# STOCKHOLM 1.0
#=GF ID   DUF1833
#=GF AC   PF08875.14
#=GF DE   Domain of unknown function (DUF1833)
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   PSI2 target BIG_61
#=GF GA   21.00 21.00;
#=GF TC   21.00 21.00;
#=GF NC   20.90 20.60;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 61295632 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF CL   CL0249
#=GF RN   [1]
#=GF RM   16859499
#=GF RT   The prokaryotic antecedents of the ubiquitin-signaling system
#=GF RT   and the early evolution of ubiquitin-like beta-grasp domains. 
#=GF RA   Iyer LM, Burroughs AM, Aravind L; 
#=GF RL   Genome Biol. 2006;7:R60.
#=GF DR   INTERPRO; IPR014974;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family of proteins are functionally uncharacterised and are
#=GF CC    predicted to adopt an all-beta fold [1]. They are often found
#=GF CC   in gene neighborhoods containing genes for an NlpC peptidase and
#=GF CC   a  Ubiquitin domain predicted to be involved in tail assembly
#=GF CC   [1]. 
#=GF SQ   3
#=GS Q88MJ3_PSEPK/2-148  AC Q88MJ3.1
#=GS Q6LHT4_PHOPR/8-149  AC Q6LHT4.1
#=GS V6F5D3_MAGGM/9-164  AC V6F5D3.1
Q88MJ3_PSEPK/2-148             SILKRLYASSGPEIIHEVLEIT..DGITTYWMTKGWDELTITLET......GQVVVCTPCGMDLALPARNDDGTQDLTFALSNIDGIASGFVRAALRDGRRMSLVYRAYTSDDLGAPA.HAPHRFKIKGGSVTAAQVSVTAGYFDLLDTRWPRNTY
Q6LHT4_PHOPR/8-149             NARINLNATTADEPFLILVEIHHQSFSEPARIVADTQDITHAGYR...........YTALPIDVTLPDEGEGKLPQAKLIIDNVGRVLTDEIDGTRGFE...GGTCVIMQVMRSNPSHVEWGIELDVLDVSIDQLKISATLGYEDMLNKPAVTMRF
V6F5D3_MAGGM/9-164             ALKEAFASAPAGTVILDTLEIWHPTFDEPIRVVRDHADLTARLEAGAPRDGGKRVTFAALAFEFSPPPVDTAPVPEITVTLDNVGSDITDALEGAAVSQQVIEITWRPYLSTDLNGPHMDPPITMTLTDVEADTMRVTGRARMLDAGNKSFPSITY
#=GC seq_cons                  ul+csLsAooAsElIL-lLEIaH.oFsEPhRlV+DasDLTtsLEs......GphVsaTALuhDloLPscs-uslP-lTlsLDNVGullTDtl-GAtsspphhulTaRsYpSsDLNuPHh-sPIchclpDVSlDsh+VSuTAGYhDhLNKsaPohTY
//