# STOCKHOLM 1.0
#=GF ID   MRP-L47
#=GF AC   PF06984.16
#=GF DE   Mitochondrial 39-S ribosomal protein L47 (MRP-L47)
#=GF AU   Vella Briffa B;0000-0003-4380-1783
#=GF SE   Pfam-B_6890 (release 10.0)
#=GF GA   27.00 27.00;
#=GF TC   27.00 28.20;
#=GF NC   26.90 26.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 61295632 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF CL   CL0346
#=GF RN   [1]
#=GF RM   9445368
#=GF RT   Mitochondrial ribosomal proteins (MRPs) of yeast. 
#=GF RA   Graack HR, Wittmann-Liebold B; 
#=GF RL   Biochem J 1998;329:433-448.
#=GF DR   INTERPRO; IPR010729;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family represents the N-terminal region (approximately 8
#=GF CC   residues) of the eukaryotic mitochondrial 39-S ribosomal protein
#=GF CC   L47 (MRP-L47). Mitochondrial ribosomal proteins (MRPs) are the
#=GF CC   counterparts of the cytoplasmic ribosomal proteins, in that they
#=GF CC   fulfil similar functions in protein biosynthesis. However, they
#=GF CC   are distinct in number, features and primary structure [1].
#=GF SQ   8
#=GS Q94JQ7_ARATH/38-124  AC Q94JQ7.1
#=GS RM47_MOUSE/66-151    AC Q8K2Y7.2
#=GS Q9XZY7_LEIMA/13-101  AC Q9XZY7.1
#=GS Q27370_DROME/14-98   AC Q27370.1
#=GS Q8T3V6_DROME/59-144  AC Q8T3V6.1
#=GS O97270_PLAF7/18-109  AC O97270.2
#=GS RM04_YEAST/68-159    AC P36517.2
#=GS RM04_SCHPO/38-127    AC P87232.1
Q94JQ7_ARATH/38-124             LEEFFEF.....DRS..QDEDKPV.VYG...RGWKASELRLKSWDDLQKLWYVLLKEKNMLMTQRQMLQAQNMQ...FPNPERIPKVRRSMCRIKHVLTER
RM47_MOUSE/66-151               LEEFFDD.....PKNW..GEEK.V.KSG...ASWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQRLP...MPSPERLEKVVDSMDNVDKVVQER
Q9XZY7_LEIMA/13-101             LYEFVDGNFLNNKRP.........AIPG...GAWPLESLRRKSLADLQQIWLSLLKERNMLSTIKEHYLRHQEELGAMPAPSRLKMVEESMENVKRVVKER
Q27370_DROME/14-98              LMEFFDD.....KKNW..SENE.V.KVGRAGHGGAAYQVQQGAAPAVVR....APQGSNMLLTMEHECNDKMEV...FPSPERIDKVKISMENLETVVRER
Q8T3V6_DROME/59-144             LMEFFDD.....KKNW..SENE.V.KVG...RAWRTEELRIKSNKELHQLWFVLLKERNMLLTMEHECNDKMEV...FPSPERIDKVKISMENLETVVRER
O97270_PLAF7/18-109             IEELWENSFLDNNVDMKKIEYS...KTG...DAWPCVLLRKKSFEDLHKLYYICLKEKNKLLGEQYFHLQNSTK...MLQHGRLKKVKLTMKRILTVLSRR
RM04_YEAST/68-159               LWQFFSNKKFIRSADDLPPSSH........IRPWSIPELRHKSFNDLHSLWYNCLREQNVL.ARENHLLKNIVGSTHDEFSELSNSIRTTMWQIRHVLNER
RM04_SCHPO/38-127               LWNFFRD.....KQALPPPSEE.A.KFG...RAWAAEELRWKSFNDLHGLWYNCLREKNLLFTQRAEMKRLQLT.IPKASNERVLAVNKTMAAIKFVLWER
#=GC seq_cons                   LhEFF-s.....c+sh..sEpc.s.KsG...+uWssppLRpKShsDLHpLWYshLKE+NMLhThcpchpcpphs...hPuPERlcKV+pSMcslcpVlpER
//