# STOCKHOLM 1.0 #=GF ID Flavodoxin_4 #=GF AC PF12682.10 #=GF DE Flavodoxin #=GF AU Mistry J;0000-0003-2479-5322 #=GF SE Manual #=GF GA 24.00 24.00; #=GF TC 24.00 24.00; #=GF NC 23.80 23.90; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 61295632 -E 1000 --cpu 4 HMM pfamseq #=GF TP Domain #=GF CL CL0042 #=GF DR INTERPRO; IPR008254; #=GF DR SO; 0000417; polypeptide_domain; #=GF CC This is a family of flavodoxins. Flavodoxins are electron #=GF CC transfer proteins that carry a molecule of non-covalently bound #=GF CC FMN. #=GF SQ 1 #=GS Q5L808_BACFN/5-159 AC Q5L808.1 #=GS Q5L808_BACFN/5-159 DR PDB; 3KLB A; 5-159; Q5L808_BACFN/5-159 KILVAYFSCSGVTKAVAEKLAAITGADLYEIKPEVPYTEADLDWNDKKSRSSVEMRDALSRPAISGTLFHPEKYEVLFVGFPVWWYIAPTIINTFLESYDFAGKIVVPFATSGGSGIGNCEKNLHKAYPDIVWKDGKLLNGQITRDLVTEWFEKI #=GR Q5L808_BACFN/5-159 SS -EEEEE--SSSHHHHHHHHHHHHHT-EEEE--BSS---TGGG-TT-TTSHHHHHHT-TT----BS---S-GGG-SEEEEEEE-BTTB--HHHHHHHHTS--TT-EEEEEEE-SS--SHHHHHHHHHH-TTSEE---EE--S---HHHHHHHHHHT #=GC SS_cons -EEEEE--SSSHHHHHHHHHHHHHT-EEEE--BSS---TGGG-TT-TTSHHHHHHT-TT----BS---S-GGG-SEEEEEEE-BTTB--HHHHHHHHTS--TT-EEEEEEE-SS--SHHHHHHHHHH-TTSEE---EE--S---HHHHHHHHHHT #=GC seq_cons KILVAYFSCSGVTKAVAEKLAAITGADLYEIKPEVPYTEADLDWNDKKSRSSVEMRDALSRPAISGTLFHPEKYEVLFVGFPVWWYIAPTIINTFLESYDFAGKIVVPFATSGGSGIGNCEKNLHKAYPDIVWKDGKLLNGQITRDLVTEWFEKI //