# STOCKHOLM 1.0 #=GF ID PapG_N #=GF AC PF03627.16 #=GF DE PapG carbohydrate binding domain #=GF AU Finn RD;0000-0001-8626-2148 #=GF SE Pfam-B_3074 (release 7.0) #=GF GA 25.00 25.00; #=GF TC 39.80 39.00; #=GF NC 23.70 23.40; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 61295632 -E 1000 --cpu 4 HMM pfamseq #=GF TP Domain #=GF CL CL0204 #=GF RN [1] #=GF RM 11454740 #=GF RT The solution structure of PapGII from uropathogenic Escherichia #=GF RT coli and its recognition of glycolipid receptors. #=GF RA Sung MA, Fleming K, Chen HA, Matthews S; #=GF RL EMBO Rep 2001;2:621-627. #=GF RN [2] #=GF RM 11440716 #=GF RT Structural basis of the interaction of the pyelonephritic E. #=GF RT coli adhesin to its human kidney receptor. #=GF RA Dodson KW, Pinkner JS, Rose T, Magnusson G, Hultgren SJ, Waksman #=GF RA G; #=GF RL Cell 2001;105:733-743. #=GF DR INTERPRO; IPR005310; #=GF DR SCOP; 1j8r; fa; #=GF DR SCOP; 1j8s; fa; #=GF DR SO; 0000417; polypeptide_domain; #=GF CC PapG, the adhesin of the P-pili, is situated at the tip and is #=GF CC only a minor component of the whole pilus structure. A #=GF CC two-domain structure has been postulated for PapG; a #=GF CC carbohydrate binding N-terminus (this domain) and chaperone #=GF CC binding C-terminus. The carbohydrate-binding domain interacts #=GF CC with the receptor glycan [1,2]. #=GF SQ 4 #=GS Q9AIS9_ECOLX/1-226 AC Q9AIS9.1 #=GS Q9APE7_ECOLX/1-226 AC Q9APE7.1 #=GS Q9L6E1_ECOLX/1-225 AC Q9L6E1.1 #=GS Q47444_ECOLX/1-226 AC Q47444.1 Q9AIS9_ECOLX/1-226 MKKWFPAFLF.LSLSGGNDALAGWHNVMFYAFNDYLTTNAGNVKVIDQPQLYIPWNTGSATAT..YYSCSGPEFASG..VYFQEYLAWMVVPKHVYTNEGFNIFLDVQSKYGWSMENENDKDFYFFDNGYEWDTWTNNGARICFYPGNMNQLNNKFNDLVFRVFLPVDLPKGHYNFPCRYIRGIQHHYYDFWQDHYKMPYDQIKQLPATNTIDVSIDNVGECQPSTQVFNI Q9APE7_ECOLX/1-226 MKKWFPAFLF.LSLSGCNDALAGWHNVMFYAFNDYSGYDSGNMTIFDRGQFTIPWKTGAASAI..YSSCQTPEFVSG..VYFQEYIAWVLVPRSTQTTDRYTVFFDVYSKYGWNQENTGDYGYYYFLNGYEWDTWTSDGGRVCAPVGNTKQLSNTFNELRFSLLLPADLPKGRYEVPIKYIRGIQHHYYNGWREHYKMPYSQVKQLPATNTLMLSFNNTGSCRPSAQSLEI Q9L6E1_ECOLX/1-225 MKKWLPAFLF.LSLSGCNDALAANQSTMFYSFNDNIYRPQLSVKVTDIVQFIVDINSASSTATLSYVACNGFTWTHG..LYWSEYFAWLVVPKHV.SYNGYNIYLELQSKGGFSLDAE.DNDNYYLTKGFAWDE.VNSSGRVCFDIGEKRSLAWSFGGVTLNARLPVDLPKGDYTFPVKFLRGIQRNNYDYIGGRYKIPSSLMKTFPFNGTLNFSIKNTGGCRPSAQSLEI Q47444_ECOLX/1-226 MKKWFPALLFSLCVSGESSA...WNNIVFYSLGDVNSYQGGNVVITQRPQFITSWRPGIATVT..WNQCNGPEFADGFWAYYREYIAWVVFPKKVMTQNGYPLFIEVHNKGSWSEENTGDNDSYFFLKGYKWDERAFDTANLCQKPGEKKRLTEKFDDIIFKVALPADLPLGNYSVKIPYTSGMQRHFASYLGARFKIPYNVAKTLPRENEMLFLFKNIGGCRPSAQSLEI #=GC seq_cons MKKWFPAFLF.LSLSGsNDALAuWpNlMFYuFNDh.shsuGNVplhDpsQFhlsWpoGuATAT..YsuCsGPEFssG..lYapEYlAWlVVPK+V.TpsGYslFl-VpSKhGWS.ENpsDpD.YaFhpGYcWDphsssuuRlCh.sGpp+pLsppFs-lhFplhLPsDLPKGcYshPl+YlRGIQ+HaYsahts+YKhPYs.hKpLPtsNTl.hShcNsGuCRPSAQSLEI //