# STOCKHOLM 1.0 #=GF ID DUF6547 #=GF AC PF20184.1 #=GF DE Family of unknown function (DUF6547) #=GF AU Paysan-Lafosse T;0000-0001-5663-0894 #=GF AU Chuguransky S;0000-0002-0520-0736 #=GF SE MGnify-UniProt clustering #=GF GA 27.00 27.00; #=GF TC 27.20 28.70; #=GF NC 25.40 25.30; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 61295632 -E 1000 --cpu 4 HMM pfamseq #=GF TP Family #=GF WK Domain_of_unknown_function #=GF DR SO; 0100021; polypeptide_conserved_region; #=GF CC This family of proteins is functionally uncharacterised. This #=GF CC family of proteins is found in bacteria. Proteins in this family #=GF CC are typically between 116 and 127 amino acids in length. #=GF SQ 29 #=GS A0A1Y4T9B9_9FIRM/1-116 AC A0A1Y4T9B9.1 #=GS A0A2G3E646_9FIRM/1-116 AC A0A2G3E646.1 #=GS A0A1I0Y188_9BACL/1-60 AC A0A1I0Y188.1 #=GS E0I4G4_9BACL/6-122 AC E0I4G4.1 #=GS A0A4Q9KKC6_9ACTN/1-93 AC A0A4Q9KKC6.1 #=GS A0A4Q9KDX2_9ACTN/3-116 AC A0A4Q9KDX2.1 #=GS A0A5C6CRH8_9BACT/7-125 AC A0A5C6CRH8.1 #=GS A0A5C4T4Z9_9BACL/2-59 AC A0A5C4T4Z9.1 #=GS G9YTY5_FLAPL/1-116 AC G9YTY5.1 #=GS A0A4Q8UHH3_9ALTE/1-116 AC A0A4Q8UHH3.1 #=GS D4MQW8_9FIRM/1-116 AC D4MQW8.1 #=GS A0A4Q2EDM3_9ACTN/3-118 AC A0A4Q2EDM3.1 #=GS E9SCW2_RUMAL/1-116 AC E9SCW2.1 #=GS A0A6G7Y6X1_9ACTN/3-118 AC A0A6G7Y6X1.1 #=GS A0A1Y4B9Y4_9FIRM/1-116 AC A0A1Y4B9Y4.1 #=GS Q7UY09_RHOBA/6-125 AC Q7UY09.1 #=GS A0A3N0DZR8_9ACTN/1-67 AC A0A3N0DZR8.1 #=GS A6NUL7_9FIRM/1-116 AC A6NUL7.1 #=GS A0A3N2QDL8_9ALTE/1-117 AC A0A3N2QDL8.1 #=GS A0A402A3K3_9CHLR/34-139 AC A0A402A3K3.1 #=GS A0A1Y4IEK0_9FIRM/1-116 AC A0A1Y4IEK0.1 #=GS R6PYZ8_9FIRM/1-116 AC R6PYZ8.1 #=GS A0A1A7NY61_9PAST/1-116 AC A0A1A7NY61.1 #=GS U2R6Y0_9FIRM/1-116 AC U2R6Y0.1 #=GS A0A2V1K0N2_9BURK/3-122 AC A0A2V1K0N2.1 #=GS A0A1Y4TPI4_9FIRM/1-116 AC A0A1Y4TPI4.1 #=GS A0A3P1STT7_9GAMM/1-112 AC A0A3P1STT7.1 #=GS A0A3G9J3P4_9BACL/6-122 AC A0A3G9J3P4.1 #=GS C6D4B5_PAESJ/12-128 AC C6D4B5.1 A0A1Y4T9B9_9FIRM/1-116 ................MSKELELYKAFIDGLVD..........RKNSITARWVKGD....GF.PR........TEDNK.....AKNEFLAALTPEQKGVLAEMLQDEHVAGIHDTLAYINEMMDLDGLELRQDE.VSLPNDYFES-LHYDFISRCDGDEWPE..... A0A2G3E646_9FIRM/1-116 ................MENGLEMYKAFIDGLVE..........RKDSVRGKWILGN....GY.PN........TDENR.....DINEFLSMLSNEQKRIIVQMVIEARESGIHDTLQYMNEMMDCRDLVLSQKG.EPYPYDHFDS-MYYDFIARCAGDEWPE..... A0A1I0Y188_9BACL/1-60 ................-----------------..........-------------....--.--........-----.....------------------MIVQEARDSGIHDVLASLTDQINVEGLEIVKNG.VTLASEPFDTPMHYDWVCRKEGDPWPD..... E0I4G4_9BACL/6-122 ...............e-QASLDVYKSFIDDLVD..........IRPGVLTLWAESK....GW.PK........TEENA.....KFNSFLSELTQEQRAILAMMIQQSRDGGIHDVLAYLSEETNLNGLKIMKND.VEMSVEPFGTQLYFDWVCRREGDDWPD..... A0A4Q9KKC6_9ACTN/1-93 ...........mtddr-----FLYRTVIDALVVqc......rdGQGQVSAHRVRAG....VW.NEnaeavddaSPDQH.....EMNVLLAGLTEEQRHALAVLFAEEFSSGVYNALQVLE--------------.---------------------------farvv A0A4Q9KDX2_9ACTN/3-116 ..........ehdprw------MYRQMIDAMVVccsg.pgqvsAERIRIGVWN-EN....AA.AD........DVRQT.....ALNRLVTSLDADQREALAVVMAEEFASGIFNALEVLQA------AQLTPFE.VGYEGDPSD-----DFLGRLDGWEWP-v.... A0A5C6CRH8_9BACT/7-125 ..............sa--TVVDVYKRIIDTLVQe........tRLLASSSDLVESG....RY.SN........APAHQ.....RFNDFIQSLSFLQRQTLAELLQEERDGAIHDVLAVLSWWVDCHDVGFTYRG.EDMPVDLSGMGMHGDYVGRRDGREWPS..... A0A5C4T4Z9_9BACL/2-59 qtqyinemlnipelki-----------------..........-------------....--.--........-----.....------------------------------------HQILSTDGFEITKNG.VKMATEPFGSEMYFDWVCRREGDEWPD..... G9YTY5_FLAPL/1-116 ................MSKELKLYKAFIDGLVE..........RKDSMTARWIKGD....GF.PQ........TDDNK.....AKNDLFAALTPAQREVLAEILQDEHIAGIHDALAYINEMIDLEGLELHQDG.ESYPNDYFES-LHYDFISRCDGDEWPE..... A0A4Q8UHH3_9ALTE/1-116 ..............md---SLEEYKSFIDDAVA..........TSRSMQSNWCLQG....KY.PD........TAENS.....EINELLSTLNKKQLLVLSAMLERAKESGVHDLLALIHEKQILGNLEIYTSK.SKLPVEPFGTEMHYDFISRKFGDDWPE..... D4MQW8_9FIRM/1-116 ................MSKELVLYKAFIDGLVE..........RKDSMTALCVKGG....GF.PK........TEDNK.....AKNDLLATLTPEQKDVLAEMLQDEHIAGIHTTLAYINKMMDLDGLELHQDG.ESYPNDYFES-LHYDFISRCDGDEWPE..... A0A4Q2EDM3_9ACTN/3-118 ..........ehdsrw------LYRQMIDAMVVaclqgpgqvsAERIRIGVWNPNA....DV.DT........DPDQV.....AMNGLLSSLEESHRQALSALFAEEFASGIFNALTVLTA------AHLEPFH.EGYEGDPSD-----DFLGRIDGSPWP-g.... E9SCW2_RUMAL/1-116 ................MDKAAELYKTLIDELVK.........iSEHSVGADNVRKG....RV.P-........AADSE.....KINRVLAKLSSADREVLAAFVAEEYVSGIFDVLDLLEWYTCCRDMKISVDG.EILPTGKFEG-MQNDFIGRRGGWKFPD..... A0A6G7Y6X1_9ACTN/3-118 ...........ehdsr-----WMYRQTIDAMVVac......lqGQGQVSAERIRVG....VWnPN........ADDETdpnqvTMNALLRSMEERHRQALAVLFAEEFASGIFNALTVLAA------ARIEPFT.QGYEGEPS-----DDFLGRIDGSEWP-t.... A0A1Y4B9Y4_9FIRM/1-116 ................MSKELELYKAFIDGLVE..........RKDSMTALWVKGD....GF.PK........TEDNK.....AKNELLAALTPEQKGVLAEMLQDEHIAGIHDTLAYINEMMDLEGLELHQDG.ESYSNDYFES-LHYDFISRCDGDEWPE..... Q7UY09_RHOBA/6-125 ...............p-STPREAYQRIIDQLVDrtp....gvtAKRIIAGDSLAD-....--.AD........PDTAA.....AFTEFAASLSQSQREVLAQLCIAQRHGAIHDTLAALSWWIDCGGVSLRYND.SDMPVDISGMGLHGDYVGRGQGWDWPD..... A0A3N0DZR8_9ACTN/1-67 ...............m-----------------..........-------------....--.--........-----.....--NLLLARLSSEDRDVVARMLELSYQGAVHDTLAVLHE----REVQPFDDGyEGTPYHDFMGRLMTDW-----------dwpv. A6NUL7_9FIRM/1-116 ................MSKELELYKAFIDGLVE..........RKDSVTALWVKGD....GF.PK........TEDNK.....AKNELLATLTPEQKGVLAEMLQDEHIAGIYTTLAYINKMMDLEGLELHQDG.ESYPNDHFES-LHYDFISRCDGDEWPE..... A0A3N2QDL8_9ALTE/1-117 ................MSREVEEYKSFVDSLVG..........IKDSAAADWARAG....RF.PE........VPENE.....SVNQLLASLTDAQRAVLGSVIQSAKESGVHDALVYLNEKMVSGEIQITQSG.AELPVEPFGTELYFDWIARCEGDEWPE..... A0A402A3K3_9CHLR/34-139 ..............lk--SPLQEYKTFIDELVVlvn....tlsR----TAGQIKRGatiyRG.QT........TAEQD.....RQDKAMASLSAVQREVIFDFLMNEPVDVVGQVLSHFSW----KDYRISRGD.APLAVQPFCANL---------------sg... A0A1Y4IEK0_9FIRM/1-116 ................MSKELELYKAFIDGLVE..........RKDSMTALWVKGD....GF.PK........TEDNK.....AKNELLAALTPEQKGVLAEMLQDEHIAGIHDTLAYINEMMDLEGLELHQDG.ESYPNDYFES-LHYDFISRCDGDEWPE..... R6PYZ8_9FIRM/1-116 ................MGKELELYKAFIDGLVE..........QKDSVTAKWVLEG....GF.PH........TEDNQ.....AKNEFLSSLTLAQKSVLAEMLQEEHIAGIHDTLAYINEMMDLDGLELHQDG.ESYPNDAFES-LHYDFISRCEGERWPE..... A0A1A7NY61_9PAST/1-116 ................MDNLLESYKDFIDGLVE..........KRRTVKAKWVVGT....GY.PH........TETNK.....EINNLLEQLTAEQKEILANMLSEAKEEGIHDTLAYMNELFDTEGYGLTKDG.ESLPYDAFES-MHYDFVCRCEGDEWPE..... U2R6Y0_9FIRM/1-116 ................MSKELELYQAFIDGLVE..........RKDSITARWVKGD....GF.PK........TEDNK.....AKNELLATLTPEQKGVLAEMLQDEHIAGIHDTLAYINEMMDLDGLELRQDG.ESIPNDYFES-LHYDFISRCDGDEWPE..... A0A2V1K0N2_9BURK/3-122 ..............gt--APIPVYQAMIDELVDe.......trLHSPLAKRVATDD....SL.PA........AREDS.....AIHKLVPSLTQEQRIWLSELLMQERSSAIHDTLSVLSWWIECRDVALTVNG.NALPADLSGMGMQGDYIGRVDGWTWPD..... A0A1Y4TPI4_9FIRM/1-116 ................MSKELVLYKAFIDGLVE..........RKDSMTALCVKGG....GF.PK........TEDNK.....AKNDLLATLTPEQKDVLAEMLQDEHIAGIHTTLAFINKMMDLDGLELHQDG.ESYPNDYFES-LHYDFISRCDGDEWPE..... A0A3P1STT7_9GAMM/1-112 ................MSTKLESYKSFIDDVVG..........IKKSAISTWVEKG....SF.PE........VPDNI.....KRNEILSTLSNEQRTELAKIIQESNESGIHDLLVLLND-----NASIEYKG.VKLPKEPFDTQLNFDFVARSEGDSWPK..... A0A3G9J3P4_9BACL/6-122 ...............q-AESLQNYKDFIDGLVD..........IRLSVLSNWVLTK....GW.PK........TEENS.....KINEFINGLSQDQKQILAHIIQQSRDGGIHDVLVFLTDEININGLKLIKNE.TEMAKEPFDSEMYYDWDCRREGDPWPD..... C6D4B5_PAESJ/12-128 ...............e-KQAIERYKEFIDDLVE..........LRPSVYPRWIMEN....GW.PV........KVENE.....RINRVLSGLTTEQKEVIAMIAQSARDGGIHDVLVYLTDQINLEGLEMVKNG.VKLATEPFDSGMHYDWVCRREGDSWPD..... #=GC seq_cons .................tp.lphYKsFIDsLVp..........t+puhtuthltss....sa.Pp........st-sp.....thNclLusLo.cQ+plLAphlp-p+.uGIHDsLuhlschhshcslclppsG.pshPs-.F-o.haaDaluRp-GD-WP-..... //