|
Classical C2H2 and C2HC zinc fingers |
Cache
|
CL0165 |
n/a
|
Cache-like domain |
Calcineurin
|
CL0163 |
56300
|
Calcineurin-like phosphoesterase superfamily |
Calycin
|
CL0116 |
50814
|
Calycin superfamily |
CAP
|
CL0659 |
n/a
|
Cysteine-rich secretory proteins |
CAP_C-like
|
CL0391 |
69340
|
Adenylate cyclase associated (CAP) C terminal like |
Cargo_bd_muHD
|
CL0448 |
49447
|
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor |
Cas9_lobe
|
CL0693 |
n/a
|
Cas9 helical lobe domain |
CBD
|
CL0203 |
49384
|
Carbohydrate binding domain superfamily |
CBD9-like
|
CL0559 |
49344
|
Small molecule-binding and fam 9 carbohydrate-binding module |
CBM
|
CL0535 |
51055
|
Carbohydrate-binding superfamily |
CBM_14_19
|
CL0155 |
57625
|
Carbohydrate binding domain 14/19 clan |
CCCH_zf
|
CL0537 |
90229
|
CCCH-zinc finger |
CcdB_PemK
|
CL0624 |
50118
|
Cell growth inhibitor/plasmid maintenance toxic component superfamily |
CCT
|
CL0281 |
n/a
|
CCT like-motif |
CDA
|
CL0109 |
53927
|
Cytidine deaminase-like (CDA) superfamily |
CDC
|
CL0293 |
n/a
|
Cholesterol-dependent cytolysin superfamily |
Cdc48_2-like
|
CL0402 |
54585
|
Cdc48 domain 2-like |
CH
|
CL0188 |
47576
|
Calponin homology domain |
Chalcone-like
|
CL0560 |
54626
|
Chalcone isomerase-like superfamily |
Chaperone-J
|
CL0392 |
46565
|
Chaperone J-domain superfamily |
CHCH
|
CL0351 |
n/a
|
Coiled-coil helix coiled-coil helix superfamily |
CheC-like
|
CL0355 |
103039
|
CheC-like superfamily |
Chelatase
|
CL0043 |
53800
|
Chelatase Superfamily |
Chemosens_recp
|
CL0176 |
n/a
|
Chemosensory 7tm receptor superfamily |
CheY
|
CL0304 |
52172
|
CheY-like superfamily |
CheY-binding
|
CL0634 |
55052
|
CheY-binding domain of CheA superfamily |
Choline_binding
|
CL0694 |
n/a
|
Choline binding repeat superfamily |
CI-2
|
CL0367 |
54654
|
CI-2 family of serine protease inhibitors |
CLIP
|
CL0678 |
n/a
|
CLIP domain superfamily |
ClpP_crotonase
|
CL0127 |
52096
|
ClpP/Crotonase superfamily |
CNF1_YfiH
|
CL0663 |
n/a
|
CNF1/YfiH-like putative cysteine hydrolases |
CoA-acyltrans
|
CL0149 |
52777
|
CoA-dependent acyltransferase superfamily |
Cob_adeno_trans
|
CL0601 |
89028
|
Cobalamin adenosyltransferase-like superfamily |
Colicin_D_E5
|
CL0640 |
102824
|
Colicin D/E5 nuclease domain superfamily |
Colipase
|
CL0621 |
57190
|
Colipase-like superfamily |
ComplexI-N
|
CL0425 |
n/a
|
NADH dehydrogenase I, subunit N |
Concanavalin
|
CL0004 |
49944
|
Concanavalin-like lectin/glucanase superfamily |
CopD_like
|
CL0430 |
n/a
|
Copper resistance protein D |
COX1-like
|
CL0714 |
n/a
|
Cytochrome c oxidase subunit I-like superfamily |
CPA_AT
|
CL0064 |
n/a
|
CPA/AT transporter superfamily |
CRAL_TRIO
|
CL0512 |
52087
|
CRAL-TRIO domain superfamily |
CTC1
|
CL0586 |
n/a
|
CST, telomere maintenance, complex subunit CTC1 |
CTPT
|
CL0234 |
n/a
|
CTP transferase-like superfamily |
CuAO_N2_N3
|
CL0047 |
54416
|
Copper amine oxidase, domains 1 and 2 |
CUB
|
CL0164 |
49854
|
CUB clan |
Cupin
|
CL0029 |
51181
|
Cupin fold |
CU_oxidase
|
CL0026 |
49503
|
Multicopper oxidase-like domain |
Cyclin
|
CL0065 |
47954
|
Cyclin-like superfamily |
Cyclophil-like
|
CL0475 |
50891
|
Cyclophilin-like superfamily |
Cystatin
|
CL0121 |
54403
|
Cystatin-like superfamily |
Cystine-knot
|
CL0079 |
57501
|
Cystine-knot cytokine superfamily |
CYTH
|
CL0273 |
55154
|
CYTH-like phosphatase superfamily |
Cytochrome-c
|
CL0318 |
46626
|
Cytochrome c superfamily |
C_Lectin
|
CL0056 |
56436
|
C-type lectin-like superfamily |
DALR
|
CL0258 |
47323
|
DALR superfamily |
DAP_epimerase
|
CL0288 |
54506
|
DAP epimerase superfamily |
DBL
|
CL0195 |
n/a
|
Duff-binding like superfamily |
Death
|
CL0041 |
47986
|
Death Domain Superfamily |
Defensin
|
CL0075 |
57392
|
Defensin/myotoxin-like superfamily |
DHFred
|
CL0387 |
53597
|
Dihydrofolate reductase-like |
DHQS
|
CL0224 |
56796
|
Dehydroquinate synthase-like superfamily |
Di-copper
|
CL0205 |
48056
|
Di-copper centre-containing domain |
Dim_A_B_barrel
|
CL0032 |
54909
|
Dimeric alpha/beta barrel superfamily |
DinB
|
CL0310 |
109854
|
DinB-like superfamily |
DmpA_ArgJ
|
CL0635 |
56266
|
DmpA/ArgJ-like superfamily |
DMSO_reductase
|
CL0308 |
n/a
|
Dimethyl sulfoxide reductase type II family |
DMT
|
CL0184 |
n/a
|
Drug/Metabolite transporter superfamily |
DNA-mend
|
CL0382 |
56349
|
DNA breaking-rejoining enzyme superfamily |
DnaA_N
|
CL0494 |
n/a
|
DNA-A N-terminal domain-like superfamily |
DNase_I-like
|
CL0530 |
56219
|
DNase I-like |
DNA_b-psBarrel
|
CL0405 |
101936
|
DNA-binding pseudo-barrel domain |
DNA_clamp
|
CL0060 |
55979
|
DNA clamp superfamily |
DNA_ligase
|
CL0078 |
50249
|
DNA/RNA ligase superfamily |
DNA_pol_B-like
|
CL0194 |
56673
|
DNA polymerase B like |
DNA_primase_lrg
|
CL0242 |
n/a
|
DNA primase large subunit like |
DoxD-like
|
CL0131 |
n/a
|
DoxD-like |
DPBB
|
CL0199 |
50685
|
Double Psi beta barrel glucanase |
DsrEFH-like
|
CL0394 |
75169
|
DsrEFH-like superfamily |
DSRM
|
CL0196 |
54768
|
DSRM-like clan |
DUF1214
|
CL0528 |
n/a
|
DUF1214-like |
DUF1735
|
CL0594 |
n/a
|
DUF1735-like superfamily |
DUF362
|
CL0471 |
n/a
|
DUF362-like superfamily |
dUTPase
|
CL0153 |
51283
|
dUTPase like superfamily |
E-set
|
CL0159 |
49313
|
Ig-like fold superfamily (E-set) |
EAD1
|
CL0699 |
n/a
|
EAD1-like clan |
EDD
|
CL0245 |
n/a
|
EDD superfamily |
EF-G_C
|
CL0437 |
54980
|
Transcription elongation factor G C-terminal |
EFTPs
|
CL0575 |
50447
|
Translation proteins of Elongation Factors superfamily |
EF_hand
|
CL0220 |
47473
|
EF-hand like superfamily |
EGF
|
CL0001 |
57196
|
EGF superfamily |
eIF4e
|
CL0625 |
55418
|
eIF4e-like superfamily |
EMC6
|
CL0706 |
n/a
|
EMC6 |
EndoU
|
CL0695 |
n/a
|
EndoU-like endoribonuclease superfamily |
Enolase_N
|
CL0227 |
54826
|
Enolase N-terminal domain-like superfamily |
Enolase_TIM
|
CL0256 |
51604
|
Enolase like TIM barrel |
ENTH_VHS
|
CL0009 |
n/a
|
ENTH/ANTH/VHS superfamily |
EpsM
|
CL0331 |
103054
|
General secretion pathway protein M |
EPT_RTPC
|
CL0290 |
55205
|
EPT/RTPC-like superfamily |
EspA_CesA
|
CL0628 |
116927
|
EspA/CesA-like superfamily |
EsxAB
|
CL0352 |
140453
|
WXG100-A/WXG100-B dimer |
ETAP
|
CL0610 |
50090
|
Electron transport accessory protein superfamily |
F-box
|
CL0271 |
81383
|
F-box-like domain |
FAD-oxidase_C
|
CL0277 |
55103
|
FAD-linked oxidase C-terminal domain superfamily |
FadR-C
|
CL0388 |
48008
|
Fatty acid responsive transcription factor FadR, C-terminal domain |
FAD_DHS
|
CL0085 |
52467
|
DHS-like NAD/FAD-binding domain |
FAD_Lum_binding
|
CL0076 |
63380
|
Riboflavin synthase/Ferredoxin reductase FAD binding domain |
FAD_oxidored
|
CL0086 |
51730
|
FAD-linked oxidoreductase |
FAD_PCMH
|
CL0077 |
56176
|
PCMH-like FAD binding |
FAH
|
CL0377 |
56529
|
Fumarylacetoacetate hydrolase, C-terminal domain, superfamily |
FBA
|
CL0162 |
n/a
|
F-box associated |
FBD
|
CL0289 |
103026
|
Folate binding domain |
Fer2
|
CL0486 |
54292
|
2Fe-2S iron-sulfur cluster binding domain |
Fer2_BFD
|
CL0667 |
n/a
|
Bacterioferritin-associated ferredoxin superfamily |
FERM_M
|
CL0632 |
47031
|
FERM middle domain superfamily |
Ferritin
|
CL0044 |
47240
|
Ferritin-like Superfamily |
FF
|
CL0584 |
81698
|
FF domain |
FG_rpt
|
CL0647 |
n/a
|
Nucleoporin FG repeat |
Fibrinogen_C
|
CL0422 |
56496
|
Fibrinogen C-terminal domain-like |
FimbA
|
CL0450 |
n/a
|
Fimbriae A and Mfa superfamily |
FixH-like
|
CL0488 |
n/a
|
FixH-like |
FKBP
|
CL0487 |
54534
|
FKBP-like superfamily |
Flavoprotein
|
CL0042 |
52218
|
Flavoprotein |
FliG
|
CL0436 |
48029
|
Flagellar motor switch family |
FMN-binding
|
CL0336 |
50475
|
FMN-binding split barrel superfamily |
FMN-dep-NRtase
|
CL0529 |
55469
|
FMN-dependent nitroreductase-like |
FnI-like
|
CL0451 |
57603
|
von Willebrand Factor like superfamily |
Form_Glyc_dh
|
CL0325 |
52283
|
Formate/glycerate dehydrogenase catalytic domain-like superfamily |
Frag1-like
|
CL0412 |
n/a
|
Frag1 like |
FtsL
|
CL0225 |
n/a
|
FtsL-like superfamily |
FucI-AraA_C
|
CL0393 |
50443
|
FucI/AraA C-terminal domain-like [50443] |
FumRed-TM
|
CL0335 |
81343
|
Fumarate reductase respiratory complex transmembrane subunits |
Fungal_trans
|
CL0507 |
n/a
|
Fungal specific transcription factor domain |
FUSC
|
CL0307 |
n/a
|
Fusaric acid resistance protein-like superfamily |
Fusion_gly
|
CL0595 |
n/a
|
Fusion glycoprotein superfamily |
Fz
|
CL0644 |
63501
|
Frizzled cysteine-rich domain-related superfamily |
G-PATCH
|
CL0449 |
n/a
|
DExH-box splicing factor binding site |
G5
|
CL0593 |
n/a
|
B region of SasG biofilm-forming surface protein |
GAD
|
CL0250 |
55261
|
GAD domain superfamily |
GADPH_aa-bio_dh
|
CL0139 |
51800
|
Amino acid biosynthesis and glycosomal dehydrogenase |
GAF
|
CL0161 |
55781
|
GAF domain-like |
GAG-polyprotein
|
CL0523 |
n/a
|
LTR-copia-type polyprotein segment |
Gain
|
CL0661 |
n/a
|
GPCR autoproteolysis inducing |
Gal_mutarotase
|
CL0103 |
74650
|
Galactose Mutarotase-like superfamily |
GAP
|
CL0409 |
48350
|
GTPase activation domain superfamily |
GatB_YqeY
|
CL0279 |
89095
|
YqeY-like superfamily |
GBD
|
CL0202 |
49785
|
Galactose-binding domain-like superfamily |
GCP
|
CL0540 |
n/a
|
Gamma-tubulin complex superfamily |
gCrystallin
|
CL0333 |
49695
|
Gamma-Crystallin-like superfamily |
GCS
|
CL0286 |
55931
|
gamma-glutamylcysteine synthetase/glutamine synthetase clan |
GFP
|
CL0069 |
54511
|
GFP-like superfamily |
GF_recep_C-rich
|
CL0547 |
57184
|
Growth factor receptor Cys-rich |
GG-leader
|
CL0400 |
n/a
|
Double-Glycine leader-peptide cleavage motif |
GH57_38_middle
|
CL0599 |
88688
|
Families 57/38 glycoside transferase middle domain superfamily |
GHD
|
CL0369 |
51011
|
Glycosyl hydrolase domain superfamily |
GHMP_C
|
CL0677 |
n/a
|
GHMP C-terminal domain superfamily |
GH_CE
|
CL0158 |
88713
|
Glycoside hydrolase/deacetylase superfamily |
GIY-YIG
|
CL0418 |
82771
|
GIY-YIG endonuclease superfamily |
GlnB-like
|
CL0089 |
54913
|
GlnB-like superfamily |
Globin
|
CL0090 |
46458
|
Globin-like |
GlpM-like
|
CL0420 |
n/a
|
Bacterial membrane GlpM-like group |
Glutaminase_I
|
CL0014 |
52317
|
Class-I Glutamine amidotransferase superfamily |
Glycine-zipper
|
CL0500 |
n/a
|
Glycine-zipper TM superfamily |
Glyco_hydro_tim
|
CL0058 |
51445
|
Tim barrel glycosyl hydrolase superfamily |
Glyoxalase
|
CL0104 |
54593
|
VOC superfamily |
GME
|
CL0197 |
55909
|
GME superfamily |
GOLD-like
|
CL0521 |
101576
|
Sec14-like superfamily of golgi trafficking |
Golgi-transport
|
CL0145 |
103657
64598
|
Golgi-transport |
Golgi_traff
|
CL0456 |
n/a
|
Shuttling between cyosol and Golgi, peripheral membrane family |
GPCR_A
|
CL0192 |
81321
|
Family A G protein-coupled receptor-like superfamily |
GroES
|
CL0296 |
50129
|
GroES-like superfamily |
GST_C
|
CL0497 |
47616
|
Glutathione S-transferase, C-terminal domain |
GT-A
|
CL0110 |
53448
|
Glycosyl transferase clan GT-A |
GT-B
|
CL0113 |
53756
|
Glycosyl transferase clan GT-B |
GT-C
|
CL0111 |
n/a
|
Glycosyl transferase GT-C superfamily |
Gx_transp
|
CL0315 |
n/a
|
Gx transporter superfamily |
GYF
|
CL0673 |
n/a
|
GYF domain |
H-int
|
CL0363 |
51294
|
Hedgehog/intein (Hint) superfamily |
H2TH
|
CL0303 |
46946
|
Helix-two-turns-helix superfamily |
HAD
|
CL0137 |
56784
|
HAD superfamily |
HAMP
|
CL0681 |
n/a
|
HAMP domains |
HAS-barrel
|
CL0275 |
n/a
|
HAS-barrel superfamily |
HD_PDEase
|
CL0237 |
109604
|
HD/PDEase superfamily |
Hect
|
CL0552 |
56204
|
Hect, E3 ligase catalytic domain |
HeH
|
CL0306 |
63450
|
LEM/SAP HeH motif |
HemS_ChuX
|
CL0312 |
144064
|
Heme iron utilization protein-like superfamily |
Herpes_glyco
|
CL0146 |
n/a
|
Herpes glycoprotein |
HEXAPEP
|
CL0536 |
51161
|
Hexapeptide repeat superfamily |
Hexon
|
CL0611 |
49749
|
Hexon-like superfamily |
Hexosaminidase
|
CL0546 |
55545
|
beta-N-acetylhexosaminidase-like domain |
HHH
|
CL0198 |
n/a
|
Helix-hairpin-helix superfamily |
His-Me_finger
|
CL0263 |
54060
|
His-Me finger endonuclease superfamily |
Histone
|
CL0012 |
47113
|
Histone superfamily |
His_Kinase_A
|
CL0025 |
47384
|
His Kinase A (phospho-acceptor) domain |
His_phosphatase
|
CL0071 |
53254
|
Histidine phosphatase superfamily |
HIT
|
CL0265 |
54197
|
HIT superfamily |
HMA
|
CL0704 |
55008
|
HMA domain superfamily |
HMG-box
|
CL0114 |
47095
|
HMG-box like superfamily |
HNOX-like
|
CL0210 |
111126
|
Heme NO and oxygen binding like |
HO
|
CL0230 |
48613
|
Heme oxygenase-like superfamily |
Holin-II
|
CL0563 |
n/a
|
Bacteriophage holin superfamily II |
Holin-III
|
CL0564 |
n/a
|
Holin superfamily III |
Holin-V
|
CL0562 |
n/a
|
Holin superfamily V |
Homing_endonuc
|
CL0324 |
55608
|
Homing endonuclease-like superfamily |
HotDog
|
CL0050 |
54637
|
HotDog superfamily |
HRDC-like
|
CL0426 |
47819
|
HRDC-like superfamily |
HSP20
|
CL0190 |
49764
|
HSP20-like chaperone superfamily |
HTH
|
CL0123 |
46785
46894
88659
46689
48295
|
Helix-turn-helix clan |
HUH
|
CL0481 |
143422
|
His-hydrophobic-His tranposase Y1,Y2 superfamily |
HUP
|
CL0039 |
52403
82359
52410
52375
52394
|
HUP - HIGH-signature proteins, UspA, and PP-ATPase. |
Hy-ly_N
|
CL0372 |
48234
|
Hyaluronate lyase-like catalytic, N-terminal domain |
Hybrid
|
CL0105 |
51229
|
Barrel sandwich hybrid superfamily |
Hydrophilin
|
CL0385 |
n/a
|
Hydrophilin-like superfamily |
Hypoth_1
|
CL0447 |
n/a
|
DUF1304/DUF3784 clan |
IDO-like
|
CL0380 |
140959
|
Indolic compounds 2,3-dioxygenase-like superfamily |
Ig
|
CL0011 |
48726
|
Immunoglobulin superfamily |
IHF-likeDNA-bdg
|
CL0548 |
47729
|
IHF-like DNA-binding protein superfamily |
IIaaRS-ABD
|
CL0458 |
52954
|
Class II aaRS Anticodon-binding domain-like |
Inovirus-Coat
|
CL0371 |
57987
|
Inovirus (filamentous phage) major coat protein |
Insulin
|
CL0239 |
56994
|
Insulin-like superfamily |
Intron-mat_II
|
CL0359 |
n/a
|
Type II intron maturase-like superfamily |
Ion_channel
|
CL0030 |
81323
|
Ion channel (VIC) superfamily |
ISOCOT_Fold
|
CL0246 |
100950
|
Isomerase,CoA transferase & Translation initiation factor Superfamily |
Iso_DH
|
CL0270 |
53659
|
Isocitrate/Isopropylmalate dehydrogenase-like superfamily |
ISP-domain
|
CL0516 |
50022
|
Rieske-like iron-sulphur domain |
IT
|
CL0182 |
n/a
|
IT (Ion Transporter) superfamily |
JAB
|
CL0366 |
n/a
|
JAB-like superfamily |
KA1-like
|
CL0573 |
103243
|
Kinase associated domain 1-like |
KaiA_RbsU
|
CL0637 |
101215
|
KaiA/RbsU domain superfamily |
Kazal
|
CL0005 |
57467
|
Kazal like domain |
Keratin_assoc
|
CL0520 |
n/a
|
Keratin_associated superfamily |
KH
|
CL0007 |
54791
|
K-Homology (KH) domain Superfamily |
KIX_like
|
CL0589 |
47040
|
Kix domain of CBP (creb binding protein) and MED13/15 |
Kleisin
|
CL0157 |
n/a
|
Kleisin superfamily |
Knottin_1
|
CL0054 |
57095
|
Scorpion toxin-like knottin superfamily |
KNTase_C
|
CL0291 |
81593
|
Nucleotidyltransferase substrate binding domain |
KOW
|
CL0107 |
50104
|
KOW domain |
Kringle
|
CL0602 |
57440
|
Kringle/FnII superfamily |
l-integrase_N
|
CL0469 |
47823
|
lambda integrase N-terminal domain |
L27
|
CL0614 |
101288
|
L27 domain superfamily |
Lag3_N
|
CL0720 |
n/a
|
Lag3 N-terminal region superfamily |
LAMP
|
CL0721 |
n/a
|
LAMP superfamily |
LCCL-domain
|
CL0513 |
69849
|
LCCL-domain like |
LDH_C
|
CL0341 |
56327
|
LDH C-terminal domain-like superfamily |
LEF-8-like
|
CL0410 |
63562
|
LEF-8 like region of RNA polymerase Rpb2 |
Leu-IlvD
|
CL0364 |
52016
|
LeuD/IlvD-like |
Leukocidin
|
CL0636 |
56959
|
Leukocidin-like superfamily |
Levi_coat
|
CL0626 |
55405
|
RNA bacteriophage capsid protein superfamily |
LIG
|
CL0532 |
63707
|
Lipid-binding Ig-like superfamily |
LigB
|
CL0283 |
53214
|
LigB-like superfamily |
LisH
|
CL0561 |
n/a
|
LisH-like |
LolA_LolB
|
CL0048 |
89392
|
LolA/B superfamily |
LppaM
|
CL0421 |
n/a
|
Lipo-protein attachment motif superfamily |
LRR
|
CL0022 |
50246
|
Leucine Rich Repeat |
LTXXQ-like
|
CL0515 |
n/a
|
LTXXQ-like superfamily |
LYR-like
|
CL0491 |
n/a
|
Complex1_LYR-like superfamily |
LysE
|
CL0292 |
n/a
|
LysE transporter superfamily |
LysM
|
CL0187 |
54106
|
LysM-like domain |
Lysozyme
|
CL0037 |
53955
|
Lysozyme-like superfamily |
M6PR
|
CL0226 |
50911
|
Mannose 6-phosphate receptor |
MACRO
|
CL0223 |
52949
|
MACRO domain superfamily |
Mad2
|
CL0651 |
56019
|
Mad2 superfamily |
Maf
|
CL0269 |
52972
|
Maf/Ham1 superfamily |
Man_lectin
|
CL0568 |
51101
|
Mannoase-binding lectin superfamily |
Marvel-like
|
CL0396 |
n/a
|
MARVEL domain containing superfamily |
Matrix
|
CL0074 |
47836
|
Retroviral matrix superfamily |
MazG
|
CL0231 |
n/a
|
all-alpha NTP pyrophosphohydrolase superfamily |
MBB
|
CL0193 |
56924
|
Outer membrane beta-barrel protein superfamily |
MBD-like
|
CL0081 |
54171
|
MBD-like DNA-binding domain |
MBG
|
CL0682 |
n/a
|
Mirror Beta Grasp superfamily |
MBOAT-like
|
CL0517 |
n/a
|
Membrane-bound O-acyltransferase,MBOAT,superfamily |
MCR
|
CL0618 |
55088
|
Methyl-coenzyme M reductase subunit superfamily |
Membrane_trans
|
CL0142 |
81345
|
Membrane and transport protein |
Metallo-HOrase
|
CL0381 |
56281
|
Metallo-hydrolase/oxidoreductase superfamily |
Metallothionein
|
CL0461 |
57868
|
Metal-bound fold, usually iron, metallothionein superfamily |
Methionine_synt
|
CL0160 |
n/a
|
Cobalamin-independent synthase |
Met_repress
|
CL0057 |
47598
|
MetJ/Arc repressor, antitoxin of TA systems superfamily |
MFS
|
CL0015 |
n/a
|
Major Facilitator Superfamily |
MHC
|
CL0343 |
54452
|
MHC antigen-recognition domain |
MICOS
|
CL0683 |
n/a
|
Mitochondrial contact site complex |
MIF
|
CL0082 |
55331
|
Tautomerase/MIF superfamily |
Moesin_tail
|
CL0719 |
n/a
|
Moesin tail domain superfamily |
Mog1p_PsbP
|
CL0619 |
55724
|
Mog1p/PsbP-like superfamily |
MORN
|
CL0251 |
82186
|
MORN repeat |
MPT63-MPB63
|
CL0524 |
81982
|
Antigen MPT63/MPB63 (immunoprotective extracellular |
MTH1187-YkoF
|
CL0360 |
89957
|
MTH1187/YkoF-like superfamily |
MtN3-like
|
CL0141 |
n/a
|
MtN3-like, vesicle-trafficking cargo-receptors |
Multiheme_cytos
|
CL0317 |
48695
|
Multiheme cytochrome superfamily |
MurF-HprK_N
|
CL0365 |
63417
|
MurF and HprK N-domain-like superfamily |
MviN_MATE
|
CL0222 |
n/a
|
MviN, MATE-like superfamily |
NADP_Rossmann
|
CL0063 |
51984
51904
51971
51734
|
FAD/NAD(P)-binding Rossmann fold Superfamily |
NAD_Ferredoxin
|
CL0091 |
52343
|
Ferredoxin / Ferric reductase-like NAD binding |
NAD_kinase_C
|
CL0701 |
n/a
|
NAD-kinase beta sandwich domain superfamily |
Nckap1_CYFIP1-2
|
CL0715 |
n/a
|
Nckap1/CYFIP 1/2 superfamily |
NFACT_RNA-bind
|
CL0684 |
n/a
|
NEMF/FbpA/Caliban/Tae2 RNA binding |
NifU
|
CL0232 |
n/a
|
NifU C-terminal domain-like superfamily |
NOG1_N
|
CL0669 |
n/a
|
NOG1 N-temrinal helical domain superfamily |
NPR
|
CL0435 |
n/a
|
Nitrogen permease regulator family |
Nribosyltransf
|
CL0498 |
52309
|
N-(deoxy)ribosyltransferase-like superfamily |
NTF2
|
CL0051 |
54427
|
NTF2-like superfamily |
NTN
|
CL0052 |
56235
|
NTN hydrolase superfamily |
NTP_transf
|
CL0260 |
81301
|
Nucleotidyltransferase superfamily |
Nucleocapsid
|
CL0156 |
n/a
|
Mononegaviral nucleocapsid superfamily |
Nucleoplasmin
|
CL0055 |
88633
|
Nucleoplasmin-like/VP (viral coat and capsid proteins) superfamily |
Nucleoporin_A
|
CL0585 |
117289
|
Nucleoporin superfamily |
Nucleot_cyclase
|
CL0276 |
55073
|
Nucleotide cyclase superfamily |
NUDIX
|
CL0261 |
55811
|
NUDIX superfamily |
NusB
|
CL0633 |
48013
|
NusB-like superfamily |
NusG-like
|
CL0439 |
82679
|
NusG-like |
O-anti_assembly
|
CL0499 |
n/a
|
O-antigen assembly enzyme superfamily |
OB
|
CL0021 |
50249
|
OB fold |
OB_enterotoxin
|
CL0658 |
n/a
|
Bacterial enterotoxin OB-fold |
Omega_toxin
|
CL0083 |
57059
|
Omega toxin-like |
OML_zippers
|
CL0590 |
58042
|
Major outer membrane lipoprotein zipper superfamily |
OstA
|
CL0259 |
n/a
|
OstA superfamily |
Oxa1
|
CL0376 |
n/a
|
Cytochrome oxidase biogenesis family |
P-loop_NTPase
|
CL0023 |
52540
|
P-loop containing nucleoside triphosphate hydrolase superfamily |
p35
|
CL0672 |
49894
|
Baculovirus p35 protein superfamily |
P53-like
|
CL0073 |
49417
|
Beta-sandwich DNA-binding domain |
PA14
|
CL0301 |
n/a
|
PA14 superfamily |
PAN
|
CL0168 |
57414
|
PAN-like |
pap2
|
CL0525 |
48317
|
Acid phosphatase/Vanadium-dependent haloperoxidase |
PapD-like
|
CL0556 |
49354
|
PapD-like superfamily,immunoglobulin-like beta sandwich |
Paramyxovirin_C
|
CL0577 |
n/a
|
C protein of Paramyovirinae families |
ParBc
|
CL0248 |
110849
|
ParB-like superfamily |
PAS_Fold
|
CL0183 |
55785
|
PAS domain clan |
Patatin
|
CL0323 |
52151
|
Patatin/FabD/lysophospholipase-like superfamily |
PAZ
|
CL0638 |
101690
|
PAZ domain superfamily |
PBP
|
CL0177 |
n/a
|
Periplasmic binding protein clan |
PDDEXK
|
CL0236 |
52980
|
PD-(D/E)XK nuclease superfamily |
PDZ-like
|
CL0466 |
50156
|
PDZ domain-like peptide-binding superfamily |
Pec_lyase-like
|
CL0268 |
51126
|
Pectate lyase-like beta helix |
PELOTA
|
CL0101 |
55315
|
Pelota - RNA ribose binding superfamily |
Pentapeptide
|
CL0505 |
141571
|
Pentapeptide repeat |
PEP-carboxyk
|
CL0374 |
53795
|
PEP carboxykinase-like superfamily |
PepSY
|
CL0320 |
n/a
|
PepSY domain-like superfamily |
PepSY_TM-like
|
CL0490 |
n/a
|
PepSY_TM-like |
Peptidase_AA
|
CL0129 |
50630
|
Peptidase clan AA |
Peptidase_AD
|
CL0130 |
n/a
|
Peptidase clan AD |
Peptidase_CA
|
CL0125 |
54001
|
Peptidase clan CA |
Peptidase_CD
|
CL0093 |
52129
|
Peptidase clan CD |
Peptidase_MA
|
CL0126 |
55486
|
Peptidase clan MA |
Peptidase_MD
|
CL0170 |
55166
|
Peptidase MD |
Peptidase_ME
|
CL0094 |
63411
|
LuxS/MPP-like metallohydrolase |
Peptidase_MH
|
CL0035 |
53187
|
Peptidase clan MH/MC/MF |
Peptidase_ML
|
CL0095 |
53163
|
Peptidase Clan ML |
Peptidase_PA
|
CL0124 |
50494
|
Peptidase clan PA |
Peptidase_SF
|
CL0299 |
51306
|
Peptidase clan SF |
Peptidase_SH
|
CL0201 |
50789
|
Peptidase clan SH |
Peptidase_U
|
CL0472 |
n/a
|
Peptidase clan U |
Pept_Inhib_IE
|
CL0096 |
57027
|
Peptidase Inhibitor Clan IE |
Perilipin_sf
|
CL0718 |
n/a
|
Perilipin superfamily |
Periplas_BP
|
CL0144 |
53822
|
Periplasmic binding protein like |
Peroxidase
|
CL0617 |
48113
|
Heme-dependent peroxidases superfamily |
Peroxisome
|
CL0484 |
n/a
|
Peroxisome-like domain |
PF
|
CL0431 |
55770
103196
|
Profilin-like superfamily |
PFK
|
CL0240 |
53784
111331
|
PFK-like superfamily |
PFL-like
|
CL0339 |
51998
|
PFL-like glycyl radical enzyme superfamily |
PgaPase
|
CL0379 |
53182
|
Pyroglutamate aminopeptidase superfamily |
PGBD
|
CL0244 |
47090
|
PGBD superfamily |
PH
|
CL0266 |
50729
|
PH domain-like superfamily |
Phage-coat
|
CL0373 |
n/a
|
Phage coat superfamily |
Phage_barrel
|
CL0504 |
69279
|
Phage tail beta-barrel superfamily |
Phage_fibre
|
CL0606 |
69349
|
Phage fibre superfamily |
Phage_TACs
|
CL0567 |
n/a
|
Phage tail assembly chaperone |
Phage_tail
|
CL0348 |
n/a
|
Phage virion morphogenesis superfamily |
Phage_tail_2
|
CL0691 |
n/a
|
Phage tail like superfamily |
Phage_tail_L
|
CL0249 |
n/a
|
Phage minor tail protein L clan |
Phage_TTPs
|
CL0569 |
n/a
|
Phage tail tube proteins superfamily |
PheT-TilS
|
CL0383 |
56037
|
Phenylalanine- and lysidine-tRNA synthetase domain superfamily |
PHM_PNGase_F
|
CL0612 |
49742
|
PHM/PNGase F superfamily |
PhosC-NucP1
|
CL0368 |
48537
|
Phospholipase C/P1 nuclease superfamily |
Phosphatase
|
CL0031 |
52799
|
Phosphatase superfamily |
Phospoesterase
|
CL0171 |
56655
|
inositol polyphosphate 1 phosphatase like superfamily |
PhoU
|
CL0297 |
109755
|
PhoU-like superfamily |
PilP
|
CL0655 |
n/a
|
GspC HR domain/PilP-like superfamily |
Pilus
|
CL0327 |
54523
|
Pilus subunit |
PIN
|
CL0280 |
88723
|
PIN domain superfamily |
PKinase
|
CL0016 |
n/a
|
Protein kinase superfamily |
PK_TIM
|
CL0151 |
51621
51645
|
Pyruvate kinase-like TIM barrel superfamily |
PLA2
|
CL0629 |
48619
|
Phospholipase A2 superfamily |
Plasmid-antitox
|
CL0136 |
n/a
|
Plasmid toxin-antitoxin system |
PLAT
|
CL0321 |
n/a
|
PLAT domain like superfamily |
PLC
|
CL0384 |
51695
|
PLC-like phosphodiesterases |
PLD
|
CL0479 |
56024
|
Phospholipase D superfamily |
PLP_aminotran
|
CL0061 |
53383
|
PLP dependent aminotransferase superfamily |
Polo-box
|
CL0708 |
n/a
|
Polo-box superfamily |
post-AAA
|
CL0604 |
48019
|
post-AAA+ oligomerization domain-like superfamily |
Post-HMGL
|
CL0597 |
89000
|
Post-HMGL domain-like superfamily |
POTRA
|
CL0191 |
n/a
|
POTRA domain superfamily |
POZ
|
CL0033 |
54695
|
POZ domain superfamily |
PP-binding
|
CL0314 |
47336
|
ACP-like superfamily |
PP2C
|
CL0238 |
81606
|
PP2C-like superfamily |
PPP-I
|
CL0570 |
54897
|
Protease propeptides/inhibitors |
PRC-barrel
|
CL0350 |
50346
|
PRC-barrel like superfamily |
PRD
|
CL0166 |
63520
|
PRD domain superfamily |
Pre-PUA
|
CL0668 |
88802
|
Pre-PUA superfamily |
PreATP-grasp
|
CL0483 |
52440
|
Probable substrate-binding preceding ATP-grasp domain |
Prefoldin
|
CL0200 |
46579
|
Prefoldin |
Prolamin
|
CL0482 |
n/a
|
Prolamin |
PRTase-like
|
CL0533 |
53271
|
PRPP synthetase-associated protein 1 |
PseudoU_synth
|
CL0649 |
55120
|
Pseudouridine synthase superfamily |
PSI
|
CL0630 |
103575
|
Plexin fold superfamily |
PspA
|
CL0235 |
n/a
|
PspA/ESCRT-III |
PTase-anion_tr
|
CL0340 |
55804
|
Phosphotransferase/anion transport protein superfamily |
PTH2
|
CL0305 |
102462
|
Peptidyl-tRNA hydrolase II superfamily |
PTS_EIIC
|
CL0493 |
n/a
|
Phosphotransferase system, EIIC superfamily |
PUA
|
CL0178 |
n/a
|
PUA/ASCH superfamily |
PUP
|
CL0408 |
53167
|
Purine and uridine phosphorylase superfamily |
RAMPS-Cas5-like
|
CL0362 |
n/a
|
CRISPR-associated (Cas) Repair Associated Mysterious Proteins |
RAS_GEF_N
|
CL0542 |
48366
|
Ras guanyl-nucleotide exchange factor activity N-term |
RBP11-like
|
CL0509 |
55257
|
RBP11-like subunits of RNA polymerase |
RdRP
|
CL0027 |
56695
|
RNA dependent RNA polymerase |
Reductase_C
|
CL0608 |
55424
|
FAD/NAD-linked reductase C-terminal domain superfamily |
Reo_sigma
|
CL0326 |
49835
|
Virus attachment protein superfamily |
Rep
|
CL0169 |
55464
|
Rep-like domain |
Retroviral_zf
|
CL0511 |
57756
|
Retrovirus zinc finger-like domains |
RF
|
CL0337 |
50475
|
Release factor superfamily |
RGS
|
CL0272 |
48097
|
RGS-like superfamily |
Rhomboid-like
|
CL0207 |
n/a
|
Integral membrane protein / protease |
Ribokinase
|
CL0118 |
53613
|
Ribokinase-like superfamily |
Ribos_L15p_L18e
|
CL0588 |
52080
|
Ribosomal proteins L15 bacteria, L18e archaea |
Ribo_L29
|
CL0346 |
46561
|
Ribosomal protein L29, L29p, superfamily |
RIIa
|
CL0068 |
47391
|
RIIa-like fold |
RING
|
CL0229 |
57850
|
Ring-finger/U-box superfamily |
RMMBL_DRMBL
|
CL0398 |
n/a
|
RNA/DNA-metabolising metallo-beta-lactamase motif |
RNase_H
|
CL0219 |
53098
|
Ribonuclease H-like superfamily |
RNase_III
|
CL0539 |
69065
|
RNase III domain-like superfamily |
RND_permease
|
CL0322 |
n/a
|
RND permease superfamily |
Rof
|
CL0639 |
101744
|
Rof/RNase P subunit-like superfamily |
Rotavirus_VP7
|
CL0217 |
n/a
|
Rotavirus VP7 protein |
RRM
|
CL0221 |
54928
|
RRM-like clan |
Rubredoxin
|
CL0045 |
57802
|
Rubredoxin-like |
S11_L18p
|
CL0267 |
53137
|
Ribosomal protein S11/L18p superfamily |
S15_NS1
|
CL0600 |
47060
|
S15/NS1 RNA-binding domain superfamily |
S24e_L23_L15e
|
CL0652 |
54189
|
Ribosomal S24e, L23 and L15e superfamily |
S4
|
CL0492 |
55174
|
S4 domain superfamily |
S5
|
CL0329 |
54211
|
Ribosomal protein S5 domain 2-like superfamily |
SAF
|
CL0489 |
51269
|
SAF-like beta clip superfamily |
SAM
|
CL0003 |
47773
|
Sterile Alpha Motif (SAM) domain |
Saposin_like
|
CL0707 |
47862
|
Saposin-like superfamily |
SCP2
|
CL0311 |
55718
|
SCP-2 sterol transfer superfamily |
SDH_beta
|
CL0697 |
n/a
|
Serine dehydratase beta chain superfamily |
Sec10
|
CL0294 |
n/a
|
Sec10-like superfamily |
Serum_albumin
|
CL0282 |
48552
|
Serum albumin superfamily |
SGNH_hydrolase
|
CL0264 |
52266
|
SGNH hydrolase superfamily |
SH2-like
|
CL0541 |
55550
|
SH2, phosphotyrosine-recognition domain superfamily |
SH3
|
CL0010 |
50044
|
Src homology-3 domain |
ShK-like
|
CL0213 |
57546
|
Sea anemone toxin k like |
SHOCT
|
CL0660 |
n/a
|
SHOCT superfamily |
SHS2
|
CL0319 |
55135
88797
69818
|
SHS2 domain |
Sialidase
|
CL0434 |
50939
|
Sialidase superfamily |
SICA_like
|
CL0474 |
n/a
|
SICA alpha/beta like extracellular domains |
SIS
|
CL0067 |
53697
|
SIS domain fold |
SLATT
|
CL0676 |
n/a
|
SMODS and LOG-Smf/DprA-Associating Two TM |
SLOG
|
CL0349 |
102405
|
SMF/DprA-LOG (SLOG) |
Sm-like
|
CL0527 |
n/a
|
Sm (Small RNA binding protein domain) |
SMAD-FHA
|
CL0357 |
49879
|
SMAD/FHA domain superfamily |
SNARE
|
CL0212 |
64356
|
SNARE-like superfamily |
SNARE-fusion
|
CL0445 |
58038
|
SNARE-fusion membrane complex superfamily |
SOCS_box
|
CL0642 |
158235
|
SOCS-box like superfamily |
SOR
|
CL0503 |
49367
|
Superoxide reductase-like superfamily |
sPC4_like
|
CL0609 |
54447
|
PC4-like superfamily |
SPFH
|
CL0433 |
117892
|
SPFH superfamily |
SPOC
|
CL0616 |
100939
|
SPOC domain-like superfamily |
SPOUT
|
CL0098 |
75217
|
SPOUT Methyltransferase Superfamily |
SRCR
|
CL0550 |
56487
|
SRCR-like |
SRP9_14
|
CL0623 |
54762
|
SRP alu RNA binding heterodimer, SRP9/14 superfamily |
ssDNA_NP_VP
|
CL0605 |
88645
|
ssDNA viruses Nucleoplasmin-like/VP coat superfamily |
STAND_N
|
CL0587 |
n/a
|
N-terminal of fungal STAND proteins superfamily |
STARBD
|
CL0576 |
49452
|
Starch-binding domain like superfamily |
STAS
|
CL0502 |
52091
|
STAS domain superfamily |
Steroid_dh
|
CL0115 |
n/a
|
Steroid oxidoreductase superfamily |
STING
|
CL0709 |
n/a
|
STING domain superfamily |
STIR
|
CL0173 |
52200
|
STIR superfamily |
Succ_CoA_synth
|
CL0506 |
52210
|
Succinyl-CoA synthetase flavodoxin domain superfamily |
SufE_NifU
|
CL0233 |
82649
|
SufE/NifU superfamily |
SUKH
|
CL0526 |
n/a
|
SUKH superfamily |
T3SS
|
CL0646 |
140591
|
Type III secretion system domain superfamily |
T3SS-Chaperone
|
CL0419 |
n/a
|
Type III secretion system types a and b chaperone |
T3SS-hook
|
CL0424 |
n/a
|
Type III secretion system-derived superfamily, hook-related |
TACC
|
CL0679 |
n/a
|
Transforming acidic coiled-coil |
Tad-like
|
CL0496 |
n/a
|
Flp pilus-biogenesis Tad-like superfamily |
TAT
|
CL0300 |
n/a
|
Twin-Arginine Translocation Motif |
TBP-like
|
CL0407 |
55945
|
TATA-binding protein like |
TerB
|
CL0414 |
n/a
|
Tellurits and antibiotic resistance superfamily |
Terp_synthase
|
CL0613 |
48576
|
Terpenoid synthases superfamily |
Tetraspannin
|
CL0347 |
48652
|
Tetraspannin-like |
TetR_C
|
CL0174 |
48498
|
TetR protein, C-terminal domain-like |
THBO-biosyn
|
CL0334 |
55620
|
Tetrahydrobiopterin biosynthesis-like enzyme superfamily |
THDP-binding
|
CL0254 |
88735
52518
|
Thiamin diphosphate-binding superfamily |
Thiolase
|
CL0046 |
53901
|
Thiolase-like Superfamily |
Thioredoxin
|
CL0172 |
52833
|
Thioredoxin-like |
ThrE
|
CL0470 |
n/a
|
Threonine/Serine exporter ThrE superfamily |
TIKI
|
CL0572 |
159501
|
Tiki-like, or EreA-ChaN-like 2His 2Glu metallopreotease SF |
TIMP-like
|
CL0353 |
50242
|
TIMP-like superfamily |
TIM_barrel
|
CL0036 |
51395
63892
51351
51391
51412
51419
51690
51366
|
Common phosphate binding-site TIM barrel superfamily |
TKC_like
|
CL0591 |
52921
|
Transketolase C-terminal domain-like superfamily |
TNF_receptor
|
CL0607 |
57586
|
TNF receptor-like superfamily |
TolA-TonB-Cterm
|
CL0428 |
74653
74652
|
TolA/TonB C-terminal |
TolB_N
|
CL0342 |
52964
|
TolB, N-terminal domain |
Toprim-like
|
CL0413 |
110455
|
Toprim domain |
TPA-repeat
|
CL0462 |
n/a
|
Transcription elongation factor C-terminal nonapeptide repeat |
TPR
|
CL0020 |
48452
|
Tetratrico peptide repeat superfamily |
TRAF
|
CL0389 |
49599
|
TRAF domain-like superfamily |
Traffic
|
CL0147 |
n/a
|
Trafficking protein |
Transporter
|
CL0375 |
n/a
|
Transporter-like superfamily, four TM region |
Transthyretin
|
CL0287 |
49482
49479
49472
|
Transthyretin superfamily |
TRASH
|
CL0175 |
n/a
|
TRASH superfamily |
TRB
|
CL0206 |
50037
|
Transcriptional repressor beta-barrel domain |
TrbC_VirB2
|
CL0690 |
n/a
|
TrbC/VirB2 pilin superfamily |
TrbL
|
CL0698 |
n/a
|
TrbL/VirB6 plasmid conjugal transfer protein |
TRD
|
CL0477 |
116734
|
DNA methylase specificity domain |
Trefoil
|
CL0066 |
50352
|
Beta-trefoil superfamily |
Trigger_C
|
CL0262 |
n/a
|
Trigger factor/SurA domain |
Triple_barrel
|
CL0662 |
50916
|
Triple barrel superfamily |
Triple_B_spiral
|
CL0674 |
51225
|
Triple beta spiral |
TrkA_C
|
CL0582 |
116725
|
TrkA C-terminal domain-like |
tRNA-IECD_N
|
CL0476 |
55267
|
tRNA-intron endonuclease catalytic domain-like N-term |
tRNA_bind_arm
|
CL0298 |
46589
|
tRNA-binding arm superfamily |
tRNA_synt_II
|
CL0040 |
52375
|
Class II aminoacyl-tRNA and Biotin synthetases |
Tropomyosin-lke
|
CL0452 |
57997
|
Tropomyosin-like superfamily |
TSP1
|
CL0692 |
82895
|
TSP1 superfamily |
TSP3
|
CL0689 |
n/a
|
Thrombospondin type 3 repeat superfamily |
Tubby_C
|
CL0395 |
54518
|
Tubby C-terminal domain-like |
Tubulin
|
CL0566 |
524907
|
Tubulin nucleotide-binding domain-like, GTPase |
Tubulin_C
|
CL0442 |
55307
|
Tubulin, FtsZ and Misato and their C-termini, |
Tudor
|
CL0049 |
54160
|
Tudor domain 'Royal family' |
TusA-like
|
CL0397 |
64307
|
TusA-like superfamily |
TypeIII_Chap
|
CL0097 |
69635
|
Type III secretory system chaperone |
UB2H
|
CL0664 |
n/a
|
UB2H/UvrB interaction domain superfamily |
UBA
|
CL0214 |
46934
46929
|
UBA superfamily |
UBC
|
CL0208 |
54495
|
Ubiquitin conjugating enzyme like superfamily |
Ubiquitin
|
CL0072 |
81271
54285
54277
54236
|
Ubiquitin superfamily |
UcrQ-like
|
CL0429 |
81508
|
UcrQ-like |
UIM
|
CL0702 |
54236
|
Ubiquitin interacting motif |
uPAR_Ly6_toxin
|
CL0117 |
57302
|
uPAR/Ly6/CD59/snake toxin-receptor superfamily |
Uteroglobin
|
CL0370 |
48201
|
Uteroglobin-like superfamily |
UTRA
|
CL0122 |
64288
|
Chorismate lyase/UTRA superfamily |
Vault
|
CL0666 |
n/a
|
Major Vault Protein repeat superfamily |
VBS-like
|
CL0705 |
47220
|
VBS-like four-helical bundle superfamily |
VCCI
|
CL0653 |
49889
|
VCCI superfamily superfamily |
Vir
|
CL0411 |
n/a
|
Antigenic variants from Plasmodium cell-surface |
Viral_Gag
|
CL0148 |
58630
47353
|
Viral Gag protein |
Viral_gly_cn_dm
|
CL0543 |
56983
|
Viral glycoprotein central and dimerisation domains |
Viral_NABP
|
CL0140 |
n/a
|
Viral nucleic acid binding |
Vmethyltransf
|
CL0696 |
n/a
|
Viral methyltranferase superfamily |
VPS23_C
|
CL0596 |
140111
|
Endosomal sorting complex assembly domain |
Vps51
|
CL0295 |
n/a
|
Vps51 domain superfamily |
VSA
|
CL0656 |
n/a
|
Variant surface antigens |
vWA-like
|
CL0128 |
53300
|
von Willebrand factor type A |
WRKY-GCM1
|
CL0274 |
90073
|
WRKY-GCM1 superfamily |
WW
|
CL0680 |
n/a
|
WW domain |
WYL
|
CL0654 |
n/a
|
WYL-like superfamily |
YbaB
|
CL0717 |
n/a
|
YbaB superfamily |
YbjQ-like
|
CL0522 |
117782
|
YbjQ-like superfamily |
YeeE
|
CL0710 |
n/a
|
YeeE-like transporter superfamily |
YgaC_TfoX-N
|
CL0631 |
159894
|
YgaC/TfoX-N like superfamily |
Yip1
|
CL0112 |
n/a
|
Yip1/YIF1-like |
YjbJ-CsbD-like
|
CL0406 |
69047
|
YjbJ-CsbD-like superfamily |
YjgF-like
|
CL0534 |
55298
|
YjgF-like superfamily |
YkuD
|
CL0508 |
141523
|
L,D-transpeptidase catalytic domain |
YqbG
|
CL0643 |
116915
|
YqbG-like superfamily |
YqgF
|
CL0580 |
n/a
|
YqgF-like family |
YtcA
|
CL0703 |
n/a
|
YtcA-like superfamily |
YycI_YycH
|
CL0285 |
n/a
|
YycI/YycH superfamily |
zf-FYVE-PHD
|
CL0390 |
57903
|
FYVE/PHD zinc finger superfamily |
Zn_Beta_Ribbon
|
CL0167 |
57783
|
Zinc beta-ribbon |
Zn_chelatase
|
CL0687 |
n/a
|
Zinc chelating superfamily |