!!

Powering down the Pfam website
On October 5th, we began redirecting traffic from Pfam (pfam.xfam.org) to InterPro (www.ebi.ac.uk/interpro). The Pfam website will remain available at pfam-legacy.xfam.org until January 2023, when it will be decommissioned. You can read more about the sunset period in our blog post.

Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.

Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
C-C_Bond_Lyase PF15617 Family 67 849 319.8 45 87.82 Changed C-C_Bond_Lyase of the TIM-Barrel fold
C-JID PF20160 Domain 56 4078 138.2 17 15.89 Changed C-JID domain
c-SKI_SMAD_bind PF08782 Domain 28 1731 92.2 48 13.46 Changed c-SKI Smad4 binding domain
C1-set PF07654 Domain 69 25851 82.3 23 31.98 Changed Immunoglobulin C1-set domain
C12orf66_like PF09404 Family 5 703 330.3 33 78.9 Changed KICSTOR complex C12orf66 like
C166 PF17615 Family 2 220 140.4 31 63.37 Changed Family of unknown function
C1ORF64 PF15547 Family 11 89 133.5 65 76.84 Changed Steroid receptor-associated and regulated protein
C1q PF00386 Domain 32 13815 123.3 28 32.14 Changed C1q domain
C1_1 PF00130 Domain 44 47816 52.6 31 7.25 Changed Phorbol esters/diacylglycerol binding domain (C1 domain)
C1_2 PF03107 Domain 217 15035 48.6 30 30.83 Changed C1 domain
C1_4 PF07975 Domain 10 1352 54.8 41 12.44 Changed TFIIH C1-like domain
C2 PF00168 Domain 258 183893 106.4 19 19.67 Changed C2 domain
C2-C2_1 PF11618 Domain 40 893 140.6 39 12.4 Changed First C2 domain of RPGR-interacting protein 1
C2-set PF05790 Domain 27 809 82.9 29 24.83 Changed Immunoglobulin C2-set domain
C2-set_2 PF08205 Domain 26 19923 86.6 18 17.88 Changed CD80-like C2-set immunoglobulin domain
C2orf69 PF10561 Family 17 937 180.8 24 68.47 Changed C2orf69
C4 PF01413 Domain 110 5206 106.3 48 15.26 Changed C-terminal tandem repeated domain in type 4 procollagen
C4bp_oligo PF18453 Domain 13 243 47.9 62 10.11 Changed Oligomerization domain of C4b-binding protein alpha
C5-epim_C PF06662 Repeat 14 800 182 42 33.84 Changed D-glucuronyl C5-epimerase C-terminus
C5HCH PF17982 Domain 14 1653 49.3 57 3.2 Changed NSD Cys-His rich domain
C6 PF01681 Family 98 385 92.3 20 43.84 Changed C6 domain
C6_DPF PF10170 Domain 29 443 90.4 47 52.92 Changed Cysteine-rich domain
C8 PF08742 Domain 686 17008 67.7 32 10.24 Changed C8 domain
C9orf72-like PF15019 Family 18 549 223.9 51 49.2 Changed C9orf72-like protein family
Caa3_CtaG PF09678 Family 231 4257 230.9 25 59.6 Changed Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)
CAAD PF14159 Domain 105 1535 82 39 35.77 Changed CAAD domains of cyanobacterial aminoacyl-tRNA synthetase
CAAP1 PF15335 Family 25 427 61.4 52 15.19 Changed Caspase activity and apoptosis inhibitor 1
CaATP_NAI PF12515 Family 27 1851 44.3 53 4.74 Changed Ca2+-ATPase N terminal autoinhibitory domain
CAAX_1 PF15895 Family 1 32 139.9 47 78.8 Changed CAAX box cerebral protein 1
CABIT PF12736 Domain 41 2241 238.9 23 47.64 Changed Cell-cycle sustaining, positive selection,
CABS1 PF15367 Family 8 74 383.4 67 80.35 Changed Calcium-binding and spermatid-specific protein 1
CAC1F_C PF16885 Family 6 4899 186.9 22 16.31 Changed Voltage-gated calcium channel subunit alpha, C-term
Cache_3-Cache_2 PF17201 Domain 28 1001 229.6 20 35.82 Changed Cache 3/Cache 2 fusion domain
CactinC_cactus PF09732 Domain 43 1666 124.9 66 20.16 Changed Cactus-binding C-terminus of cactin protein
Cactin_mid PF10312 Family 104 1674 182.6 37 29.62 Changed Conserved mid region of cactin
Cad PF03596 Family 4 1012 184.2 33 87.76 Changed Cadmium resistance transporter
CadC_C1 PF18500 Domain 5 37 130.7 71 28.11 Changed CadC C-terminal domain 1
Cadherin PF00028 Domain 55 278836 93.1 25 45.26 Changed Cadherin domain
Cadherin-like PF12733 Domain 42 3115 92.4 27 15.45 Changed Cadherin-like beta sandwich domain
Cadherin_2 PF08266 Domain 45 15335 82.5 35 9.46 Changed Cadherin-like
Cadherin_3 PF16184 Domain 85 28446 112.4 22 44.68 Changed Cadherin-like
Cadherin_4 PF17803 Domain 694 3877 78.8 27 7.59 Changed Bacterial cadherin-like domain
Cadherin_5 PF17892 Domain 75 2313 95.1 29 9.31 Changed Cadherin-like domain
Cadherin_C_2 PF16492 Family 115 8597 88.3 29 10.6 Changed Cadherin cytoplasmic C-terminal
Cadherin_pro PF08758 Domain 12 2621 81.9 27 9.97 Changed Cadherin prodomain like
Cadherin_tail PF15974 Family 4 2630 129.6 45 13.94 Changed Cadherin C-terminal cytoplasmic tail, catenin-binding region
CADH_Y-type_LIR PF01049 Family 93 9087 59.1 54 6.54 Changed Cadherin, Y-type LIR-motif
Caenor_Her-1 PF09232 Domain 6 56 114.5 27 62.28 Changed Caenorhabditis elegans Her-1
Caerin_1 PF07440 Family 2 0 0 0 0 Changed Caerin 1 protein
CAF-1_p150 PF11600 Disordered 4 402 141.2 61 17.57 Changed Chromatin assembly factor 1 complex p150 subunit, N-terminal
CAF-1_p60_C PF15512 Domain 18 383 135.5 38 26.88 Changed Chromatin assembly factor complex 1 subunit p60, C-terminal
CAF1 PF04857 Family 139 8490 192.2 18 60.77 Changed CAF1 family ribonuclease
CAF1-p150_C2 PF15539 Domain 5 381 259.1 49 30.19 Changed CAF1 complex subunit p150, region binding to CAF1-p60 at C-term
CAF1-p150_N PF15557 Domain 8 300 199.4 35 22.36 Changed CAF1 complex subunit p150, region binding to PCNA
CAF1A PF12253 Family 132 1724 76.2 41 9.91 Changed Chromatin assembly factor 1 subunit A
CAF1C_H4-bd PF12265 Family 228 5265 69.5 36 15.64 Changed Histone-binding protein RBBP4 or subunit C of CAF1 complex
CAF20 PF17052 Family 24 75 149.8 40 93.37 Changed Cap associated factor
Caf4 PF11615 Family 1 4 63.5 41 9.64 Changed CCR4-associated factor 4
Cag12 PF13117 Family 4 26 87.8 34 56.62 Changed Cag pathogenicity island protein Cag12
CagA PF03507 Motif 2 2 36 70 6.07 Changed CagA exotoxin phosphopeptide substrate mimic region
CagA_N PF18971 Family 1 1 876 100 73.86 Changed CagA protein
CagD PF16567 Domain 1 1 205 100 99.03 Changed Pathogenicity island component CagD
CAGE1 PF15066 Family 12 320 327.1 44 58.35 Changed Cancer-associated gene protein 1 family
CagE_TrbE_VirB PF03135 Family 11 2125 196 25 24.92 Changed CagE, TrbE, VirB family, component of type IV transporter system
CagS PF16707 Family 1 1 196 100 100 Changed Cag pathogenicity island protein S of Helicobacter pylori
CagX PF03524 Family 115 2251 211.6 29 70.65 Changed Conjugal transfer protein
CagY_I PF14585 Repeat 2 3 65 89 10.12 Changed CagY type 1 repeat
CagY_M PF07337 Repeat 8 32 30.5 47 36.83 Changed DC-EC Repeat
CagZ PF09053 Domain 1 1 199 100 100 Changed CagZ
CaiF_GrlA PF07180 Family 2 39 104.7 33 75.7 Changed CaiF/GrlA transcriptional regulator
CaKB PF03185 Family 30 1312 173.2 37 76.63 Changed Calcium-activated potassium channel, beta subunit
Calcipressin PF04847 Family 6 2227 176.1 39 73.33 Changed Calcipressin
Calci_bind_CcbP PF11535 Family 21 212 97.6 28 72.69 Changed Calcium binding
CALCOCO1 PF07888 Coiled-coil 10 1136 303.5 35 48.47 Changed Calcium binding and coiled-coil domain (CALCOCO1) like
Calcyon PF06387 Family 10 940 148.6 53 87.49 Changed D1 dopamine receptor-interacting protein (calcyon)
Calc_CGRP_IAPP PF00214 Family 50 1615 118.1 26 80.87 Changed Calcitonin / CGRP / IAPP family
Caldesmon PF02029 Disordered 11 1661 318.5 34 78.43 Changed Caldesmon
Caleosin PF05042 Family 101 1947 151 43 65.74 Changed Caleosin related protein
Calici_coat PF00915 Family 4 43 234.4 17 17.73 Changed Calicivirus coat protein
Calici_coat_C PF08435 Family 29 1 224 100 42.26 Changed Calicivirus coat protein C-terminal
Calici_MSP PF05752 Family 1 1 165 100 100 Changed Calicivirus minor structural protein
Calici_PP_N PF08405 Family 1 1 358 100 20.01 Changed Viral polyprotein N-terminal
Calmodulin_bind PF07887 Domain 60 2812 141.9 44 26.81 Changed Calmodulin binding protein-like N-terminal domain
Calmod_bind_C PF20452 Domain 60 2420 61.1 31 11.07 New Calmodulin binding protein C-terminal domain
Calmod_bind_M PF20451 Domain 60 2729 65.5 49 12.03 New Calmodulin binding protein central domain
Calpain_III PF01067 Domain 132 9530 129.2 35 18.6 Changed Calpain large subunit, domain III
Calpain_inhib PF00748 Family 44 4459 146.1 30 71.6 Changed Calpain inhibitor
Calpain_u2 PF16648 Disordered 7 452 66.5 54 8.59 Changed Unstructured region on Calpain-3
Calponin PF00402 Repeat 39 6563 24.4 61 19.22 Changed Calponin family repeat
Calreticulin PF00262 Family 102 6983 218 35 64.29 Changed Calreticulin family
Calsarcin PF05556 Family 29 1150 244.2 35 83.95 Changed Calcineurin-binding protein (Calsarcin)
Calsequestrin PF01216 Family 2 1392 332.6 58 91.14 Changed Calsequestrin
Calx-beta PF03160 Domain 32 31376 97.6 23 21.59 Changed Calx-beta domain
Calycin_like PF13944 Domain 40 188 124.2 18 39.67 Changed Calycin-like beta-barrel domain
CaM-KIIN PF15170 Family 7 440 74.9 64 80.97 Changed Calcium/calmodulin-dependent protein kinase II inhibitor
CaMBD PF02888 Family 21 2196 72.9 66 12.15 Changed Calmodulin binding domain
CaMKII_AD PF08332 Domain 5 6496 123.6 71 25.86 Changed Calcium/calmodulin dependent protein kinase II association domain
Campylo_MOMP PF05538 Family 3 69 389.4 24 94.42 Changed Campylobacter major outer membrane protein
CAMP_factor PF07373 Family 3 62 188.7 30 68.6 Changed CAMP factor (Cfa)
CamS PF07537 Family 41 591 306.7 33 83.05 Changed CamS sex pheromone cAM373 precursor
CAMSAP_CC1 PF17095 Family 29 2456 59 49 4.01 Changed Spectrin-binding region of Ca2+-Calmodulin
CAMSAP_CH PF11971 Domain 17 4062 83 39 6.85 Changed CAMSAP CH domain
CAMSAP_CKK PF08683 Domain 17 2673 115.7 60 8.31 Changed Microtubule-binding calmodulin-regulated spectrin-associated
CaM_bdg_C0 PF10562 Domain 8 1178 29 84 3.19 Changed Calmodulin-binding domain C0 of NMDA receptor NR1 subunit
CaM_bind PF16025 Family 29 608 82.1 36 8.96 Changed Calcium-dependent calmodulin binding
CaM_binding PF07839 Domain 51 1468 108.8 30 19.8 Changed Plant calmodulin-binding domain
Candida_ALS PF05792 Repeat 445 4721 32 38 31.97 Changed Candida agglutinin-like (ALS)
Candida_ALS_N PF11766 Domain 79 202 245.9 30 24.35 Changed Cell-wall agglutinin N-terminal ligand-sugar binding
CANIN PF14816 Domain 14 635 316.2 40 36.18 Changed Coiled-coil and Nse Interacting (CANIN) domain
CAP PF00188 Domain 94 28061 122.5 18 45.18 Changed Cysteine-rich secretory protein family
CAP-ZIP_m PF15255 Family 10 1236 132.9 37 14.07 Changed WASH complex subunit CAP-Z interacting, central region
CAP160 PF07918 Repeat 9 309 26.7 69 7.66 Changed CAP160 repeat
CAP18_C PF12153 Domain 9 75 27.4 48 15.43 Changed LPS binding domain of CAP18 (C terminal)
Cap4_nuclease PF14130 Family 17 239 191.9 16 43.36 Changed Cap4 dsDNA endonuclease
CAP59_mtransfer PF11735 Family 184 1970 242.8 31 49.24 Changed Cryptococcal mannosyltransferase 1
Caprin-1_C PF12287 Family 28 1675 237.4 47 36.74 Changed Cytoplasmic activation/proliferation-associated protein-1 C term
Caprin-1_dimer PF18293 Domain 19 1564 114.4 51 14.84 Changed Caprin-1 dimerization domain
Capsid-VNN PF11729 Family 1 24 251.8 21 63 Changed nodavirus capsid protein
Capsid_N PF16903 Domain 8 328 189.3 21 40.95 Changed Major capsid protein N-terminus
Capsid_NCLDV PF04451 Domain 17 291 191.4 25 39.32 Changed Large eukaryotic DNA virus major capsid protein
Capsid_pestivir PF11889 Domain 1 1 56 100 1.4 Changed Capsid protein C, pestivirus
Capsid_VP7 PF17071 Family 2 2 274.5 30 100 Changed Outer capsid protein VP7
Capsule_synth PF05159 Family 7 3689 198.7 18 60.88 Changed Capsule polysaccharide biosynthesis protein
Caps_assemb_Wzi PF14052 Family 30 1022 386.6 15 76.55 Changed Capsule assembly protein Wzi
Caps_synth PF05704 Family 28 955 201.5 20 49.31 Changed Capsular polysaccharide synthesis protein
Caps_synth_CapC PF14102 Family 56 490 120.4 30 54.71 Changed Capsule biosynthesis CapC
Caps_syn_GfcC_C PF06251 Domain 6 247 86.8 26 19.75 Changed Capsule biosynthesis GfcC C-terminal
Caps_syn_GfcC_N PF20616 Domain 6 169 123 24 41.63 New Capsule biosynthesis GfcC, N-terminal
CAP_assoc_N PF14504 Domain 47 690 136.4 25 36.37 Changed CAP-associated N-terminal
CAP_C PF08603 Family 139 2569 151.2 43 32.03 Changed Adenylate cyclase associated (CAP) C terminal
CAP_GLY PF01302 Domain 593 17056 66.7 40 8.66 Changed CAP-Gly domain
CAP_N PF01213 Family 156 1680 71 34 14.54 Changed Adenylate cyclase associated (CAP) N terminal
CarA_N PF09147 Domain 1 12 160.7 29 58.76 Changed Carbapenam-3-carboxylate synthase, N-terminal
Carbam_trans_C PF16861 Domain 182 2256 170.9 44 29.35 Changed Carbamoyltransferase C-terminus
Carbam_trans_N PF02543 Domain 4 2730 255.2 27 53.48 Changed Carbamoyltransferase N-terminus
CarbopepD_reg_2 PF13715 Domain 86 47567 84.1 29 9.17 Changed CarboxypepD_reg-like domain
Carboxyl_trans PF01039 Family 27 29381 401.8 26 60.84 Changed Carboxyl transferase domain
CarboxypepD_reg PF13620 Domain 355 24273 80.7 23 11.62 Changed Carboxypeptidase regulatory-like domain
CarbpepA_inh PF02977 Domain 7 79 43.7 29 43.13 Changed Carboxypeptidase A inhibitor
Carbpep_Y_N PF05388 Family 14 459 104.6 31 19.08 Changed Carboxypeptidase Y pro-peptide
Carb_anhydrase PF00194 Domain 302 14309 215.1 27 55.27 Changed Eukaryotic-type carbonic anhydrase
Carb_bind PF10645 Domain 29 201 47.6 42 11.45 Changed Carbohydrate binding
Carb_kinase PF01256 Family 9 9967 241.3 28 56.31 Changed Carbohydrate kinase
Carcinustatin PF08261 Family 2 9 7.8 73 9.26 Changed Carcinustatin peptide
CARD PF00619 Domain 47 11008 83.9 20 13.19 Changed Caspase recruitment domain
CARDB PF07705 Domain 42 3929 106.2 20 13.18 Changed CARDB
CARD_2 PF16739 Domain 45 1805 90.5 24 17.77 Changed Caspase recruitment domain
CarD_CdnL_TRCF PF02559 Family 759 12067 101.2 29 12.47 Changed CarD-like/TRCF domain
Carla_C4 PF01623 Family 10 34 87.7 34 78.24 Changed Carlavirus putative nucleic acid binding protein
CARM1 PF11531 Domain 6 794 98.2 52 18.31 Changed Coactivator-associated arginine methyltransferase 1 N terminal
CARME PF07942 Family 12 2413 246.5 37 60.68 Changed Carnosine N-methyltransferase
CARMIL_C PF16000 Family 28 1925 250.6 30 21.38 Changed CARMIL C-terminus
Carmo_coat_C PF08462 Family 8 5 98.8 35 28.52 Changed Carmovirus coat protein
Carm_PH PF17888 Domain 14 1524 89 38 6.92 Changed Carmil pleckstrin homology domain
Carn_acyltransf PF00755 Family 388 10079 482.8 29 76.74 Changed Choline/Carnitine o-acyltransferase
Caroten_synth PF04240 Family 59 1141 203.3 24 75.89 Changed Carotenoid biosynthesis protein
Carot_N PF09150 Domain 49 357 145.6 40 67.1 Changed Orange carotenoid protein, N-terminal
CarS-like PF01864 Family 3 434 154.1 30 89.82 Changed CDP-archaeol synthase
CART PF06373 Family 12 653 67.9 58 54.3 Changed Cocaine and amphetamine regulated transcript protein (CART)
Cas1_AcylT PF07779 Family 18 2126 377.5 34 63.63 Changed 10 TM Acyl Transferase domain found in Cas1p
Cas3_C PF18395 Domain 107 481 112.1 26 12.22 Changed Cas3 C-terminal domain
Cas5fv_helical PF20158 Domain 17 26 142.1 38 47.94 Changed Cas5fv helical domain
Cas6 PF09559 Family 31 146 197.1 33 89.91 Changed Cas6 Crispr
Cas6b_C PF17262 Domain 37 124 113.1 33 50.37 Changed Cas6b C-terminal domain
Cas6b_N PF17955 Domain 21 126 102.5 27 45.96 Changed Cas6b N-terminal domain
Cas6_N PF17952 Domain 12 37 111.7 24 41.92 Changed Cas6 N-terminal domain
Cas9-BH PF16593 Family 23 240 33.9 42 2.53 Changed Bridge helix of CRISPR-associated endonuclease Cas9
Cas9_a PF18470 Domain 28 271 176 18 16.69 Changed Cas9 alpha-helical lobe domain
Cas9_b_hairpin PF17893 Domain 10 35 91.1 46 8.3 Changed CRISPR-associated endonuclease Cas9 beta-hairpin domain
Cas9_C PF18525 Domain 15 36 114 34 10.38 Changed Cas9 C-terminal domain
Cas9_PI PF16595 Domain 23 186 260.2 21 20.14 Changed PAM-interacting domain of CRISPR-associated endonuclease Cas9
Cas9_PI2 PF18070 Domain 9 56 60.2 37 6.17 Changed CRISPR-Cas9 PI domain
Cas9_REC PF16592 Family 7 218 499.1 28 40.59 Changed REC lobe of CRISPR-associated endonuclease Cas9
Cas9_Topo PF17894 Domain 14 37 72.5 49 6.77 Changed Topo homolgy domain in CRISPR-associated endonuclease Cas9
Casc1_C PF12366 Domain 9 429 187.8 34 24.14 Changed Cancer susceptibility candidate 1 C-terminal
Casc1_N PF15927 Family 30 782 190.3 31 26.73 Changed Cancer susceptibility candidate 1 N-terminus
Casein PF00363 Family 15 166 83.6 29 36.85 Changed Casein
Casein_kappa PF00997 Family 15 103 155 56 83 Changed Kappa casein
Caskin-Pro-rich PF16907 Family 13 914 91.7 53 7.05 Changed Proline rich region of Caskin proteins
Caskin-tail PF16632 Disordered 14 878 59.2 63 4.56 Changed C-terminal region of Caskin
Caskin1-CID PF16600 Family 5 778 58.8 46 4.46 Changed Caskin1 CASK-interaction domain
CASP_C PF08172 Family 85 1683 225.2 34 34.9 Changed CASP C terminal
CASP_dom PF04535 Domain 84 7006 132.6 21 68.71 Changed Casparian strip membrane protein domain
Cass2 PF14526 Domain 28 2491 148 17 68.77 Changed Integron-associated effector binding protein
Cast PF10174 Coiled-coil 12 3518 491.7 47 66.24 Changed RIM-binding protein of the cytomatrix active zone
Castor1_N PF18700 Domain 11 691 56.2 68 17.82 Changed Cytosolic arginine sensor for mTORC1 subunit 1 N-terminal domain
Castor_Poll_mid PF06241 Family 9 1473 99.8 37 13.74 Changed Castor and Pollux, part of voltage-gated ion channel
Cas_APE2256 PF09651 Family 18 202 135 24 37.76 Changed CRISPR-associated protein (Cas_APE2256)
CAS_C PF12026 Domain 34 2005 195.2 40 25.26 Changed Crk-Associated Substrate C-terminal domain
Cas_Cas02710 PF09670 Family 8 249 265.6 16 73.89 Changed CRISPR-associated protein (Cas_Cas02710)
Cas_Cas1 PF01867 Family 339 4827 234 21 73.78 Changed CRISPR associated protein Cas1
Cas_Cas2CT1978 PF09707 Family 70 795 84.6 42 69.64 Changed CRISPR-associated protein (Cas_Cas2CT1978)
Cas_Cas4 PF01930 Family 38 2777 161.4 21 34.65 Changed Domain of unknown function DUF83
Cas_Cas5d PF09704 Family 42 2371 206.2 18 85.52 Changed CRISPR-associated protein (Cas_Cas5)
Cas_Cas6_C PF01881 Domain 115 906 127.2 20 52.1 Changed CRISPR associated protein Cas6, C-terminal
Cas_Cas7 PF05107 Family 114 1252 266.6 32 90.28 Changed CRISPR-associated protein Cas7
Cas_Cmr3 PF09700 Family 15 434 334.8 17 90.3 Changed CRISPR-associated protein (Cas_Cmr3)
Cas_Cmr5 PF09701 Family 48 310 119 22 85.1 Changed CRISPR-associated protein (Cas_Cmr5)
Cas_Csa4 PF09703 Family 6 9 356 20 93.66 Changed CRISPR-associated protein (Cas_Csa4)
Cas_Csa5 PF09702 Family 7 16 105.8 30 80.54 Changed CRISPR-associated protein (Cas_Csa5)
Cas_Csd1 PF09709 Family 110 876 556.8 24 96.23 Changed CRISPR-associated protein (Cas_Csd1)
CAS_CSE1 PF03378 Repeat 15 2030 390.5 34 44.38 Changed CAS/CSE protein, C-terminus
Cas_Csm6 PF09659 Family 6 103 310.2 19 83.77 Changed CRISPR-associated protein (Cas_Csm6)
Cas_Csn2 PF09711 Family 4 179 176.2 20 80.75 Changed CRISPR-associated protein (Cas_Csn2)
Cas_csx3 PF09620 Family 17 108 76.5 28 35.73 Changed CRISPR-associated protein (Cas_csx3)
Cas_Csx8 PF09657 Family 2 33 304.5 29 96.53 Changed CRISPR-associated protein Csx8 (Cas_Csx8)
Cas_Csx9 PF09658 Family 1 1 377 100 94.49 Changed CRISPR-associated protein (Cas_Csx9)
Cas_Csy1 PF09611 Family 31 248 351.4 30 83.52 Changed CRISPR-associated protein (Cas_Csy1)
Cas_Csy2 PF09614 Family 36 297 268.6 30 80.88 Changed CRISPR-associated protein (Cas_Csy2)
Cas_Csy3 PF09615 Family 34 297 324.4 46 96.68 Changed CRISPR-associated protein (Cas_Csy3)
Cas_Csy4 PF09618 Family 38 324 185.4 30 96.63 Changed CRISPR-associated protein (Cas_Csy4)
Cas_CT1975 PF09344 Family 52 962 351.2 32 95.36 Changed CT1975-like protein
Cas_CXXC_CXXC PF09706 Domain 4 118 64.3 29 11.86 Changed CRISPR-associated protein (Cas_CXXC_CXXC)
Cas_DxTHG PF09455 Family 62 368 369.2 15 84.9 Changed CRISPR-associated (Cas) DxTHG family
Cas_GSU0053 PF09617 Family 24 204 171.7 29 46.39 Changed CRISPR-associated protein GSU0053 (Cas_GSU0053)
Cas_GSU0054 PF09609 Family 2 120 331.1 19 74.44 Changed CRISPR-associated protein, GSU0054 family (Cas_GSU0054)
Cas_NE0113 PF09623 Family 10 218 199.7 27 53.71 Changed CRISPR-associated protein NE0113 (Cas_NE0113)
Cas_St_Csn2 PF16813 Domain 2 32 327.2 22 98 Changed CRISPR-associated protein Csn2 subfamily St
Cas_TM1802 PF09484 Family 26 258 466 14 85.01 Changed CRISPR-associated protein TM1802 (cas_TM1802)
Cas_VVA1548 PF09652 Domain 10 95 89.7 40 56.1 Changed Putative CRISPR-associated protein (Cas_VVA1548)
CAT PF00302 Domain 6 1149 193.7 27 93.61 Changed Chloramphenicol acetyltransferase
Catalase PF00199 Domain 341 12367 352.8 44 67.06 Changed Catalase
Catalase-rel PF06628 Family 557 10387 64.6 25 11.46 Changed Catalase-related immune-responsive
Catalase_C PF18011 Domain 28 2848 151.7 26 21.36 Changed C-terminal domain found in long catalases
CATASP PF20271 Family 22 63 85.3 27 50.71 New CATRA-Associated Small Protein
Cathelicidins PF00666 Domain 8 603 95.4 35 55.45 Changed Cathelicidin
CathepsinC_exc PF08773 Domain 30 675 116.3 41 26.75 Changed Cathepsin C exclusion domain
Cation_ATPase PF13246 Family 88 33826 106.4 24 9.51 Changed Cation transport ATPase (P-type)
Cation_ATPase_C PF00689 Family 134 32886 181.9 23 18.47 Changed Cation transporting ATPase, C-terminus
Cation_ATPase_N PF00690 Domain 122 36227 66.5 25 6.73 Changed Cation transporter/ATPase, N-terminus
Cation_efflux PF01545 Family 59 34767 203.5 20 55.16 Changed Cation efflux family
CATRA-C PF20270 Domain 31 65 113.2 29 23.51 New CASPASE and TPR Repeat-Associated C-terminal domain
CATRA-N PF20269 Domain 34 57 203 28 36.49 New CASPASE and TPR Repeat-Associated N-terminal domain
CATSPERB PF15149 Family 10 220 389.3 42 48.48 Changed Cation channel sperm-associated protein subunit beta protein family
CATSPERD PF15020 Family 8 491 372.4 25 60.95 Changed Cation channel sperm-associated protein subunit delta
CATSPERG PF15064 Family 3 517 497.1 40 79.87 Changed Cation channel sperm-associated protein subunit gamma
CAT_RBD PF03123 Domain 168 2198 56.2 35 20.22 Changed CAT RNA binding domain
Caudal_act PF04731 Family 24 742 134.2 41 51.53 Changed Caudal like protein activation region
Caudo_bapla16 PF16792 Domain 9 47 362.8 83 99.24 Changed Phage tail base-plate attachment protein of Caudovirales ORF16
Caudo_bapla_RBP PF08931 Domain 6 59 217.7 42 82.46 Changed Receptor-binding protein of phage tail base-plate Siphoviridae, head
Caudo_TAP PF02413 Family 29 538 120.9 25 72.65 Changed Caudovirales tail fibre assembly protein, lambda gpK
Caud_tail_N PF16838 Domain 2 49 113.9 31 17.4 Changed Caudoviral major tail protein N-terminus
Cauli_AT PF03233 Family 6 14 158.4 35 94.18 Changed Aphid transmission protein
Cauli_DNA-bind PF03310 Domain 12 15 110.8 31 55.72 Changed Caulimovirus DNA-binding protein
Cauli_VI PF01693 Family 255 5226 43.5 34 14.68 Changed Caulimovirus viroplasmin
Caveolin PF01146 Family 33 1463 130.4 42 73.06 Changed Caveolin
CAV_VP3 PF04771 Family 1 7 114.7 42 96.05 Changed Chicken anaemia virus VP-3 protein
Ca_bind_SSO6904 PF18249 Domain 6 14 88.9 42 98.57 Changed Calcium binding protein SSO6904
Ca_chan_IQ PF08763 Domain 28 6790 76 56 3.93 Changed Voltage gated calcium channel IQ domain
Ca_hom_mod PF14798 Family 68 1718 222.4 32 74.92 Changed Calcium homeostasis modulator
CA_like PF10563 Family 43 195 178 46 59.94 Changed Delta carbonic anhydrase
CBAH PF02275 Domain 8 3269 257.2 20 74.13 Changed Linear amide C-N hydrolases, choloylglycine hydrolase family
CbbQ_C PF08406 Family 111 1780 83.6 30 28.81 Changed CbbQ/NirQ/NorQ C-terminal
CBD_PlyG PF12123 Domain 7 42 45 43 17.13 Changed PlyG Cell wall binding domain
CbeA_antitoxin PF06154 Family 8 50 99.2 63 87.65 Changed CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A
CBF PF03914 Family 340 5222 170.5 27 22.5 Changed CBF/Mak21 family
CBFB_NFYA PF02045 Family 56 4061 55.5 67 18.72 Changed CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
CBFD_NFYB_HMF PF00808 Domain 25 13408 64.2 31 30.98 Changed Histone-like transcription factor (CBF/NF-Y) and archaeal histone
CBFNT PF08143 Domain 15 743 69 42 21.21 Changed CBFNT (NUC161) domain
CBF_beta PF02312 Family 18 826 132.7 60 76.41 Changed Core binding factor beta subunit
CbiA PF01656 Domain 79 20032 207.6 15 54.58 Changed CobQ/CobB/MinD/ParA nucleotide binding domain
CbiC PF02570 Family 376 3610 193.1 41 84.16 Changed Precorrin-8X methylmutase
CbiD PF01888 Family 297 2257 257.1 41 68.28 Changed CbiD
CbiG_C PF01890 Domain 419 2939 119.5 31 35.23 Changed Cobalamin synthesis G C-terminus
CbiG_mid PF11761 Domain 84 875 90.8 19 21.93 Changed Cobalamin biosynthesis central region
CbiG_N PF11760 Domain 304 2119 81.3 43 18.39 Changed Cobalamin synthesis G N-terminal
CbiJ PF02571 Family 301 3026 238.9 33 84.59 Changed Precorrin-6x reductase CbiJ/CobK
CbiK PF06180 Family 8 1042 252.5 34 83.04 Changed Cobalt chelatase (CbiK)
CbiM PF01891 Family 97 3367 204.3 26 81.39 Changed Cobalt uptake substrate-specific transmembrane region
CbiN PF02553 Family 92 838 69 45 64.01 Changed Cobalt transport protein component CbiN
CbiQ PF02361 Family 17 10439 211.3 19 76.25 Changed Cobalt transport protein
CbiX PF01903 Domain 62 8488 102.7 23 65.13 Changed CbiX
CbiZ PF01955 Family 129 1117 190.4 30 63.32 Changed Adenosylcobinamide amidohydrolase
CBL PF18973 Family 4 4 48.8 34 35.26 Changed Putative Chitin binding like
CblD PF07434 Family 21 27 281.2 32 70.72 Changed CblD like pilus biogenesis initiator
Cbl_N PF02262 Domain 29 1604 120.5 63 16.57 Changed CBL proto-oncogene N-terminal domain 1
Cbl_N2 PF02761 Domain 25 1642 82.5 71 11.11 Changed CBL proto-oncogene N-terminus, EF hand-like domain
Cbl_N3 PF02762 Domain 12 1614 84 81 11.28 Changed CBL proto-oncogene N-terminus, SH2-like domain
CBM-like PF14683 Domain 126 2939 175.3 30 28.77 Changed Polysaccharide lyase family 4, domain III
CBM26 PF16738 Domain 65 769 70.8 27 12.79 Changed Starch-binding module 26
CBM27 PF09212 Domain 2 69 175 21 16.84 Changed Carbohydrate binding module 27
CBM32 PF18344 Domain 18 49 62.7 32 8.47 Changed Carbohydrate binding module family 32
CBM39 PF15886 Domain 36 408 112.2 28 29.27 Changed Carbohydrate binding domain (family 32)
CBM46 PF18448 Domain 25 243 104.7 53 16.95 Changed Carbohydrate binding domain
CBM49 PF09478 Domain 23 801 82.2 32 16.06 Changed Carbohydrate binding domain CBM49
CBM53 PF16760 Family 150 1574 84.6 31 21.14 Changed Starch/carbohydrate-binding module (family 53)
CBM60 PF16841 Domain 39 583 92.4 23 16.93 Changed Ca-dependent carbohydrate-binding module xylan-binding
CBM64 PF18666 Domain 9 31 78.5 51 11.46 Changed Carbohydrate-binding module 64
CBM65_1 PF18259 Domain 25 63 112.9 24 27.68 Changed Carbohydrate binding module 65 domain 1
CBM77 PF18283 Domain 13 96 108.1 42 11.82 Changed Carbohydrate binding module 77
CBM9_1 PF06452 Domain 17 2679 180.4 17 24.03 Changed Carbohydrate family 9 binding domain-like
CBM9_2 PF16011 Family 8 451 190.7 29 82.07 Changed Carbohydrate-binding family 9
CBM_1 PF00734 Domain 715 7945 28.8 49 7.11 Changed Fungal cellulose binding domain
CBM_10 PF02013 Domain 92 2789 36.3 43 13.46 Changed Cellulose or protein binding domain
CBM_11 PF03425 Family 6 515 172 20 20.72 Changed Carbohydrate binding domain (family 11)
CBM_14 PF01607 Domain 150 22816 53.4 24 18.55 Changed Chitin binding Peritrophin-A domain
CBM_15 PF03426 Domain 2 12 148 25 34.64 Changed Carbohydrate binding domain (family 15)
CBM_17_28 PF03424 Domain 6 32 192 53 24.24 Changed Carbohydrate binding domain (family 17/28)
CBM_19 PF03427 Domain 2 197 60.1 27 14.2 Changed Carbohydrate binding domain (family 19)
CBM_2 PF00553 Domain 13 7300 98.1 32 17.74 Changed Cellulose binding domain
CBM_20 PF00686 Family 50 6020 93.3 24 15.27 Changed Starch binding domain
CBM_21 PF03370 Domain 52 3905 110.6 32 21.48 Changed Carbohydrate/starch-binding module (family 21)
CBM_25 PF03423 Domain 2 532 102.4 37 17.67 Changed Carbohydrate binding domain (family 25)
CBM_26 PF16824 Family 5 64 124.9 35 26.24 Changed C-terminal carbohydrate-binding module
CBM_3 PF00942 Domain 126 1146 82.2 24 11.28 Changed Cellulose binding domain
CBM_35 PF16990 Domain 5 1700 124.8 25 17.2 Changed Carbohydrate binding module (family 35)
CBM_48 PF02922 Domain 35 18760 85.4 26 11.57 Changed Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
CBM_4_9 PF02018 Domain 47 6550 134.1 17 23.39 Changed Carbohydrate binding domain
CBM_5_12 PF02839 Family 38 807 25.3 50 4.51 Changed Carbohydrate binding domain
CBM_5_12_2 PF14600 Domain 10 195 59 47 7.11 Changed Cellulose-binding domain
CBM_6 PF03422 Family 34 6407 121.9 21 16.58 Changed Carbohydrate binding module (family 6)
CBM_X2 PF03442 Domain 66 1222 84.1 31 13.91 Changed Carbohydrate binding domain X2
CBP PF12192 Domain 4 104 71.3 33 50.14 Changed Fungal calcium binding protein
CBP110 PF19042 Family 7 18 996.3 39 89.68 Changed Nuclear cap binding complex subunit CBP110
CBP30 PF19041 Family 5 24 223.6 42 98.3 Changed Nuclear cap binding complex subunit CBP30
CBP4 PF07960 Family 34 636 108.6 31 85.27 Changed CBP4
CBP66 PF19043 Family 6 21 512.6 42 87.77 Changed Nuclear cap binding complex subunit CBP66
CBP_BcsF PF11120 Family 4 70 59.6 41 92.65 Changed Cellulose biosynthesis protein BcsF
CBP_BcsG PF11658 Family 18 197 471.6 43 94.55 Changed Cellulose biosynthesis protein BcsG
CBP_BcsN PF17038 Family 24 146 178.7 31 55.08 Changed Cellulose biosynthesis protein BcsN
CBP_BcsO PF17037 Family 2 52 165.6 25 88.29 Changed Cellulose biosynthesis protein BcsO
CBP_BcsQ PF06564 Domain 9 617 207.5 23 67.44 Changed Cellulose biosynthesis protein BcsQ
CBP_BcsR PF10945 Family 6 103 41.3 46 57.11 Changed Cellulose biosynthesis protein BcsR
CBP_BcsS PF17036 Domain 17 145 206.7 24 82.45 Changed Cellulose biosynthesis protein BcsS
CBP_CCPA PF17040 Family 2 3 117.7 64 35.91 Changed Cellulose-complementing protein A
CBP_GIL PF10995 Family 26 177 481.5 27 95.96 Changed Cellulose biosynthesis GIL
CBS PF00571 Domain 840 185434 57.8 19 24.78 Changed CBS domain
CbtA PF09490 Family 73 1272 230.1 30 92.39 Changed Probable cobalt transporter subunit (CbtA)
CbtA_toxin PF06755 Family 3 70 102.7 46 71.54 Changed CbtA_toxin of type IV toxin-antitoxin system
CbtB PF09489 Family 22 1274 56 36 82.84 Changed Probable cobalt transporter subunit (CbtB)
CBX7_C PF17218 Motif 51 1897 32.6 48 7.97 Changed CBX family C-terminal motif
CC PF04942 Domain 40 248 33.1 32 12.25 Changed CC domain
CC149 PF09789 Coiled-coil 16 892 267.1 55 59.9 Changed Coiled-coil domain-containing protein 149-A
CC190 PF15768 Family 12 172 220.9 44 86.97 Changed Coiled-coil domain-containing protein 190
CC2-LZ PF16516 Coiled-coil 21 1459 102.4 35 20.39 Changed Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator
CC2D2AN-C2 PF15625 Domain 36 821 163.8 41 11.94 Changed CC2D2A N-terminal C2 domain
CCAP PF11105 Family 6 110 97.8 30 79.99 Changed Arthropod cardioacceleratory peptide 2a
CCB1 PF12046 Family 55 399 159.5 42 72.69 Changed Cofactor assembly of complex C subunit B
CCB2_CCB4 PF11152 Family 58 715 189.3 34 71.39 Changed Cofactor assembly of complex C subunit B, CCB2/CCB4
CCCAP PF15964 Family 5 981 435.9 36 83.69 Changed Centrosomal colon cancer autoantigen protein family
CCD PF07860 Family 1 2 100 93 4.49 Changed WisP family C-Terminal Region
CCD48 PF15799 Family 4 817 208.5 22 92.77 Changed Coiled-coil domain-containing protein 48
CCD97-like_C PF09747 Coiled-coil 57 1664 134 24 57.27 Changed Coiled-coil domain containing protein 97-like, C-terminal
CcdA PF07362 Domain 47 883 66 26 77.28 Changed Post-segregation antitoxin CcdA
CcdB PF01845 Domain 43 630 96.4 32 95.91 Changed CcdB protein
CCDC-167 PF15188 Coiled-coil 19 346 80.2 45 71.16 Changed Coiled-coil domain-containing protein 167
CCDC106 PF15794 Family 7 669 200.2 39 67.6 Changed Coiled-coil domain-containing protein 106
CCDC117 PF15810 Family 9 383 135.8 49 52.54 Changed Coiled-coil domain-containing protein 117
Ccdc124 PF06244 Family 49 1628 87.8 43 37.06 Changed Coiled-coil domain-containing protein 124 /Oxs1
CCDC14 PF15254 Coiled-coil 12 513 488.8 32 85.78 Changed Coiled-coil domain-containing protein 14
CCDC142 PF14923 Coiled-coil 8 423 367.4 29 48.77 Changed Coiled-coil protein 142
CCDC144C PF14915 Coiled-coil 32 961 262.7 44 20.38 Changed CCDC144C protein coiled-coil region
CCDC154 PF15450 Family 8 221 401.3 45 67.94 Changed Coiled-coil domain-containing protein 154
CCDC158 PF15921 Coiled-coil 3 709 549.7 34 90.74 Changed Coiled-coil domain-containing protein 158
CCDC168_N PF15804 Repeat 6 860 138.1 16 31.81 Changed Coiled-coil domain-containing protein 168
CCDC22 PF05667 Family 30 1159 336.4 26 88.84 Changed Coiled-coil domain-containing protein 22
CCDC23 PF15674 Family 7 237 60.9 67 53.21 Changed Coiled-coil domain-containing protein 23
CCDC24 PF15669 Family 23 419 172.5 36 51.16 Changed Coiled-coil domain-containing protein 24 family
CCDC28 PF13270 Family 17 857 86.3 56 37.59 Changed Coiled-coil domain-containing protein 28
CCDC32 PF14989 Coiled-coil 18 476 134 43 70.88 Changed Coiled-coil domain containing 32
CCDC34 PF13904 Family 23 641 197.4 24 54.25 Changed Coiled-coil domain-containing protein 3
CCDC47 PF07946 Family 153 1882 308.8 29 70.6 Changed PAT complex subunit CCDC47
CCDC50_N PF15295 Coiled-coil 10 887 119.2 46 25.05 Changed Coiled-coil domain-containing protein 50 N-terminus
CCDC53 PF10152 Coiled-coil 52 1875 100 25 33.07 Changed Subunit CCDC53 of WASH complex
CCDC66 PF15236 Coiled-coil 12 585 146.5 49 16.98 Changed Coiled-coil domain-containing protein 66
CCDC71L PF15374 Coiled-coil 11 469 231.5 34 79.42 Changed Coiled-coil domain-containing protein 71L
CCDC73 PF15818 Family 6 469 507.8 36 82.12 Changed Coiled-coil domain-containing protein 73 family
CCDC74_C PF14917 Coiled-coil 8 286 105.2 45 34.93 Changed Coiled coil protein 74, C terminal
CCDC84 PF14968 Coiled-coil 17 768 258.7 30 86.18 Changed Coiled coil protein 84
CCDC85 PF10226 Family 13 1321 184.3 59 46.69 Changed CCDC85 family
CCDC90-like PF07798 Family 89 2980 166 30 56.07 Changed Coiled-coil domain-containing protein 90-like
CCDC92 PF14916 Coiled-coil 16 997 54.9 40 16.84 Changed Coiled-coil domain of unknown function
CCDC93_CC PF09762 Coiled-coil 33 853 169.3 60 29.97 Changed CCDC93, coiled-coil domain
CCER1 PF15482 Coiled-coil 5 156 157.3 46 50.33 Changed Coiled-coil domain-containing glutamate-rich protein family 1
CCG PF02754 Family 58 28773 86.4 20 29.13 Changed Cysteine-rich domain
CclA_1 PF16942 Family 3 0 0 0 0 Changed Putative cyclic bacteriocin
CCM2_C PF16545 Domain 8 851 97.5 71 22.13 Changed Cerebral cavernous malformation protein, harmonin-homology
CcmB PF03379 Family 8 3060 212.2 36 95.6 Changed CcmB protein
CcmD PF04995 Family 100 1877 43.5 26 71.44 Changed Heme exporter protein D (CcmD)
CcmD_alt PF20077 Family 3 332 61.5 40 82.43 Changed CcmD family protein
CcmE PF03100 Family 214 3331 127.9 35 79.6 Changed CcmE
CcmF_C PF16327 Family 151 3349 301.7 30 46.39 Changed Cytochrome c-type biogenesis protein CcmF C-terminal
CcmH PF03918 Family 136 3029 139.4 32 83.73 Changed Cytochrome C biogenesis protein
CCP_MauG PF03150 Family 448 5277 164.6 31 39.98 Changed Di-haem cytochrome c peroxidase
CCSAP PF15748 Family 23 435 222.1 37 93.11 Changed Centriole, cilia and spindle-associated
CCSMST1 PF15013 Family 25 343 74.9 34 48.61 Changed CCSMST1 family
CCT PF06203 Motif 88 7820 43.6 51 10.88 Changed CCT motif
CD20 PF04103 Family 37 4706 130.5 19 43.25 Changed CD20-like family
CD225 PF04505 Family 114 4767 66.6 29 36.29 Changed Interferon-induced transmembrane protein
CD24 PF14984 Family 11 125 51.3 64 53.48 Changed CD24 protein
CD34_antigen PF06365 Family 15 1021 175 29 40.52 Changed CD34/Podocalyxin family
CD36 PF01130 Family 207 5103 354.3 24 81.87 Changed CD36 family
CD4-extracel PF09191 Domain 20 171 108.2 50 24.14 Changed CD4, extracellular
CD45 PF12567 Family 16 251 58.4 44 4.99 Changed Leukocyte receptor CD45
CD47 PF04549 Family 18 482 143.1 55 46.86 Changed CD47 transmembrane region
CD52 PF15116 Family 9 55 46.5 42 66.41 Changed CAMPATH-1 antigen
CD99L2 PF12301 Family 11 1026 144.6 33 73.56 Changed CD99 antigen like protein 2
CdaA_N PF19293 Family 31 2663 79.5 33 28.54 Changed CdaA N-terminal transmembrane domain
CdAMP_rec PF06153 Domain 10 1279 106.6 47 97.53 Changed Cyclic-di-AMP receptor
CDC13_N PF16853 Domain 13 26 209.1 25 24.26 Changed Cell division control protein 13 N-terminus
Cdc13_OB2 PF18691 Domain 5 12 112.9 25 13.11 Changed Cell division control protein 13, OB2 domain
Cdc13_OB4_dimer PF18233 Domain 4 22 114.8 23 13.56 Changed Cdc13 OB4 dimerization domain
CDC14 PF08045 Family 41 921 213.2 31 66.85 Changed Cell division control protein 14, SIN component
CDC24 PF06395 Domain 16 809 89.4 39 9.76 Changed CDC24 Calponin
CDC24_OB1 PF17246 Domain 29 314 116.2 42 19.23 Changed Cell division control protein 24, OB domain 1
CDC24_OB2 PF17245 Domain 29 329 126.5 48 21.13 Changed Cell division control protein 24, OB domain 2
CDC24_OB3 PF17244 Domain 26 408 204.3 29 36.71 Changed Cell division control protein 24, OB domain 3
CDC27 PF09507 Family 10 1753 367.3 20 82.1 Changed DNA polymerase subunit Cdc27
CDC37_C PF08564 Domain 28 1441 87.2 29 19.64 Changed Cdc37 C terminal domain
CDC37_M PF08565 Domain 52 1782 112.2 35 26.38 Changed Cdc37 Hsp90 binding domain
CDC37_N PF03234 Domain 101 1392 147.7 30 33.13 Changed Cdc37 N terminal kinase binding
CDC45 PF02724 Family 110 3229 343.8 22 92.18 Changed CDC45-like protein
CDC48_2 PF02933 Domain 77 5392 67.5 31 8.8 Changed Cell division protein 48 (CDC48), domain 2
CDC48_N PF02359 Domain 97 4790 82.9 34 10.93 Changed Cell division protein 48 (CDC48), N-terminal domain
CDC4_D PF16856 Domain 26 64 50.3 36 6.8 Changed Cell division control protein 4 dimerisation domain
CDC50 PF03381 Family 290 3883 267.1 35 73.48 Changed LEM3 (ligand-effect modulator 3) family / CDC50 family
Cdc6_C PF09079 Domain 181 2533 79.8 21 14.32 Changed CDC6, C terminal winged helix domain
CDC73_C PF05179 Domain 127 1785 158.1 37 34.43 Changed RNA pol II accessory factor, Cdc73 family, C-terminal
CDC73_N PF16050 Family 16 1109 216.8 42 49.42 Changed Paf1 complex subunit CDC73 N-terminal
CDCA PF18484 Repeat 6 16 187.2 29 59.24 Changed Cadmium carbonic anhydrase repeat
Cdd1 PF11731 Family 26 394 83.9 34 68.71 Changed Pathogenicity locus
CDH PF02611 Family 36 335 209.9 33 80.75 Changed CDP-diacylglycerol pyrophosphatase
CDH-cyt PF16010 Family 152 2488 169.9 23 32.97 Changed Cytochrome domain of cellobiose dehydrogenase
CDH1_2_SANT_HL1 PF18375 Domain 12 1421 87.5 62 5.34 Changed CDH1/2 SANT-Helical linker 1
Cdh1_DBD_1 PF18196 Domain 6 377 90.5 29 6.03 Changed Chromodomain helicase DNA-binding domain 1
CdhC PF03598 Domain 59 334 154 43 24.77 Changed CO dehydrogenase/acetyl-CoA synthase complex beta subunit
CdhD PF03599 Family 9 694 292.4 23 72.12 Changed CO dehydrogenase/acetyl-CoA synthase delta subunit
CDI PF02234 Family 101 2479 48.7 35 23.9 Changed Cyclin-dependent kinase inhibitor
CdiA_C PF18451 Domain 38 260 79.4 22 15.49 Changed Contact-dependent growth inhibition CdiA C-terminal domain
CdiA_C_tRNase PF18664 Domain 5 25 107.5 30 18.38 Changed CdiA C-terminal tRNase domain
CdiI PF07262 Family 9 80 144.9 23 86.03 Changed CDI immunity protein
CdiI_2 PF18593 Domain 30 298 88.1 23 64.37 Changed CdiI immunity protein
CdiI_3 PF18616 Domain 20 199 90.5 30 67.06 Changed CDI immunity proteins
CdiI_4 PF18624 Domain 8 60 97.2 28 80.8 Changed CDI immunity protein
CdiI_N PF18228 Domain 6 40 104.2 37 75.46 Changed CdiI N-terminal domain
CDK2AP PF09806 Family 8 886 113.1 43 71.35 Changed Cyclin-dependent kinase 2-associated protein
CDK5RAP3 PF05600 Family 44 1200 385.2 32 92.6 Changed CDK5 regulatory subunit-associated protein 3
CDK5_activator PF03261 Family 8 1010 204.8 47 67.47 Changed Cyclin-dependent kinase 5 activator protein
CDKN3 PF05706 Domain 2 1046 129 33 59.22 Changed Cyclin-dependent kinase inhibitor 3 (CDKN3)
CDO_I PF05995 Domain 3 3512 143.4 25 68.77 Changed Cysteine dioxygenase type I
CDP-OH_P_transf PF01066 Family 230 32088 176.3 18 66.71 Changed CDP-alcohol phosphatidyltransferase
CDP-OH_P_tran_2 PF08009 Domain 38 768 36.7 35 13.1 Changed CDP-alcohol phosphatidyltransferase 2
CDPS PF16715 Domain 15 235 202.1 29 85.11 Changed Cyclodipeptide synthase
CDRT4 PF15213 Family 12 133 129.1 55 71.88 Changed CMT1A duplicated region transcript 4 protein
CDT1 PF08839 Domain 43 1505 147.8 21 21.91 Changed DNA replication factor CDT1 like
CDT1_C PF16679 Domain 96 1594 99.7 25 18.02 Changed DNA replication factor Cdt1 C-terminal domain
CDtoxinA PF03498 Domain 10 109 133.9 22 54.14 Changed Cytolethal distending toxin A/C domain
CDV3 PF15359 Family 17 660 117.6 49 54.62 Changed Carnitine deficiency-associated protein 3
CdvA PF18822 Coiled-coil 23 49 122.7 30 47.88 Changed CdvA-like coiled-coil domain
CE2_N PF17996 Domain 58 1059 105.8 21 24.11 Changed Carbohydrate esterase 2 N-terminal
CEBP1_N PF16368 Family 8 741 248.6 61 46.73 Changed Cytoplasmic polyadenylation element-binding protein 1 N-terminus
CEBP_ZZ PF16366 Domain 26 3237 61.6 67 10.06 Changed Cytoplasmic polyadenylation element-binding protein ZZ domain
CECR6_TMEM121 PF14997 Family 14 932 188.8 36 52.29 Changed CECR6/TMEM121 family
Cecropin PF00272 Family 21 162 30.1 44 44.25 Changed Cecropin family
CecR_C PF09209 Domain 28 805 122.6 18 53.39 Changed HTH-type transcriptional dual regulator CecR, C-terminal domain
CedA PF10729 Domain 2 39 74.7 76 92.36 Changed Cell division activator CedA
cEGF PF12662 Domain 523 17925 23.9 49 2.09 Changed Complement Clr-like EGF-like
CelD_N PF02927 Domain 108 1805 85.5 26 11.41 Changed Cellulase N-terminal ig-like domain
Cellsynth_D PF03500 Family 2 174 124.6 27 80.38 Changed Cellulose synthase subunit D
Cellulase PF00150 Domain 65 21141 282.2 13 54.7 Changed Cellulase (glycosyl hydrolase family 5)
Cellulase-like PF12876 Domain 6 152 253.4 29 70.86 Changed Sugar-binding cellulase-like
Cellulose_synt PF03552 Family 12 11666 387.3 28 69.45 Changed Cellulose synthase
CelTOS PF18659 Domain 9 32 115.6 44 63.53 Changed Cell-traversal protein for ookinetes and sporozoites
CEL_III_C PF18054 Domain 1 8 151.8 28 31.57 Changed CEL-III C-terminal
CemA PF03040 Family 48 709 191 35 56.13 Changed CemA family
Cementoin PF10511 Family 7 125 16.9 72 27.78 Changed Trappin protein transglutaminase binding domain
CEND1 PF15677 Family 7 186 133.1 50 95.21 Changed Cell cycle exit and neuronal differentiation protein 1
CENP-B_dimeris PF09026 Domain 1 117 92.5 63 18.64 Changed Centromere protein B dimerisation domain
CENP-B_N PF04218 Domain 5 3214 51.6 26 10.89 Changed CENP-B N-terminal DNA-binding domain
CENP-C_C PF11699 Domain 10 1189 83.9 34 11.96 Changed Mif2/CENP-C like
CENP-C_mid PF15620 Family 17 213 215 56 27.01 Changed Centromere assembly component CENP-C middle DNMT3B-binding region
CENP-F_C_Rb_bdg PF10490 Domain 8 345 45.4 59 1.94 Changed Rb-binding domain of kinetochore protein Cenp-F/LEK1
CENP-F_leu_zip PF10473 Coiled-coil 26 600 137.2 32 11.14 Changed Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
CENP-F_N PF10481 Coiled-coil 10 406 244.4 50 12.1 Changed Cenp-F N-terminal domain
CENP-H PF05837 Domain 68 734 114.9 26 46.95 Changed Centromere protein H (CENP-H)
CENP-I PF07778 Family 5 1076 363.8 26 59.9 Changed Mis6
CENP-K PF11802 Family 15 526 195.9 35 85.1 Changed Centromere-associated protein K
CENP-L PF13092 Family 74 845 165.6 27 43.2 Changed Kinetochore complex Sim4 subunit Fta1
CENP-M PF11111 Family 13 471 143.2 46 86.51 Changed Centromere protein M (CENP-M)
CENP-N PF05238 Family 27 1088 332.4 25 91.74 Changed Kinetochore protein CHL4 like
CENP-O PF09496 Family 59 1017 179.3 24 56.19 Changed Cenp-O kinetochore centromere component
CENP-P PF13096 Family 3 379 131 41 57.74 Changed CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P
CENP-Q PF13094 Family 78 670 162.1 25 42.34 Changed CENP-Q, a CENPA-CAD centromere complex subunit
CENP-R PF06729 Family 10 274 128.1 51 73.69 Changed Kinetochore component, CENP-R
CENP-S PF15630 Domain 39 1168 73.5 40 46.02 Changed CENP-S protein
CENP-T_C PF15511 Domain 9 4215 84.2 57 41.61 Changed Centromere kinetochore component CENP-T histone fold
CENP-T_N PF16171 Family 12 258 316.7 43 69.41 Changed Centromere kinetochore component CENP-T N-terminus
CENP-U PF13097 Family 21 306 173.2 32 40.29 Changed CENP-A nucleosome associated complex (NAC) subunit
CENP-W PF15510 Domain 2 352 72 45 87.57 Changed CENP-W protein
CENP-X PF09415 Domain 81 1081 70.1 36 48.24 Changed CENP-S associating Centromere protein X
CENP_C_N PF15622 Family 13 209 246.5 56 28.11 Changed Kinetochore assembly subunit CENP-C N-terminal
Centro_C10orf90 PF17730 Family 16 320 355.2 35 66.16 Changed Centrosomal C10orf90
CEP1-DNA_bind PF09287 Domain 2 7 198.1 47 32.26 Changed CEP-1, DNA binding
CEP170_C PF15308 Family 19 1711 528.6 45 44.3 Changed CEP170 C-terminus
CEP19 PF14933 Family 16 475 138.2 42 69.47 Changed CEP19-like protein
CEP209_CC5 PF16574 Coiled-coil 12 489 127.2 63 5.69 Changed Coiled-coil region of centrosome protein CE290
Cep3 PF16846 Family 14 86 282.9 22 44.15 Changed Centromere DNA-binding protein complex CBF3 subunit B
CEP44 PF15007 Family 24 592 122 50 29.36 Changed Centrosomal spindle body, CEP44
Cep57_CLD PF14073 Coiled-coil 28 964 159.6 51 36.9 Changed Centrosome localisation domain of Cep57
Cep57_CLD_2 PF14197 Coiled-coil 22 502 71.5 29 8.1 Changed Centrosome localisation domain of PPC89
Cep57_MT_bd PF06657 Domain 79 1376 74.6 34 10.72 Changed Centrosome microtubule-binding domain of Cep57
CEP63 PF17045 Coiled-coil 9 1041 224.4 47 41.86 Changed Centrosomal protein of 63 kDa
CEP76-C2 PF15627 Domain 21 499 153.1 57 23.2 Changed CEP76 C2 domain
Ceramidase PF05875 Family 151 3628 222.7 23 83.9 Changed Ceramidase
Ceramidase_alk PF04734 Domain 113 3497 387.5 33 65.02 Changed Neutral/alkaline non-lysosomal ceramidase, N-terminal
Ceramidse_alk_C PF17048 Domain 126 2319 159 35 22.85 Changed Neutral/alkaline non-lysosomal ceramidase, C-terminal
Cerato-platanin PF07249 Family 4 1031 116.3 41 72.27 Changed Cerato-platanin
CERK_C PF19280 Domain 16 1364 193.5 33 37.98 Changed Ceramide kinase C-terminal domain
CesT PF05932 Domain 24 730 115.7 15 64.31 Changed Tir chaperone protein (CesT) family
CF222 PF15661 Family 10 190 380.8 33 87.68 Changed C6orf222, uncharacterised family
CFA20_dom PF05018 Domain 33 2842 156.3 32 28.25 Changed CFA20 domain
CfaA_B_C PF11912 Family 51 165 207.5 16 79.36 Changed Counting factor-associated protein A/B/C
CfAFP PF05264 Family 4 0 0 0 0 Changed Choristoneura fumiferana antifreeze protein (CfAFP)
CFAP298 PF11069 Family 33 813 79.9 52 28 Changed Cilia- and flagella-associated protein 298
CFAP300 PF14926 Family 31 571 199.3 40 79.94 Changed Cilia- and flagella-associated protein 300
CFAP54_N PF14858 Family 8 525 307.3 34 20.34 Changed Cilia- and flagella-associated protein 54
CFAP61_N PF16092 Domain 35 738 214.8 29 22.64 Changed Cilia- and flagella-associated protein 61, N-terminal domain
CFAP77 PF14825 Family 28 488 139.3 31 51.04 Changed Cilia- and flagella-associated protein 77
CFAP91 PF14738 Domain 45 676 147.4 44 21.11 Changed Cilia- and flagella-associated protein 91
CFC PF09443 Domain 21 427 34.6 50 17.91 Changed Cripto_Frl-1_Cryptic (CFC)
CFEM PF05730 Domain 94 6245 66.5 25 21.97 Changed CFEM domain
CFIA_Pcf11 PF11526 Family 34 501 74.5 26 9.99 Changed Subunit of cleavage factor IA Pcf11
CFSR PF19079 Repeat 9 299 48.5 52 26.6 Changed Collagen-flanked surface repeat
CFTR_R PF14396 Domain 14 564 211.8 58 15.1 Changed Cystic fibrosis TM conductance regulator (CFTR), regulator domain
CG-1 PF03859 Domain 26 2946 107.1 54 9.85 Changed CG-1 domain
Cg6151-P PF10233 Domain 81 1132 108.4 34 63.02 Changed Uncharacterized conserved protein CG6151-P
CGGC PF08821 Domain 86 407 106.2 29 87.14 Changed CGGC domain
CGI-121 PF08617 Domain 149 1824 155.2 27 79.46 Changed Kinase binding protein CGI-121
CGLD27-like PF06799 Family 56 618 134.6 50 54.2 Changed Conserved in the green lineage and diatoms 27
Cgr1 PF03879 Coiled-coil 65 1458 102.8 31 57.92 Changed Cgr1 family
CgtA PF06306 Family 2 39 242.3 23 73.93 Changed Beta-1,4-N-acetylgalactosaminyltransferase (CgtA)
CH PF00307 Domain 121 81050 107.7 20 9.91 Changed Calponin homology (CH) domain
ChaB PF06150 Domain 73 923 57.2 43 47.44 Changed ChaB
ChaC PF04752 Family 9 4339 166.1 34 77.56 Changed ChaC-like protein
CHAD PF05235 Domain 303 3627 229.2 22 55.99 Changed CHAD domain
Chalcone PF02431 Domain 8 785 182.2 35 78.28 Changed Chalcone-flavanone isomerase
Chalcone_2 PF16035 Domain 81 1289 172.7 28 50.53 Changed Chalcone isomerase like
Chalcone_3 PF16036 Domain 51 1509 157.9 21 76.46 Changed Chalcone isomerase-like
Chalcone_N PF18232 Domain 8 26 99 45 35.26 Changed Chalcone isomerase N-terminal domain
Chal_sti_synt_C PF02797 Domain 6 5416 139.5 31 36.99 Changed Chalcone and stilbene synthases, C-terminal domain
Chal_sti_synt_N PF00195 Domain 5 5433 191.6 31 52.66 Changed Chalcone and stilbene synthases, N-terminal domain
Channel_Tsx PF03502 Family 15 540 233.8 22 87.8 Changed Nucleoside-specific channel-forming protein, Tsx
CHAP PF05257 Domain 473 4327 91.1 21 24.13 Changed CHAP domain
Chaperone_III PF07824 Domain 3 17 103.6 43 93.32 Changed Type III secretion chaperone domain
ChapFlgA PF13144 Family 52 2961 117.7 23 49.73 Changed Chaperone for flagella basal body P-ring formation
ChapFlgA_N PF17656 Domain 45 1027 74.7 25 29.87 Changed FlgA N-terminal domain
ChAPs PF09295 Repeat 13 1219 300.4 34 46.57 Changed ChAPs (Chs5p-Arf1p-binding proteins)
CHASE PF03924 Domain 178 4120 176.9 19 20.08 Changed CHASE domain
CHASE2 PF05226 Domain 396 3786 330 19 46.77 Changed CHASE2 domain
CHASE3 PF05227 Domain 116 4362 136.4 19 20.27 Changed CHASE3 domain
CHASE4 PF05228 Domain 131 1229 158.5 15 22.78 Changed CHASE4 domain
CHASE5 PF17149 Domain 3 369 107.5 24 16.22 Changed Periplasmic sensor domain found in signal transduction proteins
CHASE6_C PF17150 Family 62 248 83.7 40 14.65 Changed C-terminal domain of two-partite extracellular sensor domain
CHASE7 PF17151 Domain 6 57 176.9 38 34 Changed Periplasmic sensor domain
CHASE8 PF17152 Family 38 882 105.8 20 16.09 Changed Periplasmic sensor domain
CHASE9 PF17153 Family 3 2 116 99 14.83 Changed Periplasmic sensor domain, extracellular
CHAT PF12770 Domain 52 12007 275.4 19 27.29 Changed CHAT domain
CHB_HEX PF03173 Domain 19 505 149.4 22 17.47 Changed Putative carbohydrate binding domain
CHB_HEX_C PF03174 Domain 29 510 76.5 34 8.92 Changed Chitobiase/beta-hexosaminidase C-terminal domain
CHB_HEX_C_1 PF13290 Domain 90 3841 67.6 26 8.82 Changed Chitobiase/beta-hexosaminidase C-terminal domain
CHCH PF06747 Domain 48 4168 35.5 27 22.92 Changed CHCH domain
CHD5 PF04420 Family 108 1567 148.1 27 70.89 Changed CHD5-like protein
CHDCT2 PF08074 Domain 10 2503 140.6 82 7.85 Changed CHDCT2 (NUC038) domain
CHDII_SANT-like PF06461 Domain 14 2905 137.2 68 7.93 Changed CHD subfamily II, SANT-like domain
CHDNT PF08073 Domain 17 2414 52.7 73 2.87 Changed CHDNT (NUC034) domain
CheB_methylest PF01339 Domain 879 9409 176.2 34 35.34 Changed CheB methylesterase
CheC PF04509 Domain 28 4310 37.5 37 22.96 Changed CheC-like family
CheD PF03975 Family 278 2999 104 31 56.66 Changed CheD chemotactic sensory transduction
CheF-arch PF04283 Family 30 229 198.4 28 68.17 Changed Chemotaxis signal transduction system protein F from archaea
CheR PF01739 Domain 18 9610 191.2 31 40.57 Changed CheR methyltransferase, SAM binding domain
CheR_N PF03705 Domain 656 8044 52.4 22 10.72 Changed CheR methyltransferase, all-alpha domain
CheW PF01584 Domain 201 22268 135.6 20 32.25 Changed CheW-like domain
CheX PF13690 Domain 63 2156 96.4 22 49.95 Changed Chemotaxis phosphatase CheX
CheY-binding PF09078 Domain 29 340 62.5 38 9.27 Changed CheY binding
CheZ PF04344 Family 88 1667 172 30 73.68 Changed Chemotaxis phosphatase, CheZ
CHGN PF05679 Family 51 3568 398 25 61.11 Changed Chondroitin N-acetylgalactosaminyltransferase
Chi-conotoxin PF16981 Domain 50 0 0 0 0 Changed chi-Conotoxin or t superfamily
Chibby PF14645 Family 21 855 111.9 36 51.19 Changed Chibby family
ChiC PF06483 Family 21 320 170.4 45 19.58 Changed Chitinase C
CHIPS PF11434 Family 1 9 91 99 60.89 Changed Chemotaxis-inhibiting protein CHIPS
CHIP_TPR_N PF18391 Repeat 44 619 80.7 43 24.46 Changed CHIP N-terminal tetratricopeptide repeat domain
Chisel PF15355 Family 7 260 82.4 71 85.81 Changed Stretch-responsive small skeletal muscle X protein, Chisel
ChitinaseA_N PF08329 Domain 7 275 111.3 28 12.38 Changed Chitinase A, N-terminal domain
Chitin_bind_1 PF00187 Domain 162 5689 40.9 43 9.96 Changed Chitin recognition protein
Chitin_bind_4 PF00379 Family 85 11361 52.9 31 22.58 Changed Insect cuticle protein
Chitin_synth_1 PF01644 Family 93 2957 162.2 54 17.45 Changed Chitin synthase
Chitin_synth_1N PF08407 Family 125 2796 74.2 48 7.91 Changed Chitin synthase N-terminal
Chitin_synth_2 PF03142 Family 7 5504 382.4 31 32.42 Changed Chitin synthase
ChiW_Ig_like PF18683 Domain 1 22 103.7 42 11.16 Changed Chitinase W immunoglobulin-like domain
ChlamPMP_M PF07548 Family 8 32 144 22 21.16 Changed Chlamydia polymorphic membrane protein middle domain
Chlamy_scaf PF09675 Family 2 58 98.6 27 64.12 Changed Chlamydia-phage Chp2 scaffold (Chlamy_scaf)
Chlam_OMP PF01308 Domain 2 11 211.9 22 65.39 Changed Chlamydia major outer membrane protein
Chlam_OMP3 PF03503 Family 1 4 53 77 60.57 Changed Chlamydia cysteine-rich outer membrane protein 3
Chlam_OMP6 PF03504 Family 2 4 88.2 58 17.61 Changed Chlamydia cysteine-rich outer membrane protein 6
Chlam_PMP PF02415 Repeat 524 712 20.4 45 4.54 Changed Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat
Chlam_vir PF05475 Domain 3 5 138.4 36 38.94 Changed Pgp3 C-terminal domain
ChlI PF13541 Domain 81 13165 111.2 31 23.27 Changed Subunit ChlI of Mg-chelatase
Chloroa_b-bind PF00504 Family 157 7942 139.3 28 58.45 Changed Chlorophyll A-B binding protein
Chlorophyllase PF07224 Family 4 665 221.4 29 68.92 Changed Chlorophyllase
Chlorophyllase2 PF12740 Family 22 1388 159.6 18 41.49 Changed Chlorophyllase enzyme
Chloroplast_duf PF14476 Family 21 959 245.7 52 74.08 Changed Petal formation-expressed
Chlorosome_CsmC PF11098 Family 3 12 138.6 69 98.69 Changed Chlorosome envelope protein C
Chlorovi_GP_rpt PF06598 Repeat 36 293 34.1 45 23.4 Changed Chlorovirus glycoprotein repeat
Chlor_dismutase PF06778 Domain 115 2465 192.6 38 75.42 Changed Chlorite dismutase
CHMI PF02962 Domain 84 1194 118.7 25 95.65 Changed 5-carboxymethyl-2-hydroxymuconate isomerase
CholecysA-Rec_N PF09193 Domain 3 171 48 65 11.32 Changed Cholecystokinin A receptor, N-terminal
Choline_bind_1 PF01473 Repeat 211 3660 18.1 33 6.4 Changed Putative cell wall binding repeat
Choline_bind_2 PF19085 Repeat 37 701 38.3 37 10.18 Changed Choline-binding repeat
Choline_bind_3 PF19127 Repeat 77 5867 43.4 35 17.35 Changed Choline-binding repeat
Choline_kinase PF01633 Family 31 6654 197.2 25 49.66 Changed Choline/ethanolamine kinase
Choline_kin_N PF04428 Family 20 538 70.5 42 9.55 Changed Choline kinase N terminus
Choline_sulf_C PF12411 Family 39 1085 53 50 9.95 Changed Choline sulfatase enzyme C terminal
Choline_transpo PF04515 Family 265 7794 306.9 26 50.55 Changed Plasma-membrane choline transporter
Chol_subst-bind PF09129 Domain 11 222 281.2 44 54.44 Changed Cholesterol oxidase, substrate-binding
Chondroitinas_B PF14592 Repeat 7 921 297.2 27 49.85 Changed Chondroitinase B
Chon_Sulph_att PF06566 Domain 7 202 233.7 56 39.72 Changed Chondroitin sulphate attachment domain
CHORD PF04968 Family 164 4072 60.2 47 35.55 Changed CHORD
Chordopox_A13L PF05961 Family 7 41 62.8 28 69.14 Changed Chordopoxvirus A13L protein
Chordopox_A15 PF05846 Family 6 33 89.7 37 94.9 Changed Chordopoxvirus A15 protein
Chordopox_A20R PF05941 Family 9 39 328.7 36 76.51 Changed Chordopoxvirus A20R protein
Chordopox_A30L PF06015 Family 7 38 69.7 44 87.77 Changed Chordopoxvirus A30L protein
Chordopox_A33R PF05966 Family 3 29 172.8 31 96.77 Changed Chordopoxvirus A33R protein
Chordopox_A35R PF05989 Family 7 29 169.5 35 95.44 Changed Chordopoxvirus A35R protein
Chordopox_E11 PF06138 Family 6 31 129.3 43 97.61 Changed Chordopoxvirus E11 protein
Chordopox_G2 PF05796 Family 9 37 213.4 40 95.26 Changed Chordopoxvirus protein G2
Chordopox_G3 PF06129 Family 10 45 105.7 33 96.77 Changed Chordopoxvirus G3 protein
Chordopox_L2 PF05803 Family 9 38 81.2 29 88.27 Changed Chordopoxvirus L2 protein
Chordopox_RPO7 PF05864 Family 6 36 62.9 72 99.82 Changed Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7)
Chorein_N PF12624 Family 175 8040 110.2 27 4.25 Changed N-terminal region of Chorein or VPS13
Chorion_1 PF01723 Family 5 339 133.2 28 83.51 Changed Chorion protein
Chorion_2 PF03964 Disordered 10 48 141.4 33 86.83 Changed Chorion family 2
Chorion_3 PF05387 Family 4 51 179 30 85.56 Changed Chorion family 3
Chorion_S16 PF05836 Family 5 19 104.8 70 76.37 Changed Chorion protein S16
Chorismate_bind PF00425 Family 99 20753 250.9 34 49.84 Changed chorismate binding enzyme
Chorismate_synt PF01264 Family 664 9362 340 44 91.67 Changed Chorismate synthase
Chor_lyase PF04345 Domain 3 1111 167.8 29 90.81 Changed Chorismate lyase
ChpA-C PF03777 Domain 86 3450 57.6 48 49.93 Changed ChpA-C
ChpXY PF10216 Family 42 287 366.6 59 91.89 Changed CO2 hydration protein (ChpXY)
ChrB_N PF20229 Domain 33 629 136.4 27 57.65 New Protein ChrB, N-terminal
CHRD PF07452 Domain 172 3493 120.6 21 40.91 Changed CHRD domain
CHRDL_1_2_C PF19548 Domain 8 564 111 46 25.74 Changed Chordin-like protein 1/2 C-terminal
Chromadorea_ALT PF05535 Family 6 103 71.3 42 30.52 Changed Chromadorea ALT protein
Chromate_transp PF02417 Family 1321 13687 171.1 25 82.62 Changed Chromate transporter
Chrome_Resist PF09828 Family 73 910 131 44 52.06 Changed Chromate resistance exported protein
Chromo PF00385 Domain 82 31052 54.8 26 6.32 Changed Chromo (CHRromatin Organisation MOdifier) domain
Chromosome_seg PF13889 Family 44 1828 63.3 44 8.11 Changed Chromosome segregation during meiosis
Chromo_2 PF18704 Domain 40 382 63.1 44 8.07 Changed Chromatin organization modifier domain 2
Chromo_shadow PF01393 Domain 83 2768 52 46 23.9 Changed Chromo shadow domain
Chropara_Vmeth PF19223 Family 13 17 300.2 29 36.94 Changed Chroparavirus methyltransferase
CHS5_N PF16892 Domain 16 734 47.5 67 10.67 Changed Chitin biosynthesis protein CHS5 N-terminus
Chs7 PF12271 Family 92 1543 267 37 84.96 Changed Chitin synthase export chaperone
Churchill PF06573 Family 13 365 99.7 67 68.51 Changed Churchill protein
ChuX_HutX PF06228 Domain 82 667 131.6 25 53.94 Changed Haem utilisation ChuX/HutX
CHU_C PF13585 Domain 54 8879 87.5 28 6.63 Changed CHU_C Type IX secretion signal domain
ChW PF07538 Repeat 395 2238 35 41 22.28 Changed Clostridial hydrophobic W
CHZ PF09649 Domain 47 1132 33 40 12.26 Changed Histone chaperone domain CHZ
CH_2 PF06294 Domain 143 1790 93.9 32 13.69 Changed CH-like domain in sperm protein
CI-B14_5a PF07347 Family 33 512 90.5 41 61.11 Changed NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a)
CIA30 PF08547 Family 53 3745 157.2 22 50.62 Changed Complex I intermediate-associated protein 30 (CIA30)
CIAPIN1 PF05093 Family 58 2215 68.6 42 27.27 Changed Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis
Ciart PF15673 Family 4 422 192.2 44 54.63 Changed Circadian-associated transcriptional repressor
CID PF04818 Repeat 209 10977 120.8 21 14.8 Changed CID domain
CIDE-N PF02017 Domain 85 1898 73.1 38 25.31 Changed CIDE-N domain
CIDR1_gamma PF18562 Domain 34 700 54.5 39 2.85 Changed Cysteine-Rich Interdomain Region 1 gamma
CID_GANP PF16766 Family 13 317 69.2 49 3.73 Changed Binding region of GANP to ENY2
CIF PF16374 Family 2 10 121.2 32 12.81 Changed Cycle inhibiting factor (CIF)
cIII PF08134 Family 8 8 37 93 74.75 Changed cIII protein family
CIMR PF00878 Family 8 7737 136.9 25 79.3 Changed Cation-independent mannose-6-phosphate receptor repeat
CinA PF02464 Family 59 8939 153.4 35 60.1 Changed Competence-damaged protein
CinA_KH PF18146 Domain 63 2584 73.8 31 17.64 Changed Damage-inducible protein CinA KH domain
CiPC PF15800 Family 9 669 239 28 77.65 Changed Clock interacting protein circadian
Circovir2_Orf1 PF06615 Family 3 0 0 0 0 Changed Circovirus 2, Orf1
Circovir2_Orf4 PF07038 Family 2 0 0 0 0 Changed Circovirus 2, anti-apoptotic ORF4
Circovir_ORF3 PF05614 Family 2 0 0 0 0 Changed Circovirus ORF3
Circo_capsid PF02443 Domain 12 33 192.7 20 85.72 Changed Circovirus capsid protein
Cir_Bir_Yir PF06022 Family 492 1000 261.8 35 81.63 Changed Plasmodium variant antigen protein Cir/Yir/Bir
Cir_N PF10197 Domain 121 2997 37 37 9.46 Changed N-terminal domain of CBF1 interacting co-repressor CIR
CIS_spike_tip PF19267 Family 25 81 135.7 32 74.62 Changed Contractile injection system spike tip protein
CIS_TMP PF19268 Family 67 542 415.1 14 77.59 Changed Contractile injection system tape measure protein
CIS_tube PF19266 Family 102 1164 156.6 22 64.72 Changed Contractile injection system tube protein
CITED PF04487 Family 16 707 194.5 40 88.11 Changed CITED
CitF PF04223 Family 4 703 444.9 51 91.55 Changed Citrate lyase, alpha subunit (CitF)
CitG PF01874 Family 211 1499 258.8 27 85.2 Changed ATP:dephospho-CoA triphosphoribosyl transferase
CitMHS PF03600 Family 518 15680 357.2 15 85.54 Changed Citrate transporter
CitMHS_2 PF16980 Family 38 804 425.4 48 92.7 Changed Putative citrate transport
Citrate_bind PF16114 Domain 33 2545 168.1 61 22.68 Changed ATP citrate lyase citrate-binding
Citrate_ly_lig PF08218 Domain 11 575 176.7 43 48.51 Changed Citrate lyase ligase C-terminal domain
Citrate_synt PF00285 Domain 719 19007 324.2 30 71.34 Changed Citrate synthase, C-terminal domain
Citrus_P18 PF05520 Family 3 1 167 100 100 Changed Citrus tristeza virus P18 protein
CitT PF12431 Family 34 266 29.9 34 12.98 Changed Transcriptional regulator
CitX PF03802 Family 68 514 160.7 30 65.61 Changed Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
CK1gamma_C PF12605 Family 14 2635 62.4 56 16.03 Changed Casein kinase 1 gamma C terminal
CK2S PF15011 Family 29 765 149.1 27 61.48 Changed Casein Kinase 2 substrate
CKAP2_C PF15297 Family 12 986 185.1 23 46.17 Changed Cytoskeleton-associated protein 2 C-terminus
CKI PF17500 Family 3 0 0 0 0 Changed Colicin-K immunity
CKS PF01111 Domain 92 2328 69 61 53.69 Changed Cyclin-dependent kinase regulatory subunit
CK_II_beta PF01214 Domain 165 3981 182.8 51 65.55 Changed Casein kinase II regulatory subunit
CLAG PF03805 Family 8 144 768.5 36 85.23 Changed Cytoadherence-linked asexual protein
CLAMP PF14769 Family 59 1073 94.4 26 32.9 Changed Flagellar C1a complex subunit C1a-32
CLASP_N PF12348 Repeat 47 12830 198.8 22 22.75 Changed CLASP N terminal
Class_IIIsignal PF04021 Motif 39 132 26.4 33 24.12 Changed Class III signal peptide
Clathrin PF00637 Repeat 123 28302 140.6 17 36.25 Changed Region in Clathrin and VPS
Clathrin-link PF09268 Repeat 48 2623 23.9 58 1.52 Changed Clathrin, heavy-chain linker
Clathrin_bdg PF15045 Family 23 833 73.8 47 10.15 Changed Clathrin-binding box of Aftiphilin, vesicle trafficking
Clathrin_H_link PF13838 Repeat 54 3481 65.2 59 4.38 Changed Clathrin-H-link
Clathrin_lg_ch PF01086 Family 80 3032 201.7 27 82.07 Changed Clathrin light chain
Clathrin_propel PF01394 Repeat 49 9483 37.9 26 7.56 Changed Clathrin propeller repeat
Clat_adaptor_s PF01217 Domain 7 17353 133.9 25 49.18 Changed Clathrin adaptor complex small chain
Claudin_2 PF13903 Family 14 4802 178.1 19 72.91 Changed PMP-22/EMP/MP20/Claudin tight junction
Claudin_3 PF06653 Family 24 243 162.7 17 86.76 Changed Tight junction protein, Claudin-like
Clavanin PF05452 Family 2 0 0 0 0 Changed Clavanin
Clc-like PF07062 Family 5 447 173.2 25 64.91 Changed Clc-like
CLCA PF08434 Family 24 1321 216.6 40 28.58 Changed Calcium-activated chloride channel N terminal
Cleaved_Adhesin PF07675 Domain 4 640 143 16 21.19 Changed Cleaved Adhesin Domain
CLEC16A_C PF19439 Domain 8 1561 432.6 36 61.23 Changed CLEC16A C-terminal
Clenterotox PF03505 Family 4 9 171.7 34 56.28 Changed Clostridium enterotoxin
Clink PF19411 Family 1 3 143 65 89 Changed Cell cycle link protein Clink
CLIP PF12032 Domain 172 1123 53.5 28 14.1 Changed Regulatory CLIP domain of proteinases
CLIP1_ZNF PF16641 Family 32 3048 17.2 56 2.46 Changed CLIP1 zinc knuckle
CLIP_1 PF18322 Domain 38 537 54.3 30 12.49 Changed Serine protease Clip domain PPAF-2
CLIP_SPH_mas PF18398 Domain 64 556 33.9 37 19.54 Changed Clip-domain serine protease homolog masquerade
CLIP_SPH_Scar PF18399 Domain 20 131 65.1 54 6.02 Changed Clip-domain serine protease homolog Scarface
CLLAC PF15675 Family 8 188 29.8 64 9.82 Changed CLLAC-motif containing domain
CLN3 PF02487 Family 88 2303 300 31 80.2 Changed CLN3 protein
CLN5 PF15014 Family 9 321 273.6 67 85.87 Changed Ceroid-lipofuscinosis neuronal protein 5
CLN6 PF15156 Family 7 602 201.6 60 84.54 Changed Ceroid-lipofuscinosis neuronal protein 6
Cloacin PF03515 Family 5 7 241.6 40 53.36 Changed Colicin-like bacteriocin tRNase domain
Cloacin_immun PF03513 Family 4 18 79.7 48 68.59 Changed Cloacin immunity protein
Closter_coat PF01785 Family 11 74 183.4 17 59.09 Changed Closterovirus coat protein
Clostridium_P47 PF06597 Family 3 86 376.6 18 79.44 Changed Clostridium P-47 protein
Clp1 PF06807 Family 125 1634 116.4 33 24.65 Changed Pre-mRNA cleavage complex II protein Clp1
CLP1_N PF16573 Family 137 1695 93 41 19.49 Changed N-terminal beta-sandwich domain of polyadenylation factor
CLP1_P PF16575 Domain 76 3795 178.2 25 32.67 Changed mRNA cleavage and polyadenylation factor CLP1 P-loop
ClpB_D2-small PF10431 Domain 482 37267 81.5 27 11.95 Changed C-terminal, D2-small domain, of ClpB protein
ClpS PF02617 Family 239 8208 76.8 29 16.21 Changed ATP-dependent Clp protease adaptor protein ClpS
CLPTM1 PF05602 Family 124 2940 372.5 31 70.7 Changed Cleft lip and palate transmembrane protein 1 (CLPTM1)
Clp_N PF02861 Family 129 40759 50.4 24 11.95 Changed Clp amino terminal domain, pathogenicity island component
CLP_protease PF00574 Domain 64 21275 173.8 39 74.52 Changed Clp protease
Clr2 PF10383 Family 31 663 138.4 22 19.5 Changed Transcription-silencing protein Clr2
Clr2_transil PF16761 Family 68 866 68.2 35 10.8 Changed Transcription-silencing protein, cryptic loci regulator Clr2
Clr5 PF14420 Domain 248 3068 53.7 28 8.94 Changed Clr5 domain
CLSTN_C PF19699 Family 8 2138 297.1 43 37.3 Changed Calsyntenin C-terminal
CLU PF13236 Domain 109 2544 222.2 43 17.45 Changed Clustered mitochondria
Cluap1 PF10234 Family 39 975 234.5 52 62.2 Changed Clusterin-associated protein-1
Clusterin PF01093 Family 47 766 350.1 33 90.14 Changed Clusterin
CLU_N PF15044 Family 45 2475 74.1 41 5.42 Changed Mitochondrial function, CLU-N-term
CLZ PF16526 Coiled-coil 46 1837 70 47 11.06 Changed C-terminal leucine zipper domain of cyclic nucleotide-gated channels
CM1 PF03026 Family 1 2 235 42 61.76 Changed Influenza C virus M1 protein
CM2 PF03021 Family 1 2 144.5 33 37.98 Changed Influenza C virus M2 protein
CMAS PF02353 Family 12 11696 257.2 30 60.67 Changed Mycolic acid cyclopropane synthetase
Cmc1 PF08583 Family 46 2970 68 23 57.08 Changed Cytochrome c oxidase biogenesis protein Cmc1 like
CmcI PF04989 Family 11 470 195.5 37 71.36 Changed Cephalosporin hydroxylase
CMD PF02627 Family 168 27563 82.5 18 49.1 Changed Carboxymuconolactone decarboxylase family
CmlA_N PF18456 Domain 19 164 229 39 41.36 Changed Diiron non-heme beta-hydroxylase N-terminal domain
Cmr2_N PF12469 Domain 52 412 113.6 24 15.99 Changed CRISPR-associated protein Cmr2, N-terminal
Cmr7A PF19021 Family 1 2 156.5 32 73.3 Changed CRISPR system CMR subunit Cmr7 1
CMS1 PF14617 Family 4 1441 229.8 29 81.94 Changed U3-containing 90S pre-ribosomal complex subunit
CMV_1a PF12467 Family 2 7 161.7 45 16.49 Changed Cucumber mosaic virus 1a protein family
CMV_1a_C PF12503 Family 3 10 84.2 48 8.64 Changed Cucumber mosaic virus 1a protein C terminal
CMV_US PF08001 Family 3 20 187.6 21 75.29 Changed CMV US
Cmyb_C PF09316 Family 19 1781 147.8 48 22.24 Changed C-myb, C-terminal
CM_1 PF07736 Domain 149 1427 115.4 45 92.19 Changed Chorismate mutase type I
CM_2 PF01817 Domain 775 9719 77.5 26 31.88 Changed Chorismate mutase type II
Cm_res_leader PF08077 Family 1 2 17 94 89.47 Changed Chloramphenicol resistance gene leader peptide
Cna_B PF05738 Domain 178 3032 89.4 28 26.63 Changed Cna protein B-type domain
Cnd1 PF12717 Repeat 148 3257 161 27 13.58 Changed non-SMC mitotic condensation complex subunit 1
Cnd1_N PF12922 Repeat 123 1678 161.6 25 12.63 Changed non-SMC mitotic condensation complex subunit 1, N-term
Cnd2 PF05786 Family 49 2784 472 22 91.35 Changed Condensin complex subunit 2
Cnd3 PF12719 Repeat 119 1916 286.6 24 29.2 Changed Nuclear condensing complex subunits, C-term domain
CNDH2_C PF16858 Family 21 990 260.3 25 41.52 Changed Condensin II complex subunit CAP-H2 or CNDH2, C-term
CNDH2_M PF16869 Family 9 549 137.4 26 22.28 Changed Condensin II complex subunit CAP-H2 or CNDH2, mid domain
CNDH2_N PF06278 Family 29 873 110.7 43 18.51 Changed Condensin II complex subunit CAP-H2 or CNDH2, N-terminal
CNF1 PF05785 Domain 3 25 248.3 22 24.98 Changed Rho-activating domain of cytotoxic necrotizing factor
CNH PF00780 Family 47 16320 264.6 23 22.79 Changed CNH domain
CNK2_3_dom PF06663 Domain 16 1453 159.1 46 19.98 Changed Connector enhancer of kinase suppressor of ras 2/3 domain
Cnl2_NKP2 PF09447 Family 51 423 64.9 46 30.96 Changed Cnl2/NKP2 family protein
cNMPbd_u2 PF16643 Disordered 26 421 152.2 34 15.59 Changed Unstructured region on cNMP-binding protein
cNMP_binding PF00027 Domain 210 87173 88.2 20 19.4 Changed Cyclic nucleotide-binding domain
CNNM PF01595 Domain 82 23479 182.7 22 39.18 Changed Cyclin M transmembrane N-terminal domain
Cnn_1N PF07989 Coiled-coil 79 2653 73.1 39 5.32 Changed Centrosomin N-terminal motif 1
CNOT11 PF10155 Family 41 1268 121.3 55 28.05 Changed CCR4-NOT transcription complex subunit 11
CNOT1_CAF1_bind PF16415 Repeat 77 2874 210.4 47 10.51 Changed CCR4-NOT transcription complex subunit 1 CAF1-binding domain
CNOT1_HEAT PF16418 Domain 121 2448 148 35 6.91 Changed CCR4-NOT transcription complex subunit 1 HEAT repeat
CNOT1_HEAT_N PF16419 Repeat 24 71 228.4 34 10.87 Changed CCR4-NOT transcription complex subunit 1 HEAT repeat
CNOT1_TTP_bind PF16417 Repeat 27 2646 178.2 39 8.42 Changed CCR4-NOT transcription complex subunit 1 TTP binding domain
CNP1 PF08750 Family 34 329 136.3 32 74.44 Changed CNP1-like family
CNPase PF05881 Family 6 436 207 47 45.78 Changed 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase)
CNP_C_terminal PF17839 Domain 26 149 105.6 22 24.07 Changed C-terminal domain of cyclic nucleotide phosphodiesterase
CNRIP1 PF15043 Family 15 509 144.2 48 78.9 Changed CB1 cannabinoid receptor-interacting protein 1
CnrY PF17524 Family 2 3 94.7 46 100 Changed Anti-sigma factor CnrY
CNTF PF01110 Domain 6 248 184.4 37 83.36 Changed Ciliary neurotrophic factor
CNV-Replicase_N PF16688 Domain 1 15 108.3 73 1.99 Changed Replicase polyprotein N-term from Coronavirus nsp1
CN_hydrolase PF00795 Family 52 44598 249.8 19 62.34 Changed Carbon-nitrogen hydrolase
Coa1 PF08695 Family 36 1597 113.1 22 58.13 Changed Cytochrome oxidase complex assembly protein 1
COA2 PF17051 Family 2 108 69.5 27 74.52 Changed Cytochrome C oxidase assembly factor 2
Coa3_cc PF09813 Coiled-coil 94 1161 49 37 41.87 Changed Cytochrome c oxidase assembly factor 3
COA8 PF10231 Family 32 715 120.6 36 54.07 Changed Cytochrome c oxidase assembly factor 8
CoaE PF01121 Domain 10 10311 175.6 33 73.13 Changed Dephospho-CoA kinase
Coagulase PF08764 Domain 10 4 266.8 21 48.43 Changed Staphylococcus aureus coagulase
Coagulin PF02035 Domain 2 0 0 0 0 Changed Coagulin
Coatamer_beta_C PF07718 Domain 74 1992 137.1 54 14.87 Changed Coatomer beta C-terminal region
Coatomer_b_Cpla PF14806 Domain 46 2006 123.7 62 13.63 Changed Coatomer beta subunit appendage platform
Coatomer_E PF04733 Repeat 7 2378 232.5 33 83.12 Changed Coatomer epsilon subunit
Coatomer_g_Cpla PF16381 Domain 58 2168 112.2 39 12.94 Changed Coatomer subunit gamma-1 C-terminal appendage platform
Coatomer_WDAD PF04053 Repeat 50 5285 391.7 36 41.33 Changed Coatomer WD associated region
Coat_F PF07875 Domain 197 2142 62.9 24 46.9 Changed Coat F domain
Coat_X PF07552 Domain 31 321 57.7 40 73.87 Changed Spore Coat Protein X and V domain
CoA_binding PF02629 Domain 62 14842 97 34 25.2 Changed CoA binding domain
CoA_binding_2 PF13380 Domain 203 11508 122 26 25.68 Changed CoA binding domain
CoA_binding_3 PF13727 Domain 30 8950 172 15 32.2 Changed CoA-binding domain
CoA_trans PF01144 Domain 38 20925 206.7 27 79.75 Changed Coenzyme A transferase
CoA_transf_3 PF02515 Family 48 29509 335.6 28 84.82 Changed CoA-transferase family III
Cobalamin_bind PF01122 Repeat 42 788 271.9 28 67.63 Changed Eukaryotic cobalamin-binding protein
CobA_CobO_BtuR PF02572 Domain 431 4857 172.7 38 88.89 Changed ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
CobD_Cbib PF03186 Family 467 4898 280.4 32 89.24 Changed CobD/Cbib protein
Cobl PF09469 Domain 3 1383 97.3 53 9 Changed Cordon-bleu ubiquitin-like domain
CobN-Mg_chel PF02514 Family 339 4985 815.7 29 85.57 Changed CobN/Magnesium Chelatase
COBRA PF04833 Family 70 2317 159.8 46 34.31 Changed COBRA-like protein
COBRA1 PF06209 Family 13 799 279.7 46 52.14 Changed Cofactor of BRCA1 (COBRA1)
CobS PF02654 Family 582 4735 232.9 28 91.41 Changed Cobalamin-5-phosphate synthase
CobS_N PF12556 Family 43 1296 33.7 48 10.25 Changed Cobaltochelatase CobS subunit N terminal
CobT PF06213 Family 52 1386 273.1 29 44.46 Changed Cobalamin biosynthesis protein CobT
CobT_C PF11775 Domain 2 1584 202.2 58 33.88 Changed Cobalamin biosynthesis protein CobT VWA domain
CobU PF02283 Domain 112 4935 162.2 33 80.03 Changed Cobinamide kinase / cobinamide phosphate guanyltransferase
cobW PF02492 Domain 39 21054 177.4 27 53.85 Changed CobW/HypB/UreG, nucleotide-binding domain
CobW_C PF07683 Domain 150 11601 99.2 22 25.92 Changed Cobalamin synthesis protein cobW C-terminal domain
Cob_adeno_trans PF01923 Domain 506 6591 163.9 40 81.05 Changed Cobalamin adenosyltransferase
Codanin-1_C PF15296 Family 21 475 114.9 54 9.85 Changed Codanin-1 C-terminus
CODH_A_N PF18537 Domain 41 237 84.6 42 11.96 Changed Carbon monoxide dehydrogenase subunit alpha N-terminal domain
CodY PF06018 Domain 17 1185 174.8 43 67.79 Changed CodY GAF-like domain
COE1_DBD PF16422 Domain 5 3179 186.4 79 38.31 Changed Transcription factor COE1 DNA-binding domain
COE1_HLH PF16423 Domain 6 2744 43.8 93 8.07 Changed Transcription factor COE1 helix-loop-helix domain
COesterase PF00135 Domain 54 38257 405.2 23 79.72 Changed Carboxylesterase family
Cofac_haem_bdg PF04187 Domain 176 1954 200.8 24 51.81 Changed Haem-binding uptake, Tiki superfamily, ChaN
CofC PF01983 Family 3 1178 194.1 28 86.49 Changed Guanylyl transferase CofC like
CofD PF01933 Family 213 5949 309 27 83.81 Changed 2-phospho-L-lactate transferase CofD
CofH_C PF19288 Family 8 4238 123.1 35 24.89 Changed CofH/MqnC C-terminal region
Cofilin_ADF PF00241 Domain 440 13440 120.2 21 47.86 Changed Cofilin/tropomyosin-type actin-binding protein
COG2 PF06148 Family 16 1733 131 32 21.51 Changed COG (conserved oligomeric Golgi) complex component, COG2
COG2_C PF12022 Domain 90 1259 124.9 33 16.96 Changed COG complex component, COG2, C-terminal
COG4 PF08318 Domain 111 2033 289.8 30 38.78 Changed COG4 transport protein
COG5 PF10392 Family 16 1599 126.4 30 18.99 Changed Golgi transport complex subunit 5
COG6 PF06419 Family 100 2147 508.5 31 86.77 Changed Conserved oligomeric complex COG6
COG7 PF10191 Family 4 1593 481.6 23 87.28 Changed Golgi complex component 7 (COG7)
Cohesin PF00963 Domain 50 1760 129.8 16 18.42 Changed Cohesin domain
Cohesin_HEAT PF12765 Repeat 41 2282 39.6 41 2.25 Changed HEAT repeat associated with sister chromatid cohesion
Cohesin_load PF10345 Repeat 49 1909 463.5 29 65.64 Changed Cohesin loading factor
CoiA PF06054 Family 4 1029 235 20 65.21 Changed Competence protein CoiA-like family
Coiled PF05710 Coiled-coil 36 142 82.4 30 89.47 Changed Coiled coil
Coilin_N PF15862 Family 32 716 192.3 24 33.36 Changed Coilin N-terminus
Coleoptericin PF06286 Family 3 92 60.2 77 77.02 Changed Coleoptericin
COLFI PF01410 Family 18 6520 186.8 40 16.65 Changed Fibrillar collagen C-terminal domain
ColG_sub PF18496 Domain 13 54 115.8 44 11.44 Changed Collagenase G catalytic helper subdomain
Colicin PF01024 Domain 1 24 169.3 31 48.4 Changed Colicin pore forming domain
Colicin-DNase PF12639 Domain 18 211 92.9 26 19.64 Changed DNase/tRNase domain of colicin-like bacteriocin
Colicin_D PF11429 Domain 4 83 83.6 30 11.18 Changed Colicin D
Colicin_E5 PF12106 Domain 6 25 80.8 32 7.85 Changed Colicin E5 ribonuclease domain
Colicin_Ia PF11504 Family 3 0 0 0 0 Changed Colicin Ia
Colicin_im PF03857 Family 4 7 120.1 27 78.45 Changed Colicin immunity protein
Colicin_immun PF09204 Domain 6 105 83.2 23 63.52 Changed Bacterial self-protective colicin-like immunity
Colicin_M PF14859 Family 2 15 172.5 27 62.34 Changed Colicin M
Colicin_Pyocin PF01320 Domain 13 122 76.1 31 78.66 Changed Colicin immunity protein / pyocin immunity protein
Colicin_V PF02674 Family 113 6920 145.2 20 63.78 Changed Colicin V production protein
Colipase PF01114 Domain 7 187 39 65 35.04 Changed Colipase, N-terminal domain
Colipase-like PF15083 Family 3 173 75.3 42 71.62 Changed Colipase-like
Colipase_C PF02740 Domain 8 227 43.2 71 41.81 Changed Colipase, C-terminal domain
Collagen PF01391 Repeat 41 158865 62.5 39 28.91 Changed Collagen triple helix repeat (20 copies)
Collagen_bind PF05737 Domain 11 1104 130.2 19 25.51 Changed Collagen binding domain
Collagen_bind_2 PF12904 Domain 36 884 90.6 25 15.53 Changed Putative collagen-binding domain of a collagenase
Collagen_mid PF15984 Domain 20 250 178.1 35 44.78 Changed Bacterial collagen, middle region
Collagen_trimer PF20010 Domain 19 1354 48.3 38 4.23 Changed Collagen trimerization domain
Collar PF07484 Domain 171 2939 56.1 44 22.85 Changed Phage Tail Collar Domain
Collectrin PF16959 Domain 35 705 141 52 27.38 Changed Renal amino acid transporter
Col_cuticle_N PF01484 Family 243 4681 48.9 24 15.71 Changed Nematode cuticle collagen N-terminal domain
ComA PF02679 Family 98 1301 233.9 34 77.26 Changed (2R)-phospho-3-sulfolactate synthase (ComA)
ComC PF03047 Family 5 44 28 33 53.17 Changed COMC family
ComFB PF10719 Family 173 1032 81 26 64.55 Changed Late competence development protein ComFB
ComGF PF15980 Domain 42 540 99.3 18 67.41 Changed Putative Competence protein ComGF
ComGG PF14173 Family 13 169 92.9 18 73.73 Changed ComG operon protein 7
ComJ PF11033 Family 6 62 119.4 28 77.31 Changed Competence protein J (ComJ)
ComK PF06338 Family 18 705 145.5 23 83.95 Changed ComK protein
Comm PF15957 Family 7 118 106.9 32 34.96 Changed Commissureless
COMMD1_N PF17221 Domain 13 392 89.1 63 51.11 Changed COMMD1 N-terminal domain
COMM_domain PF07258 Domain 222 4355 62.8 22 31.47 Changed COMM domain
Como_LCP PF02247 Domain 9 3 377 32 36.17 Changed Large coat protein
Como_SCP PF02248 Domain 8 3 158 31 15.16 Changed Small coat protein
COMP PF11598 Family 8 1429 42.1 52 4.83 Changed Cartilage oligomeric matrix protein
COMPASS-Shg1 PF05205 Family 83 1559 97.6 31 13.11 Changed COMPASS (Complex proteins associated with Set1p) component shg1
Competence PF03772 Family 66 7513 266.9 22 37.88 Changed Competence protein
CompInhib_SCIN PF11546 Family 3 18 112.2 71 95.33 Changed Staphylococcal complement inhibitor SCIN
Complex1_30kDa PF00329 Family 557 8993 123.4 35 43.18 Changed Respiratory-chain NADH dehydrogenase, 30 Kd subunit
Complex1_49kDa PF00346 Family 250 11706 215.4 36 59.1 Changed Respiratory-chain NADH dehydrogenase, 49 Kd subunit
Complex1_51K PF01512 Family 84 13374 165.7 43 33.33 Changed Respiratory-chain NADH dehydrogenase 51 Kd subunit
Complex1_LYR PF05347 Family 168 9799 58.9 23 40.62 Changed Complex 1 protein (LYR family)
Complex1_LYR_1 PF13232 Domain 2 21 88.8 55 35.44 Changed Complex1_LYR-like
Complex1_LYR_2 PF13233 Family 198 2500 92.3 21 64.01 Changed Complex1_LYR-like
ComP_DUS PF16732 Domain 93 1758 93.8 24 64.27 Changed Type IV minor pilin ComP, DNA uptake sequence receptor
ComR_TPR PF18710 Repeat 18 68 194.7 29 74.65 Changed ComR tetratricopeptide
ComS PF17584 Family 1 1 44 100 95.65 Changed Bacillus competence protein S
ComX PF05952 Family 11 49 52.9 28 95.93 Changed Bacillus competence pheromone ComX
ComZ PF10815 Family 8 112 54.8 60 88.23 Changed ComZ
Com_YlbF PF06133 Family 317 2632 105 21 80.78 Changed Control of competence regulator ComK, YlbF/YmcA
Con-6 PF10346 Family 138 1586 33.5 43 52.76 Changed Conidiation protein 6
Condensation PF00668 Family 21 50945 402 19 37.93 Changed Condensation domain
Condensin2nSMC PF12422 Family 40 823 142.9 39 13.8 Changed Condensin II non structural maintenance of chromosomes subunit
Connexin PF00029 Domain 176 7511 203.5 40 67.46 Changed Connexin
Connexin40_C PF16791 Domain 18 372 114.4 44 29.85 Changed Connexin 40 C-terminal domain
Connexin43 PF03508 Family 6 255 76.9 78 20.05 Changed Gap junction alpha-1 protein (Cx43)
Connexin50 PF03509 Family 10 274 66.2 62 15.34 Changed Gap junction alpha-8 protein (Cx50)
Conotoxin PF02950 Domain 98 10 76.9 14 91.55 Changed Conotoxin
Conotoxin_I2 PF17557 Family 31 0 0 0 0 Changed I2-superfamily conotoxins
Consortin_C PF15281 Family 13 414 107.9 53 18.04 Changed Consortin C-terminus
Cons_hypoth698 PF03601 Family 11 4883 299.1 27 85.6 Changed Conserved hypothetical protein 698
Cons_hypoth95 PF03602 Family 21 8635 174.1 31 85.77 Changed Conserved hypothetical protein 95
CooC_C PF15976 Family 12 129 93.5 28 11.62 Changed CS1-pili formation C-terminal
COOH-NH2_lig PF14395 Family 15 234 229.9 37 50.03 Changed Phage phiEco32-like COOH.NH2 ligase-type 2
CooT PF10133 Family 75 324 59.4 32 90.29 Changed CO dehydrogenase accessory protein CooT
COP-gamma_platf PF08752 Domain 125 2362 143.6 46 16.81 Changed Coatomer gamma subunit appendage platform subdomain
COP23 PF14218 Family 91 400 140.8 24 65.02 Changed Circadian oscillating protein COP23
CopB PF05275 Family 89 1248 204.1 40 65.66 Changed Copper resistance protein B precursor (CopB)
CopC PF04234 Domain 304 3973 95.2 29 30.98 Changed CopC domain
CopD PF05425 Family 95 4415 102.7 23 22.31 Changed Copper resistance protein D
CopG_antitoxin PF12441 Domain 13 439 73.6 27 83.99 Changed CopG antitoxin of type II toxin-antitoxin system
COPIIcoated_ERV PF07970 Family 159 5549 193.1 32 50.76 Changed Endoplasmic reticulum vesicle transporter
Copine PF07002 Family 15 9031 197.6 44 39.31 Changed Copine
COPI_assoc PF08507 Family 20 1080 131.1 26 66.29 Changed COPI associated protein
COPI_C PF06957 Repeat 28 2339 363.8 37 33.51 Changed Coatomer (COPI) alpha subunit C-terminus
CopK PF11525 Family 7 79 68.8 48 74.57 Changed Copper resistance protein K
Copper-bind PF00127 Domain 31 4921 101.9 23 38.01 Changed Copper binding proteins, plastocyanin/azurin family
Copper-fist PF00649 Domain 59 1315 38.3 55 8.65 Changed Copper fist DNA binding domain
COPR5 PF15340 Family 6 176 139.6 61 77.62 Changed Cooperator of PRMT5 family
Coprogen_oxidas PF01218 Family 239 5522 284.4 46 87.89 Changed Coproporphyrinogen III oxidase
Coq4 PF05019 Family 105 2431 193.7 32 75.95 Changed Coenzyme Q (ubiquinone) biosynthesis protein Coq4
COQ7 PF03232 Domain 140 3005 160.3 34 74.86 Changed Ubiquinone biosynthesis protein COQ7
COQ9 PF08511 Domain 153 2397 75.1 38 27.56 Changed COQ9
COR PF16095 Family 43 2787 212.8 19 14.02 Changed C-terminal of Roc, COR, domain
Cor1 PF04803 Coiled-coil 38 576 120.8 45 45.56 Changed Cor1/Xlr/Xmr conserved region
CorA PF01544 Family 45 20082 252.1 16 54.96 Changed CorA-like Mg2+ transporter protein
Corazonin PF17308 Family 9 83 72.7 39 54.8 Changed Pro-corazonin
CorC_HlyC PF03471 Domain 122 19019 81.2 23 19.24 Changed Transporter associated domain
Cornichon PF03311 Family 110 3768 107.6 35 76.16 Changed Cornichon protein
Cornifin PF02389 Disordered 3 1475 104 20 36.97 Changed Cornifin (SPRR) family
Corona_3 PF04694 Family 1 6 59 83 82.33 Changed Coronavirus ORF3 protein
Corona_5a PF06336 Family 1 5 64 57 98.16 Changed Coronavirus 5a protein
Corona_6B_7B PF03262 Family 1 7 205.6 56 99.72 Changed Coronavirus 6B/7B protein
Corona_7 PF02398 Family 1 8 85.5 71 100.44 Changed Coronavirus protein 7
Corona_I PF03187 Family 1 7 193.9 46 97.07 Changed Corona nucleocapsid I protein
Corona_NS1 PF06145 Family 2 2 29 100 67.44 Changed Coronavirus nonstructural protein NS1
Corona_NS12-7 PF04753 Family 5 11 107.6 61 99.16 Changed Coronavirus non-structural protein NS12.7 family
Corona_NS2A PF05213 Family 2 18 210.1 40 10 Changed Coronavirus NS2A protein
Corona_NS3b PF03053 Family 4 26 208.2 35 98.45 Changed ORF3b coronavirus protein
Corona_NS4 PF03905 Family 3 8 52.5 64 48.22 Changed Coronavirus non-structural protein NS4
CortBP2 PF09727 Family 33 2330 141.3 38 17.51 Changed Cortactin-binding protein-2
Cortex-I_coil PF09304 Coiled-coil 3 12 103.6 49 20.58 Changed Cortexillin I, coiled coil
Cortexin PF11057 Family 6 932 70.6 48 81.08 Changed Cortexin of kidney
COS PF18568 Domain 5 2018 50.8 53 7.57 Changed TRIM C-terminal subgroup One Signature domain
Costars PF14705 Domain 60 1343 75.7 47 36.85 Changed Costars
CotE PF10628 Family 19 521 173.3 46 94.7 Changed Outer spore coat protein E (CotE)
CotH PF08757 Family 32 3477 312.2 15 48.96 Changed CotH kinase protein
CotJA PF11007 Family 150 904 35.4 39 42.14 Changed Spore coat associated protein JA (CotJA)
CotJB PF12652 Domain 190 1022 76.7 38 80.08 Changed CotJB protein
Couple_hipA PF13657 Domain 90 3854 103 22 27.29 Changed HipA N-terminal domain
CoV_E PF02723 Family 21 63 76.6 31 97.44 Changed Coronavirus small envelope protein E
CoV_ExoN PF06471 Family 6 78 516.8 57 8.15 Changed Coronavirus proofreading exoribonuclease
CoV_M PF01635 Family 17 81 204.6 39 89.5 Changed Coronavirus M matrix/glycoprotein
CoV_Methyltr_2 PF06460 Domain 5 86 288.1 51 4.56 Changed Coronavirus 2'-O-methyltransferase
CoV_NSP10 PF09401 Family 6 115 122.2 59 2.12 Changed Coronavirus RNA synthesis protein NSP10
CoV_NSP15_C PF19215 Domain 18 105 146 39 2.48 Changed Coronavirus replicase NSP15, uridylate-specific endoribonuclease
CoV_NSP15_M PF19216 Domain 19 78 118.5 39 1.87 Changed Coronavirus replicase NSP15, middle domain
CoV_NSP15_N PF19219 Domain 19 78 61 57 0.96 Changed Coronavirus replicase NSP15, N-terminal oligomerisation
CoV_NSP2_C PF19212 Family 43 139 161 20 3.98 Changed Coronavirus replicase NSP2, C-terminal
CoV_NSP2_N PF19211 Family 20 82 217.5 33 3.73 Changed Coronavirus replicase NSP2, N-terminal
CoV_NSP3_C PF19218 Family 21 115 471.7 33 8.15 Changed Coronavirus replicase NSP3, C-terminal
CoV_NSP4_C PF16348 Domain 5 115 95.9 48 1.66 Changed Coronavirus replicase NSP4, C-terminal
CoV_NSP4_N PF19217 Family 22 115 354.2 34 6.12 Changed Coronavirus replicase NSP4, N-terminal
CoV_NSP6 PF19213 Family 21 116 260.8 32 4.55 Changed Coronavirus replicase NSP6
CoV_NSP7 PF08716 Domain 5 109 83.9 51 1.46 Changed Coronavirus replicase NSP7
CoV_NSP8 PF08717 Domain 5 115 195.7 47 3.38 Changed Coronavirus replicase NSP8
CoV_NSP9 PF08710 Domain 5 115 110.3 48 1.91 Changed Coronavirus replicase NSP9
CoV_nucleocap PF00937 Family 25 88 321.7 30 86.2 Changed Coronavirus nucleocapsid
CoV_peptidase PF08715 Family 3 157 286.3 23 6.76 Changed Coronavirus papain-like peptidase
CoV_RPol_N PF06478 Family 6 78 348.2 58 5.49 Changed Coronavirus RNA-dependent RNA polymerase, N-terminal
CoV_S1 PF01600 Family 20 34 401.1 31 29.97 Changed Coronavirus spike glycoprotein S1
CoV_S1_C PF19209 Domain 28 72 58.5 36 4.48 Changed Coronavirus spike glycoprotein S1, C-terminal
CoV_S2 PF01601 Family 37 86 529.7 39 41.45 Changed Coronavirus spike glycoprotein S2
CoV_S2_C PF19214 Domain 31 63 40.6 35 3.11 Changed Coronavirus spike glycoprotein S2, intravirion
CowN PF20543 Family 93 138 94.3 35 95.26 New N2-fixation sustaining protein CowN
COX1 PF00115 Family 619 16920 425 31 74.8 Changed Cytochrome C and Quinol oxidase polypeptide I
COX14 PF14880 Family 34 845 57.4 24 30.42 Changed Cytochrome oxidase c assembly
COX15-CtaA PF02628 Family 55 8141 261.7 24 80.12 Changed Cytochrome oxidase assembly protein
COX16 PF14138 Family 92 1434 78.5 34 52.5 Changed Cytochrome c oxidase assembly protein COX16
COX17 PF05051 Family 91 1429 46.7 50 50.79 Changed Cytochrome C oxidase copper chaperone (COX17)
COX2 PF00116 Domain 11 9671 102.4 31 32.89 Changed Cytochrome C oxidase subunit II, periplasmic domain
COX2-transmemb PF09125 Domain 1 7 36.9 48 23.31 Changed Cytochrome C oxidase subunit II, transmembrane
Cox20 PF12597 Family 53 1163 96.9 29 61.14 Changed Cytochrome c oxidase assembly protein COX20
COX24_C PF08213 Domain 40 2219 32 53 19.4 Changed Mitochondrial mRNA-processing protein COX24, C-terminal
COX2_TM PF02790 Family 11 5240 85.6 24 25.93 Changed Cytochrome C oxidase subunit II, transmembrane domain
COX3 PF00510 Family 8 11066 190.3 27 84.78 Changed Cytochrome c oxidase subunit III
COX4 PF02936 Family 89 1824 128.9 31 69.1 Changed Cytochrome c oxidase subunit IV
COX4_pro PF03626 Family 331 4163 74.9 22 65.68 Changed Prokaryotic Cytochrome C oxidase subunit IV
COX4_pro_2 PF07835 Domain 30 929 41.4 30 71.12 Changed Bacterial aa3 type cytochrome c oxidase subunit IV
COX5A PF02284 Domain 48 1572 97.5 53 62.64 Changed Cytochrome c oxidase subunit Va
COX5B PF01215 Domain 22 1935 116.7 35 65.22 Changed Cytochrome c oxidase subunit Vb
COX6A PF02046 Family 45 1683 98.1 34 75.79 Changed Cytochrome c oxidase subunit VIa
COX6B PF02297 Domain 57 3590 66.6 31 54.45 Changed Cytochrome oxidase c subunit VIb
COX6C PF02937 Family 42 612 67.5 42 59.99 Changed Cytochrome c oxidase subunit VIc
COX7a PF02238 Family 79 1897 52 29 52.92 Changed Cytochrome c oxidase subunit VII
COX7B PF05392 Family 15 416 74.7 57 92.94 Changed Cytochrome C oxidase chain VIIB
COX7C PF02935 Family 73 1273 63.9 34 63.73 Changed Cytochrome c oxidase subunit VIIc
COX8 PF02285 Family 31 534 42.1 38 50.97 Changed Cytochrome oxidase c subunit VIII
COXG PF06240 Family 11 3176 140.4 26 58.68 Changed Carbon monoxide dehydrogenase subunit G (CoxG)
CoxIIa PF08113 Family 4 120 31.5 46 66.75 Changed Cytochrome c oxidase subunit IIa family
COX_ARM PF06481 Motif 103 1342 45.7 33 13.6 Changed COX Aromatic Rich Motif
Co_AT_N PF12557 Family 76 1055 25.6 37 12.43 Changed Cob(I)alamin adenosyltransferase N terminal
CO_deh_flav_C PF03450 Domain 93 13182 101.9 24 15.79 Changed CO dehydrogenase flavoprotein C-terminal domain
CO_dh PF02552 Family 6 146 159.2 25 70.83 Changed CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit
CP12 PF02672 Family 89 1117 63.3 37 36.3 Changed CP12 domain
CP2 PF04516 Family 11 4484 204.2 39 36.35 Changed CP2 transcription factor
CpcD PF01383 Domain 106 821 54.1 35 23.99 Changed CpcD/allophycocyanin linker domain
CPCFC PF17223 Family 19 195 16.9 67 25.34 Changed Cuticle protein CPCFC
CPDase PF07823 Domain 7 604 178.7 21 80.09 Changed Cyclic phosphodiesterase-like protein
CpeS PF09367 Domain 42 573 161.3 31 88.08 Changed CpeS-like protein
CpeT PF06206 Domain 65 829 165.2 30 74.52 Changed CpeT/CpcT family (DUF1001)
CPG4 PF15481 Family 9 179 91.1 22 25.41 Changed Chondroitin proteoglycan 4
CpG_bind_C PF12269 Domain 22 901 209.2 57 39.56 Changed CpG binding protein C-terminal domain
CPL PF08144 Repeat 57 1648 136.4 27 20.89 Changed CPL (NUC119) domain
cPLA2_C2 PF18695 Domain 74 940 104.4 28 13.33 Changed Cytosolic phospholipases A2 C2-domain
Cpn10 PF00166 Domain 37 13521 91.2 42 84.83 Changed Chaperonin 10 Kd subunit
Cpn60_TCP1 PF00118 Family 52 39336 426.7 26 69.93 Changed TCP-1/cpn60 chaperonin family
CPP1-like PF11833 Family 72 1206 168.7 30 61.95 Changed Protein CHAPERONE-LIKE PROTEIN OF POR1-like
CppA_C PF14507 Family 8 84 105.2 28 41.68 Changed CppA C-terminal
CppA_N PF14506 Family 4 64 118.4 37 47.74 Changed CppA N-terminal
CPSase_L_D2 PF02786 Domain 16 54254 201.3 32 26.57 Changed Carbamoyl-phosphate synthase L chain, ATP binding domain
CPSase_L_D3 PF02787 Domain 923 11547 80.7 34 6.56 Changed Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CPSase_sm_chain PF00988 Domain 617 11317 127.8 46 19.05 Changed Carbamoyl-phosphate synthase small chain, CPSase domain
CpsB_CapC PF19567 Domain 45 2209 223.3 28 90.27 Changed Capsular polysaccharide synthesis, CpsB/CapC
CPSF100_C PF13299 Family 92 1665 144.5 30 17.43 Changed Cleavage and polyadenylation factor 2 C-terminal
CPSF73-100_C PF11718 Domain 145 1971 220.8 30 31.25 Changed Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
CPSF_A PF03178 Repeat 62 6413 295.9 24 25.91 Changed CPSF A subunit region
CPT PF07931 Domain 6 842 164.4 29 87.14 Changed Chloramphenicol phosphotransferase-like protein
Cpta_toxin PF07254 Family 77 622 131.2 19 92.3 Changed Membrane-bound toxin component of toxin-antitoxin system
CPT_N PF16484 Domain 23 2013 46.9 68 6.27 Changed Carnitine O-palmitoyltransferase N-terminus
CPV_Polyhedrin PF17515 Family 5 4 241.2 19 90.87 Changed Cypovirus polyhedrin
CPW_WPC PF09717 Domain 120 1113 60.4 28 49.62 Changed Plasmodium falciparum domain of unknown function (CPW_WPC)
CpxA_peri PF16527 Domain 7 194 110.7 39 24.91 Changed Two-component sensor protein CpxA, periplasmic domain
CpXC PF14353 Family 40 300 123.4 22 45.05 Changed CpXC protein
CPxCG_zf PF19769 Family 65 190 186 39 89.1 Changed CPxCG-related zinc finger
cpYpsA PF12694 Family 33 307 140.6 38 61.75 Changed Circularly permutated YpsA SLOG family
CP_ATPgrasp_1 PF04174 Family 8 200 287.9 51 56.97 Changed A circularly permuted ATPgrasp
CP_ATPgrasp_2 PF14403 Family 294 4502 372.1 42 61.93 Changed Circularly permuted ATP-grasp type 2
CR6_interact PF10147 Family 7 448 191.1 30 79.34 Changed Growth arrest and DNA-damage-inducible proteins-interacting protein 1
CRA PF06589 Family 6 44 113.9 33 67.49 Changed Circumsporozoite-related antigen (CRA)
CRAL_TRIO PF00650 Domain 92 24112 149.1 21 33.35 Changed CRAL/TRIO domain
CRAL_TRIO_2 PF13716 Domain 54 10301 133.7 23 11.37 Changed Divergent CRAL/TRIO domain
CRAL_TRIO_N PF03765 Domain 236 11187 62.1 24 13.76 Changed CRAL/TRIO, N-terminal domain
CRAM_rpt PF07016 Repeat 2 84 21.9 89 79.31 Changed Cysteine-rich acidic integral membrane protein precursor
CRA_rpt PF07046 Coiled-coil 4 98 40.4 79 60.4 Changed Cytoplasmic repetitive antigen (CRA) like repeat
CRCB PF02537 Family 811 11326 115.4 29 75.62 Changed CrcB-like protein, Camphor Resistance (CrcB)
CRC_subunit PF08624 Family 65 1285 131.7 52 22.12 Changed Chromatin remodelling complex Rsc7/Swp82 subunit
CreA PF05981 Family 67 1388 127.4 44 77.51 Changed CreA protein
Creatinase_N PF01321 Domain 82 16139 135.9 18 28.94 Changed Creatinase/Prolidase N-terminal domain
Creatinase_N_2 PF16189 Domain 554 5935 163.5 30 25.92 Changed Creatinase/Prolidase N-terminal domain
Creatininase PF02633 Family 381 4769 231.7 25 90.23 Changed Creatinine amidohydrolase
Creb_binding PF09030 Domain 15 1513 113.4 48 4.84 Changed Creb binding
cREC_REC PF20274 Domain 189 530 91 29 75.03 New Cyclic-phosphate processing Receiver domain
CreD PF06123 Family 68 962 408.8 31 93.36 Changed Inner membrane protein CreD
Cren7 PF11520 Family 8 41 56.8 56 92.64 Changed Chromatin protein Cren7
CREPT PF16566 Domain 24 1169 132.7 49 33.26 Changed Cell-cycle alteration and expression-elevated protein in tumour
CReP_N PF10472 Domain 11 155 312.6 48 48.88 Changed eIF2-alpha phosphatase phosphorylation constitutive repressor
Crescentin PF19220 Coiled-coil 13 34 388.7 34 81.36 Changed Crescentin protein
CRF PF00473 Family 27 935 38.1 42 21.38 Changed Corticotropin-releasing factor family
CRF-BP PF05428 Family 16 525 267 46 87.71 Changed Corticotropin-releasing factor binding protein (CRF-BP)
CRF1 PF10380 Family 13 91 122.9 36 14.99 Changed Transcription factor CRF1
CrgA PF06781 Family 69 1536 86 37 92.91 Changed Cell division protein CrgA
CRIC_ras_sig PF10534 Domain 32 2048 90.7 55 11.05 Changed Connector enhancer of kinase suppressor of ras
CRIM PF16978 Family 93 1651 141.6 37 21.13 Changed SAPK-interacting protein 1 (Sin1), middle CRIM domain
CRIM1_C PF19442 Domain 8 441 121.6 56 13.21 Changed Cysteine-rich motor neuron 1 protein C-terminal
Crinivirus_P26 PF07416 Family 1 1 227 100 100 Changed Crinivirus P26 protein
Crinkler PF20147 Domain 189 3078 103.3 21 28.55 Changed Crinkler effector protein N-terminal domain
Cript PF10235 Family 42 1125 89.2 46 75.16 Changed Microtubule-associated protein CRIPT
Crisp PF08562 Domain 65 719 55.5 47 22.07 Changed Crisp
CRISPR_assoc PF08798 Domain 89 1020 215.7 25 96.82 Changed CRISPR associated protein
CRISPR_Cas2 PF09827 Family 348 3652 76.3 25 77.79 Changed CRISPR associated protein Cas2
CRISPR_Cas6 PF10040 Family 180 894 120.8 19 41.04 Changed CRISPR-associated endoribonuclease Cas6
CRISPR_Cas6_N PF19308 Domain 37 183 130.9 32 42.45 Changed CRISPR Cas6 N-terminal domain
CRISPR_Cas9_WED PF18061 Domain 7 63 133.4 37 13.39 Changed CRISPR-Cas9 WED domain
CRISPR_Cse1 PF09481 Family 82 881 457.4 20 83.19 Changed CRISPR-associated protein Cse1 (CRISPR_cse1)
CRISPR_Cse2 PF09485 Family 74 885 148.2 22 72.68 Changed CRISPR-associated protein Cse2 (CRISPR_cse2)
Crl PF07417 Domain 119 202 124.8 46 95.26 Changed Sigma factor-binding transcriptional regulator Crl
CRM1_C PF08767 Repeat 25 2636 291.9 43 29.76 Changed CRM1 C terminal
CRM1_repeat PF18777 Repeat 90 2140 36.8 56 3.52 Changed Chromosome region maintenance or exportin repeat
CRM1_repeat_2 PF18784 Repeat 68 2252 67.5 63 6.48 Changed CRM1 / Exportin repeat 2
CRM1_repeat_3 PF18787 Repeat 47 2269 50.5 76 4.87 Changed CRM1 / Exportin repeat 3
Cro PF09048 Domain 4 72 58.6 51 88.14 Changed Cro
Croc_4 PF17691 Family 3 5 119 70 55.19 Changed Contingent replication of cDNA 4
Crp PF00325 Domain 9 551 30.6 42 13.13 Changed Bacterial regulatory proteins, crp family
CRPA PF05745 Family 5 5 94.4 34 50.54 Changed Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA)
CRPV_capsid PF08762 Domain 7 204 216.4 15 14.96 Changed CRPV capsid protein like
Crr6 PF08847 Domain 42 339 148.5 54 72.07 Changed Chlororespiratory reduction 6
CRR7 PF12095 Family 53 310 83.2 46 62.81 Changed Protein CHLORORESPIRATORY REDUCTION 7
CRS1_YhbY PF01985 Domain 481 9552 84.3 25 36.73 Changed CRS1 / YhbY (CRM) domain
CRT-like PF08627 Family 10 1024 261.8 31 68.76 Changed CRT-like, chloroquine-resistance transporter-like
CRT10 PF08728 Family 7 530 292.7 16 46.02 Changed CRT10
CrtC PF07143 Domain 120 1375 169.8 29 44.14 Changed CrtC N-terminal lipocalin domain
CrtO PF18927 Domain 46 346 119 22 69.04 Changed Glycosyl-4,4'-diaponeurosporenoate acyltransferase
Crust_neurohorm PF01147 Family 11 384 63.7 35 45.53 Changed Crustacean CHH/MIH/GIH neurohormone family
Crust_neuro_H PF03858 Family 8 1 36 100 25.53 Changed Crustacean neurohormone H
Cry1Ac_D5 PF17997 Domain 1 2 164 42 23.5 Changed Insecticidal delta-endotoxin CryIA(c) domain 5
CryBP1 PF07029 Family 2 6 160.7 27 64.05 Changed CryBP1 protein
Cryptochrome_C PF12546 Family 15 349 116.6 45 18.27 Changed Blue/Ultraviolet sensing protein C terminal
Crystall PF00030 Domain 86 19766 81.3 31 45.62 Changed Beta/Gamma crystallin
Crystallin PF00525 Family 9 858 53.1 46 29.41 Changed Alpha crystallin A chain, N terminal
Crystall_2 PF09076 Domain 6 121 68.3 32 58.33 Changed Beta/Gamma crystallin
Crystall_3 PF08964 Domain 10 97 83.6 24 33.1 Changed Beta/Gamma crystallin
Crystall_4 PF17945 Domain 10 52 89 54 29.86 Changed Beta/Gamma crystallin
CS PF04969 Domain 69 13260 77.7 20 20.35 Changed CS domain
Csa1 PF06023 Family 7 69 258.4 29 98.58 Changed CRISPR-associated exonuclease Csa1
CsbD PF05532 Domain 77 6178 52.8 32 72.21 Changed CsbD-like
Csc2 PF18320 Family 18 165 288.6 32 88.48 Changed Csc2 Crispr
CSD PF00313 Domain 34 36091 65.3 39 54.3 Changed 'Cold-shock' DNA-binding domain
CSD2 PF17876 Domain 546 5752 74.4 29 9.77 Changed Cold shock domain
Csd3_N PF18059 Domain 8 77 83.6 42 20.58 Changed Csd3 N-terminal
Csd3_N2 PF19425 Domain 14 2190 125 30 27.75 Changed Csd3 second domain
Cse1 PF08506 Repeat 13 4207 287.3 24 31.22 Changed Cse1
CSF-1 PF05337 Domain 5 400 137 43 32.67 Changed Macrophage colony stimulating factor-1 (CSF-1)
CSG2 PF16965 Family 12 153 304.6 35 66.2 Changed Ceramide synthase regulator
CsgA PF17334 Family 17 101 82.4 48 98.3 Changed Minor curli fiber component A
CsgE PF10627 Family 17 315 100.9 25 57.55 Changed Curli assembly protein CsgE
CsgF PF10614 Family 9 433 123.8 32 90.87 Changed Type VIII secretion system (T8SS), CsgF protein
CsgG PF03783 Family 15 1852 182.9 19 55.89 Changed Curli production assembly/transport component CsgG
CshA_NR2 PF18651 Domain 35 144 285.6 20 24.34 Changed Surface adhesin CshA non-repetitive domain 2
CshA_repeat PF19076 Domain 36 1241 105.2 28 28.53 Changed Surface adhesin CshA repetitive domain
CsiD PF08943 Domain 10 154 284.8 51 91.12 Changed CsiD
CsiV PF10972 Family 17 480 258 21 91.5 Changed Peptidoglycan-binding protein, CsiV
Csm1 PF12539 Family 66 606 89.9 42 18.97 Changed Chromosome segregation protein Csm1/Pcs1
Csm1_B PF18211 Domain 60 289 92.7 30 12.04 Changed Csm1 subunit domain B
Csm1_N PF18504 Coiled-coil 13 30 69.7 37 34.28 Changed Csm1 N-terminal domain
CSM2 PF16834 Domain 11 28 186.5 29 92.12 Changed Shu complex component Csm2, DNA-binding
Csm2_III-A PF03750 Family 23 298 116.9 22 79.56 Changed Csm2 Type III-A
Csm4_C PF17953 Domain 44 176 91.8 28 27.58 Changed CRISPR Csm4 C-terminal domain
CSN4_RPN5_eIF3a PF18420 Domain 3 495 41.4 74 10.45 Changed CSN4/RPN5/eIF3a helix turn helix domain
CSN5_C PF18323 Domain 129 1540 80.9 42 22.35 Changed Cop9 signalosome subunit 5 C-terminal domain
CSN7a_helixI PF18392 Domain 14 849 49.7 57 18.6 Changed COP9 signalosome complex subunit 7a helix I domain
CSN8_PSD8_EIF3K PF10075 Family 32 4656 137.3 21 53.03 Changed CSN8/PSMD8/EIF3K family
CsoS2_M PF12288 Family 10 181 281.1 29 62 Changed Carboxysome shell peptide mid-region
CsoSCA PF08936 Domain 21 142 379.3 37 79.92 Changed Carboxysome Shell Carbonic Anhydrase
CspB_prodomain PF18425 Domain 93 273 84.9 34 12.79 Changed Csp protease B prodomain
CsrA PF02599 Family 244 3630 52.7 46 68.23 Changed Global regulator protein family
CSRNP_N PF16019 Family 27 1436 194.6 54 35.94 Changed Cysteine/serine-rich nuclear protein N-terminus
CSS-motif PF12792 Domain 58 751 189.7 14 37.41 Changed CSS motif domain associated with EAL
CssAB PF16831 Domain 1 0 0 0 0 Changed CS6 fimbrial subunits A and B, Coli surface antigen 6
CST-I PF06002 Family 2 29 242.2 34 82.23 Changed Alpha-2,3-sialyltransferase (CST-I)
CstA PF02554 Family 43 5062 283.3 32 60.02 Changed Carbon starvation protein CstA
CstA_5TM PF13722 Domain 186 3981 122.6 32 20.54 Changed 5TM C-terminal transporter carbon starvation CstA
CSTF1_dimer PF16699 Domain 21 559 55.9 52 13 Changed Cleavage stimulation factor subunit 1, dimerisation domain
CSTF2_hinge PF14327 Family 92 2470 77.1 37 18.3 Changed Hinge domain of cleavage stimulation factor subunit 2
CSTF_C PF14304 Domain 14 2131 39.5 46 9.37 Changed Transcription termination and cleavage factor C-terminal
CT47 PF15623 Family 8 117 207.7 35 84.26 Changed Cancer/testis gene family 47
CtaG_Cox11 PF04442 Family 188 3801 145.2 43 63.11 Changed Cytochrome c oxidase assembly protein CtaG/Cox11
CTC1 PF15489 Family 11 569 633.2 28 84.09 Changed CST, telomere maintenance, complex subunit CTC1
CTC1_2 PF15491 Family 6 261 270.4 42 24.9 Changed CST, telomere maintenance, complex subunit CTC1
CTD PF12815 Repeat 26 1042 83.2 37 11.25 Changed Spt5 C-terminal nonapeptide repeat binding Spt4
CTD1 PF20276 Domain 35 51 245.2 16 54.5 New C-terminal domain 1 of the ABC-three component (ABC-3C) systems
CTD10 PF20275 Domain 19 239 128.3 18 33.98 New C-terminal domain 10 of the ABC-three component (ABC-3C) systems
CTD11 PF20277 Domain 10 80 135.1 26 41.04 New C-terminal domain 11 of the ABC-three component (ABC-3C) systems
CTD12 PF20279 Domain 5 61 138.4 36 50.35 New C-terminal domain 12 of the ABC-three component (ABC-3C) systems
CTD2 PF20278 Domain 17 23 327.9 21 46.08 New C-terminal domain 2 of the ABC-three component (ABC-3C) systems
CTD3 PF20395 Domain 15 1 162 100 34.39 New C-terminal domain 3 of the ABC-three component (ABC-3C) systems
CTD4 PF20280 Domain 17 27 217.4 20 50.12 New C-terminal domain 4 of the ABC-three component (ABC-3C) systems
CTD5 PF20281 Domain 5 7 187.6 28 44.25 New C-terminal domain 5 of the ABC-three component (ABC-3C) systems
CTD6 PF20282 Domain 32 185 129.5 32 38.36 New C-terminal domain 6 of the ABC-three component (ABC-3C) systems
CTD7 PF20283 Domain 14 194 125.4 28 32.23 New C-terminal domain 7 of the ABC-three component (ABC-3C) systems
CTD8 PF20284 Domain 3 13 124.6 35 37.69 New C-terminal domain 8 of the ABC-three component (ABC-3C) systems
CTD9 PF20285 Domain 47 73 113.3 31 49.41 New C-terminal domain 9 of the ABC-three component (ABC-3C) systems
Ctf8 PF09696 Family 62 1332 102.8 28 62.51 Changed Ctf8
CTF_NFI PF00859 Family 11 4208 228.3 48 53.73 Changed CTF/NF-I family transcription modulation region
Cthe_2159 PF14262 Repeat 51 1502 217.2 24 58.98 Changed Carbohydrate-binding domain-containing protein Cthe_2159
CTI PF06934 Family 37 319 637 39 87.9 Changed Fatty acid cis/trans isomerase (CTI)
CtIP_N PF10482 Coiled-coil 18 629 110 61 15.84 Changed Tumour-suppressor protein CtIP N-terminal domain
CTK3 PF12243 Repeat 7 748 122.1 44 39.05 Changed CTD kinase subunit gamma CTK3
CTK3_C PF12350 Domain 61 739 72.5 43 23.78 Changed CTD kinase subunit gamma CTK3 C-terminus
CTLH PF10607 Domain 115 8523 173.3 22 39.78 Changed CTLH/CRA C-terminal to LisH motif domain
CtnDOT_TraJ PF07863 Family 10 491 63.2 42 18.23 Changed Homologues of TraJ from Bacteroides conjugative transposon
CTNNB1_binding PF08347 Family 18 3887 191.9 54 42.1 Changed N-terminal CTNNB1 binding
CTNNBL PF08216 Repeat 84 2019 403.8 38 79.13 Changed Catenin-beta-like, Arm-motif containing nuclear
CTP-dep_RFKase PF01982 Family 87 311 121.9 39 57.64 Changed Domain of unknown function DUF120
CTP_synth_N PF06418 Domain 380 11706 252.3 55 47.17 Changed CTP synthase N-terminus
CTP_transf_1 PF01148 Family 34 12518 268.7 24 83.74 Changed Cytidylyltransferase family
CTP_transf_3 PF02348 Family 13 8989 212.4 24 76.98 Changed Cytidylyltransferase
CTP_transf_like PF01467 Domain 65 34489 143.7 19 56.63 Changed Cytidylyltransferase-like
Ctr PF04145 Family 411 6336 114.3 22 63.25 Changed Ctr copper transporter family
CtsR PF05848 Domain 89 1129 71.3 60 45.99 Changed CtsR N-terminal HTH domain
CtsR_C PF17727 Domain 108 1076 71.8 30 46.63 Changed CtsR C-terminal dimerization domain
CttA_N PF18244 Domain 4 10 66.2 30 13.76 Changed Cellulose-binding protein CttA N-terminal domain
CTU2 PF10288 Family 101 1358 103.4 25 22.95 Changed Cytoplasmic tRNA 2-thiolation protein 2
CTV_P13 PF06922 Family 3 1 119 100 100 Changed Citrus tristeza virus P13 protein
CTV_P23 PF04808 Family 3 2 155 22 90.38 Changed Citrus tristeza virus (CTV) P23 protein
CTV_P33 PF07184 Family 2 1 302 100 100 Changed Citrus tristeza virus P33 protein
CTV_P6 PF06706 Family 2 1 51 100 100 Changed Citrus tristeza virus 6-kDa protein
CTXphi_pIII-N1 PF16710 Domain 1 3 111 99 27.36 Changed N-terminal N1 domain of Vibrio phage CTXphi pIII
CTX_RstB PF07459 Family 7 35 88.6 26 74.77 Changed CTX phage RstB protein
CT_A_B PF02626 Family 534 6055 261.1 33 46.26 Changed Carboxyltransferase domain, subdomain A and B
CT_C_D PF02682 Family 81 5944 205.9 29 39.53 Changed Carboxyltransferase domain, subdomain C and D
Cu PF17563 Family 3 0 0 0 0 Changed Cupiennin
Cu-binding_MopE PF11617 Repeat 45 2396 24.6 40 8.98 Changed Putative metal-binding motif
Cu-oxidase PF00394 Domain 72 22029 150.2 21 25.97 Changed Multicopper oxidase
Cu-oxidase_2 PF07731 Domain 127 28607 132.5 22 22.55 Changed Multicopper oxidase
Cu-oxidase_3 PF07732 Domain 81 31736 112.2 26 20.11 Changed Multicopper oxidase
Cu-oxidase_4 PF02578 Family 580 6621 226 32 86.56 Changed Multi-copper polyphenol oxidoreductase laccase
Cu2_monooxygen PF01082 Domain 115 2870 119.8 33 18.04 Changed Copper type II ascorbate-dependent monooxygenase, N-terminal domain
Cu2_monoox_C PF03712 Domain 51 3275 141.9 29 22.56 Changed Copper type II ascorbate-dependent monooxygenase, C-terminal domain
CUB PF00431 Domain 24 79550 107.6 26 30.16 Changed CUB domain
CUB_2 PF02408 Domain 24 418 113.6 19 25.43 Changed CUB-like domain
Cucumopine_C PF18631 Domain 12 154 141 29 49.15 Changed Cucumopine synthase C-terminal helical bundle domain
Cucumo_2B PF03263 Family 1 5 101.2 41 94.58 Changed Cucumovirus protein 2B
Cucumo_coat PF00760 Domain 2 248 96.3 27 15.48 Changed Cucumovirus coat protein
CUE PF02845 Domain 114 8792 41 24 7.22 Changed CUE domain
Cue1_U7BR PF18499 Domain 15 27 52 48 26.03 Changed Ubc7p-binding region of Cue1
Cul7 PF11515 Family 13 1160 75.5 57 2.4 Changed Mouse development and cellular proliferation protein Cullin-7
Cullin PF00888 Repeat 341 14015 468 23 64.69 Changed Cullin family
Cullin_binding PF03556 Family 182 4835 110.5 39 40.94 Changed Cullin binding
Cullin_Nedd8 PF10557 Domain 331 8952 62.1 48 7.68 Changed Cullin protein neddylation domain
CUPID PF11819 Domain 21 2368 129 49 15.45 Changed Cytohesin Ubiquitin Protein Inducing Domain
Cupin_1 PF00190 Domain 63 22409 131.3 19 61.99 Changed Cupin
Cupin_2 PF07883 Domain 156 0 0 0 0 Changed Cupin domain
Cupin_3 PF05899 Domain 24 6668 73 20 46.17 Changed EutQ-like cupin domain
Cupin_5 PF06172 Domain 267 3293 138.4 37 79.5 Changed Cupin superfamily (DUF985)
Cupin_6 PF12852 Domain 80 4308 177 22 57.8 Changed Cupin
Cupin_7 PF12973 Domain 31 3873 89.5 25 54.01 Changed ChrR Cupin-like domain
Cupin_8 PF13621 Domain 42 10916 237.9 19 52.17 Changed Cupin-like domain
Cupredoxin_1 PF13473 Domain 59 4480 109 18 38.24 Changed Cupredoxin-like domain
Curlin_rpt PF07012 Repeat 87 2579 33.8 34 27.87 Changed Curlin associated repeat
Curto_V2 PF07325 Family 2 8 121.5 60 99.9 Changed Curtovirus V2 protein
Curto_V3 PF07436 Family 2 8 86.5 62 97.6 Changed Curtovirus V3 protein
CusB_dom_1 PF00529 Family 43 4891 322.5 12 82.93 Changed Cation efflux system protein CusB domain 1
CusF_Ec PF11604 Family 181 2096 66.2 31 26.71 Changed Copper binding periplasmic protein CusF
CUT PF02376 Domain 37 6674 77.8 39 17.41 Changed CUT domain
Cut12 PF11500 Domain 34 405 146.5 34 20.87 Changed Cut12 conserved domain
Cut8 PF08559 Family 81 909 232 27 65.24 Changed Cut8, nuclear proteasome tether protein
CutA1 PF03091 Domain 412 3845 95.5 34 74.4 Changed CutA1 divalent ion tolerance protein
CutC PF03932 Domain 6 3971 194.8 35 80.3 Changed CutC family
Cuticle_1 PF08140 Family 38 35 40.3 44 36.19 Changed Crustacean cuticle protein repeat
Cuticle_2 PF08184 Family 3 0 0 0 0 Changed Cuticle protein 7 isoform family
Cuticle_3 PF11018 Family 6 325 115.5 29 55.54 Changed Pupal cuticle protein C1
Cuticle_4 PF15955 Family 27 213 84.6 40 57.03 Changed Cuticle protein
Cutinase PF01083 Domain 15 4845 183.4 24 65.27 Changed Cutinase
CUTL PF16557 Domain 4 1020 70.1 85 9.62 Changed CUT1-like DNA-binding domain of SATB
Cu_amine_oxid PF01179 Domain 299 7217 355.5 32 57.09 Changed Copper amine oxidase, enzyme domain
Cu_amine_oxidN1 PF07833 Domain 113 9999 86.2 20 23.8 Changed Copper amine oxidase N-terminal domain
Cu_amine_oxidN2 PF02727 Domain 9 4508 88.2 24 12.73 Changed Copper amine oxidase, N2 domain
Cu_amine_oxidN3 PF02728 Domain 11 4355 99.9 23 14.5 Changed Copper amine oxidase, N3 domain
Cu_bind_CorA PF18252 Domain 1 11 166.6 39 77.02 Changed Copper(I)-binding protein CorA
Cu_bind_like PF02298 Domain 15 9940 82.6 31 43.25 Changed Plastocyanin-like domain
CvfB_WH PF17783 Domain 51 2541 57.9 41 20.59 Changed CvfB-like winged helix domain
CVNH PF08881 Domain 126 1946 103.1 24 49.92 Changed CVNH domain
CWC25 PF12542 Family 112 1543 93 33 22.01 Changed Pre-mRNA splicing factor
cwf18 PF08315 Family 129 1586 131 35 69.78 Changed cwf18 pre-mRNA splicing factor
cwf21 PF08312 Domain 149 3210 46.8 38 5.79 Changed cwf21 domain
CwfJ_C_1 PF04677 Family 8 3442 124.3 29 20.13 Changed Protein similar to CwfJ C-terminus 1
CwfJ_C_2 PF04676 Family 139 3169 97.9 28 15.71 Changed Protein similar to CwfJ C-terminus 2
Cwf_Cwc_15 PF04889 Family 94 1901 203.8 40 90.82 Changed Cwf15/Cwc15 cell cycle control protein
CwsA PF10814 Family 6 70 122.8 53 90.89 Changed Cell wall synthesis protein CwsA
CW_7 PF08230 Domain 24 554 38.6 50 19.37 Changed CW_7 repeat
CW_binding_2 PF04122 Domain 958 6468 90 28 32.87 Changed ell wall binding domain 2 (CWB2)
CX PF01705 Family 62 340 56.2 30 22.2 Changed CX module
CX9C PF16860 Domain 34 711 43.6 31 42.8 Changed CHCH-CHCH-like Cx9C, IMS import disulfide relay-system,
CxC1 PF18802 Domain 31 870 93.2 26 14.59 Changed CxC1 like cysteine cluster associated with KDZ transposases
CxC2 PF18803 Domain 269 2298 97.9 31 14.14 Changed CxC2 like cysteine cluster associated with KDZ transposases
CxC3 PF18804 Domain 22 243 101.4 27 18.52 Changed CxC3 like cysteine cluster associated with KDZ transposases
CxC4 PF18717 Domain 59 724 127.4 32 12.66 Changed CxC4 like cysteine cluster associated with KDZ transposases
CxC5 PF18718 Domain 123 599 111 23 20.6 Changed CxC5 like cysteine cluster associated with KDZ transposases
CxC6 PF18721 Domain 224 585 67.3 33 13.49 Changed CxC6 like cysteine cluster associated with KDZ transposases
CxC7 PF18866 Domain 3 45 61.7 51 18.77 Changed CxC7 like cysteine cluster associated with KDZ transposases
CXCL17 PF15211 Family 10 100 81.5 67 74.28 Changed VEGF co-regulated chemokine 1
CXCR4_N PF12109 Domain 6 228 32.9 70 9.13 Changed CXCR4 Chemokine receptor N terminal
CXCXC PF03128 Repeat 29 1108 12.8 54 6.54 Changed CXCXC repeat
CxxCxxCC PF03692 Family 35 7653 92.8 22 54.48 Changed Putative zinc- or iron-chelating domain
CXXC_Zn-b_euk PF05907 Family 135 1837 140.9 36 77.55 Changed CXXC motif containing zinc binding protein, eukaryotic
Cyanate_lyase PF02560 Domain 60 1997 68.3 54 41.37 Changed Cyanate lyase C-terminal domain
Cyanophycin_syn PF18921 Domain 42 1522 111.6 36 13.54 Changed Cyanophycin synthase-like N-terminal domain
Cybc1_Eros PF15169 Family 14 401 168.5 62 88.83 Changed Cytochrome b-245 chaperone 1 / Eros
CybS PF05328 Family 35 1562 123.8 33 70.74 Changed CybS, succinate dehydrogenase cytochrome B small subunit
Cyc-maltodext_C PF10438 Domain 72 783 76.4 31 12.46 Changed Cyclo-malto-dextrinase C-terminal domain
Cyc-maltodext_N PF09087 Domain 66 770 87 36 14.03 Changed Cyclomaltodextrinase, N-terminal
Cyclase PF04199 Family 367 10672 179.2 19 64.05 Changed Putative cyclase
Cyclase_polyket PF04673 Domain 38 602 103.2 48 92.19 Changed Polyketide synthesis cyclase
Cyclin PF08613 Family 6 7248 142.8 24 37.1 Changed Cyclin
Cyclin_C PF02984 Domain 237 16952 116.3 19 27.62 Changed Cyclin, C-terminal domain
Cyclin_C_2 PF16899 Domain 92 1833 117 25 31.38 Changed Cyclin C-terminal domain
Cyclin_D1_bind PF12014 Domain 97 2007 172.9 27 32.44 Changed Cyclin D1 binding domain
Cyclin_N PF00134 Domain 95 33915 125.6 21 30.93 Changed Cyclin, N-terminal domain
Cyclin_N2 PF16500 Disordered 79 535 112.5 29 26.06 Changed Cyclin-A N-terminal APC/C binding region
Cyclophil_like PF04126 Family 13 286 118.1 36 82.37 Changed Cyclophilin-like
Cyclophil_like2 PF18050 Domain 75 1117 107.6 27 67.39 Changed Cyclophilin-like family
Cyclotide PF03784 Domain 30 8 29.8 47 36.9 Changed Cyclotide family
Cyd_oper_YbgE PF09600 Family 26 314 77.9 33 81.72 Changed Cyd operon protein YbgE (Cyd_oper_YbgE)
CYLD_phos_site PF16607 Disordered 6 597 137 57 15.78 Changed Phosphorylation region of CYLD, unstructured
Cylicin_N PF15241 Family 15 189 97.6 50 21.61 Changed Cylicin N-terminus
CymA PF16941 Family 1 9 337.9 41 99.7 Changed Putative cyclodextrin porin
CypI PF06646 Family 5 64 327.5 29 84.64 Changed Extracytoplasmic thiamine-binding lipoprotein
Cypo_polyhedrin PF05865 Family 1 2 248 94 100 Changed Cypovirus polyhedrin protein
CYRIA-B_Rac1-bd PF07159 Domain 31 3282 248.2 39 38 Changed CYRIA/CYRIB Rac1 binding domain
CyRPA PF18638 Repeat 4 52 257.3 35 57.15 Changed Cysteine-Rich Protective Antigen 6 bladed domain
CysA_C_terminal PF17850 Domain 209 723 43.2 33 12.05 Changed CysA C-terminal regulatory domain
CysG_dimeriser PF10414 Domain 150 1948 57 28 13.1 Changed Sirohaem synthase dimerisation region
Cystatin PF00031 Domain 34 6502 90.2 18 45.19 Changed Cystatin domain
CYSTM PF12734 Family 42 1528 52.2 34 53.95 Changed Cysteine-rich TM module stress tolerance
Cys_box PF17869 Domain 6 511 70.5 62 11.35 Changed Anosmin cysteine rich domain
Cys_knot PF00007 Domain 24 4182 95.9 26 33.49 Changed Cystine-knot domain
Cys_Knot_tox PF17486 Family 9 0 0 0 0 Changed Cystine knot toxins
Cys_Met_Meta_PP PF01053 Domain 25 31533 368.7 33 89.9 Changed Cys/Met metabolism PLP-dependent enzyme
Cys_rich_CPCC PF14206 Family 29 552 69.5 37 57.1 Changed Cysteine-rich CPCC
Cys_rich_CPXG PF14255 Family 60 991 50.8 37 78.38 Changed Cysteine-rich CPXCG
Cys_rich_CWC PF14375 Family 47 731 49.4 32 61.4 Changed Cysteine-rich CWC
Cys_rich_FGFR PF00839 Family 61 15036 59.8 25 73.02 Changed Cysteine rich repeat
Cys_rich_KTR PF14205 Family 18 465 51.8 54 81.93 Changed Cysteine-rich KTR
Cys_rich_VLP PF14194 Family 18 538 54.7 55 43.55 Changed Cysteine-rich VLP
Cyt-b5 PF00173 Domain 80 28468 81.2 26 15.57 Changed Cytochrome b5-like Heme/Steroid binding domain
Cytadhesin_P30 PF07271 Family 3 7 200 41 41.2 Changed Cytadhesin P30/P32
CYTH PF01928 Domain 51 7234 172.3 17 56.65 Changed CYTH domain
Cytidylate_kin PF02224 Domain 12 8253 202.1 39 83.51 Changed Cytidylate kinase
Cytidylate_kin2 PF13189 Domain 40 2948 171.4 26 74.24 Changed Cytidylate kinase-like family
CYTL1 PF15153 Family 8 295 123.6 48 87.02 Changed Cytokine-like protein 1
CytochromB561_N PF09786 Family 15 1182 448.9 32 87.77 Changed Cytochrome B561, N terminal
Cytochrome-c551 PF10643 Family 2 19 175.1 34 75.94 Changed Photosystem P840 reaction-centre cytochrome c-551
Cytochrome_B PF00033 Domain 8 4593 181.4 45 48.75 Changed Cytochrome b/b6/petB
Cytochrome_C554 PF13435 Family 35 2923 69.6 17 15.33 Changed Cytochrome c554 and c-prime
Cytochrome_C7 PF14522 Family 75 2311 78.8 25 26.79 Changed Cytochrome c7 and related cytochrome c
Cytochrome_cB PF11783 Family 53 346 170 38 31.89 Changed Cytochrome c bacterial
Cytochrome_CBB3 PF13442 Domain 141 30218 79.9 23 30.09 Changed Cytochrome C oxidase, cbb3-type, subunit III
Cytochrome_P460 PF16694 Domain 67 875 125.7 22 58.53 Changed Cytochrome P460
Cytochrom_B558a PF05038 Family 6 306 159.9 59 86.04 Changed Cytochrome Cytochrome b558 alpha-subunit
Cytochrom_B559 PF00283 Family 15 695 28.6 53 38.39 Changed Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits
Cytochrom_B559a PF00284 Family 37 409 38.1 63 40.45 Changed Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit
Cytochrom_B561 PF03188 Family 36 8343 130.7 23 37.51 Changed Eukaryotic cytochrome b561
Cytochrom_B562 PF07361 Family 35 266 101.9 26 75.27 Changed Cytochrome b562
Cytochrom_B_C PF00032 Domain 156 4475 105.1 35 28.48 Changed Cytochrome b(C-terminal)/b6/petD
Cytochrom_B_N_2 PF13631 Domain 31 2250 170.8 48 33.14 Changed Cytochrome b(N-terminal)/b6/petB
Cytochrom_C PF00034 Domain 53 29176 98.6 18 32.57 Changed Cytochrome c
Cytochrom_C1 PF02167 Family 53 4684 206.8 36 73.21 Changed Cytochrome C1 family
Cytochrom_c3_2 PF14537 Family 38 945 90.2 23 28.36 Changed Cytochrome c3
Cytochrom_C550 PF14495 Domain 25 227 133.9 46 74.06 Changed Cytochrome c-550 domain
Cytochrom_C552 PF02335 Family 24 913 377 31 79.38 Changed Cytochrome c552
Cytochrom_CIII PF02085 Domain 22 1023 92.9 21 39.64 Changed Class III cytochrome C family
Cytochrom_C_2 PF01322 Domain 122 2067 115.7 25 72.65 Changed Cytochrome C'
Cytochrom_C_asm PF01578 Family 39 13522 204.5 21 48.54 Changed Cytochrome C assembly protein
Cytochrom_D1 PF02239 Repeat 8 1934 240.5 22 57.27 Changed Cytochrome D1 heme domain
Cytochrom_NNT PF03264 Family 57 2060 159.7 30 62.48 Changed NapC/NirT cytochrome c family, N-terminal region
CytoC_RC PF02276 Family 17 444 226.4 31 81.43 Changed Photosynthetic reaction centre cytochrome C subunit
Cytokin-bind PF09265 Domain 70 2096 233.9 37 50.86 Changed Cytokinin dehydrogenase 1, FAD and cytokinin binding
Cytokin_check_N PF10407 Family 36 219 69.2 29 6.91 Changed Cdc14 phosphatase binding protein N-terminus
Cytomega_gL PF01801 Family 3 28 218.7 34 81.8 Changed Cytomegalovirus glycoprotein L
Cytomega_TRL10 PF06084 Family 5 10 113.8 25 30.8 Changed Cytomegalovirus TRL10 protein
Cytomega_UL20A PF05984 Family 1 3 102 56 98.08 Changed Cytomegalovirus UL20A protein
Cytomega_UL84 PF06284 Family 1 29 228.3 27 88.38 Changed Cytomegalovirus UL84 protein
Cytomega_US3 PF05963 Family 2 15 181.8 26 93.17 Changed Cytomegalovirus US3 protein
Cytotoxic PF09000 Domain 7 108 72.9 31 17.3 Changed Cytotoxic
Cyto_heme_lyase PF01265 Family 56 2437 231.9 36 80.58 Changed Cytochrome c/c1 heme lyase
Cyt_b-c1_8 PF10890 Family 8 299 69.1 67 72.36 Changed Cytochrome b-c1 complex subunit 8
Cyt_bd_oxida_I PF01654 Family 525 7556 421.9 35 91.88 Changed Cytochrome bd terminal oxidase subunit I
Cyt_bd_oxida_II PF02322 Family 581 7112 321.8 29 94.03 Changed Cytochrome bd terminal oxidase subunit II
Cyt_c_ox_IV PF12270 Family 47 1514 132.9 41 96.83 Changed Cytochrome c oxidase subunit IV
CYYR1 PF10873 Family 6 279 129.6 62 80.67 Changed Cysteine and tyrosine-rich protein 1
CZB PF13682 Domain 326 1693 67.2 23 14.38 Changed Chemoreceptor zinc-binding domain
CzcE PF16986 Domain 11 115 79.2 33 65.58 Changed Heavy-metal resistance protein CzcE
C_GCAxxG_C_C PF09719 Family 334 1790 120.7 24 75.46 Changed Putative redox-active protein (C_GCAxxG_C_C)
C_Hendra PF16821 Family 9 14 151.4 19 94.81 Changed C protein from hendra and measles viruses
C_LFY_FLO PF17538 Domain 3 236 158.6 80 42.96 Changed DNA Binding Domain (C-terminal) Leafy/Floricaula
C_tripleX PF02363 Repeat 165 4000 17.5 37 34.53 Changed Cysteine rich repeat
New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z