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Powering down the Pfam website
On October 5th, we began redirecting traffic from Pfam (pfam.xfam.org) to InterPro (www.ebi.ac.uk/interpro). The Pfam website will remain available at pfam-legacy.xfam.org until January 2023, when it will be decommissioned. You can read more about the sunset period in our blog post.

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Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
H-kinase_dim PF02895 Domain 59 5921 71.5 31 8.98 Changed Signal transducing histidine kinase, homodimeric domain
H-K_ATPase_N PF09040 Domain 2 145 40.7 83 3.93 Changed Gastric H+/K+-ATPase, N terminal domain
H2O2_YaaD PF03883 Family 291 4383 237.3 31 92.96 Changed Peroxide stress protein YaaA
H2TH PF06831 Domain 13 12293 90.8 31 30.42 Changed Formamidopyrimidine-DNA glycosylase H2TH domain
HA PF03457 Domain 236 4198 67.3 25 31.53 Changed Helicase associated domain
HA1 PF18239 Domain 1 7 89.1 55 13.1 Changed Hemagglutinin I
HA2 PF04408 Domain 361 28891 113.9 26 11.09 Changed Helicase associated domain (HA2)
HA70_C PF17993 Domain 2 4 133.5 62 21.35 Changed Haemagglutinin 70 C-terminal domain
HABP4_PAI-RBP1 PF04774 Family 69 2680 101.3 29 29.46 Changed Hyaluronan / mRNA binding family
HAD PF12710 Family 92 17784 177.2 19 54.79 Changed haloacid dehalogenase-like hydrolase
HAD_2 PF13419 Family 50 67281 176.1 18 70.55 Changed Haloacid dehalogenase-like hydrolase
HAD_SAK_1 PF10307 Domain 72 576 201.7 45 36.73 Changed HAD domain family 1 in Swiss Army Knife RNA repair proteins
HAD_SAK_2 PF18143 Family 84 1055 145.6 21 69.85 Changed HAD domain in Swiss Army Knife RNA repair proteins
Haemadin PF09065 Domain 2 0 0 0 0 Changed Haemadin
Haemocyan_bet_s PF14830 Family 22 64 101.1 36 23.8 Changed Haemocyanin beta-sandwich
Haem_bd PF14376 Family 82 920 129.3 31 59.72 Changed Haem-binding domain
Haem_oxygenas_2 PF14518 Family 125 2738 174.9 20 48.32 Changed Iron-containing redox enzyme
HAGH_C PF16123 Family 427 5941 82.5 36 28.49 Changed Hydroxyacylglutathione hydrolase C-terminus
Hairy_orange PF07527 Domain 98 4401 40.5 34 13.47 Changed Hairy Orange
HalOD1 PF18545 Domain 102 1263 72.6 29 70.09 Changed Halobacterial output domain 1
HalOD2 PF18547 Domain 3 11 51.5 40 19.09 Changed Halobacterial output domain 2
Halogen_Hydrol PF10112 Family 27 1159 193.8 19 66.99 Changed 5-bromo-4-chloroindolyl phosphate hydrolysis protein
Halo_GVPC PF05465 Repeat 21 51 31.4 32 41.77 Changed Halobacterial gas vesicle protein C (GVPC) repeat
HalX PF08663 Domain 107 457 67.2 28 29.9 Changed HalX domain
HALZ PF02183 Coiled-coil 104 4479 39.4 43 14.15 Changed Homeobox associated leucine zipper
Ham1p_like PF01725 Domain 1061 10408 183.9 36 88.61 Changed Ham1 family
HamA PF08878 Family 53 467 221.6 15 72.33 Changed HamA
Hamartin PF04388 Family 26 1560 460.2 27 58.87 Changed Hamartin protein
HAMP PF00672 Domain 212 73262 53.6 25 9.47 Changed HAMP domain
HAMP_2 PF18947 Domain 134 10265 66.3 43 15.13 Changed HAMP domain
HAMP_N3 PF18575 Domain 100 421 42.7 41 7.97 Changed HAMP N-terminal domain 3
HAND PF09110 Domain 101 2529 98.1 47 9.63 Changed HAND
Hanta_G1 PF01567 Family 1 11 482.9 47 44.9 Changed Hantavirus glycoprotein G1
Hanta_G2 PF01561 Family 2 34 523.6 29 39.68 Changed Hantavirus/Nairovirus glycoprotein G2
Hanta_nucleocap PF00846 Family 1 11 429.7 56 99.79 Changed Hantavirus nucleocapsid protein
HAP PF03866 Family 2 2 122 60 34.27 Changed Hydrophobic abundant protein (HAP)
HAP1_N PF04849 Family 22 2573 256.2 50 34.67 Changed HAP1 N-terminal conserved region
HAP2-GCS1 PF10699 Domain 13 610 355.4 26 60.21 Changed Male gamete fusion factor
Hap4_Hap_bind PF10297 Motif 13 681 16.7 81 2.96 Changed Minimal binding motif of Hap4 for binding to Hap2/3/5
HapK PF11639 Family 2 128 101.3 31 96.59 Changed REDY-like protein HapK
Harakiri PF15196 Family 2 58 88.3 79 98.98 Changed Activator of apoptosis harakiri
HARE-HTH PF05066 Family 36 2867 68.4 28 7.6 Changed HB1, ASXL, restriction endonuclease HTH domain
HARP PF07443 Family 54 952 53.2 45 10.93 Changed HepA-related protein (HARP)
Harpin PF04877 Family 11 32 240.5 24 77.24 Changed HrpZ
HAS-barrel PF09378 Domain 36 288 98.5 24 21.11 Changed HAS barrel domain
HasA PF06438 Domain 3 32 187.3 26 75.31 Changed Heme-binding protein A (HasA)
Haspin_kinase PF12330 Family 8 1547 353.4 24 54.73 Changed Haspin like kinase domain
HAT PF02184 Repeat 3 2679 32 48 7.02 Changed HAT (Half-A-TPR) repeat
Hat1_N PF10394 Domain 161 1760 158.3 29 34.57 Changed Histone acetyl transferase HAT1 N-terminus
HATPase_c PF02518 Domain 658 300774 117.1 25 17.95 Changed Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c_2 PF13581 Domain 64 27413 119.2 21 36.57 Changed Histidine kinase-like ATPase domain
HATPase_c_3 PF13589 Domain 19 22546 128.4 23 17.34 Changed Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c_4 PF13749 Domain 72 3579 86.1 24 18.84 Changed Putative ATP-dependent DNA helicase recG C-terminal
HATPase_c_5 PF14501 Domain 28 4178 102.5 23 25.12 Changed GHKL domain
HAT_KAT11 PF08214 Domain 25 3746 298.2 37 18.34 Changed Histone acetylation protein
HAUS-augmin3 PF14932 Family 38 889 242 30 43.52 Changed HAUS augmin-like complex subunit 3
HAUS2 PF15003 Family 6 744 157.7 36 70.05 Changed HAUS augmin-like complex subunit 2
HAUS4 PF14735 Family 21 829 198.9 31 57.1 Changed HAUS augmin-like complex subunit 4
HAUS5 PF14817 Family 21 719 492.4 28 89.29 Changed HAUS augmin-like complex subunit 5
HAUS6_N PF14661 Family 50 1299 215.8 23 30.36 Changed HAUS augmin-like complex subunit 6 N-terminus
HAV_VP PF12944 Domain 2 3 166.3 60 7.56 Changed Hepatitis A virus viral protein VP
HBB PF06777 Domain 39 2104 142.5 43 18.99 Changed Helical and beta-bridge domain
HBD PF18534 Domain 7 16 83.9 31 28.8 Changed Helical bundle domain
HBM PF16591 Family 9 261 236.1 16 36.14 Changed Helical bimodular sensor domain
HbpS-like PF03928 Family 485 6955 128.5 25 74.82 Changed Haem degrading protein HbpS-like
HbrB PF08539 Domain 73 1558 128.9 35 23.3 Changed HbrB-like
HBS1_N PF08938 Domain 79 1432 84.3 25 12.52 Changed HBS1 N-terminus
Hc1 PF07432 Family 50 686 56.7 44 76.49 Changed Histone H1-like protein Hc1
HC2 PF07382 Disordered 8 765 150.2 39 51.22 Changed Histone H1-like nucleoprotein HC2
HCBP_related PF06594 Domain 141 1962 42 26 7.11 Changed Haemolysin-type calcium binding protein related domain
Hce2 PF14856 Family 91 664 100.9 25 20.79 Changed Pathogen effector; putative necrosis-inducing factor
HcgB PF11576 Domain 13 18 153.6 48 82.41 Changed FeGP cofactor biosynthesis protein HcgB, guanylyltransferase
HcgC PF06690 Family 11 20 231.4 35 90.25 Changed FeGP cofactor biosynthesis protein, methyltransferase HcgC
HcgF PF06787 Family 14 19 160.9 41 91.97 Changed FeGP cofactor biosynthesis protein HcgF
HCMVantigenic_N PF12154 Disordered 3 2 36.5 53 4.03 Changed Glycoprotein B N-terminal antigenic domain of HCMV
HCMV_UL124 PF17609 Family 1 3 129.3 65 85.27 Changed Family of unknown function
HCMV_UL139 PF12507 Family 8 167 115.3 44 57.75 Changed Human Cytomegalovirus UL139 protein
HCNGP PF07818 Family 88 1752 94.8 36 30.02 Changed HCNGP-like protein
HCO3_cotransp PF00955 Family 66 17169 315 30 50.36 Changed HCO3- transporter family
HCR PF07111 Coiled-coil 3 512 503.9 43 84.65 Changed Alpha helical coiled-coil rod protein (HCR)
HCV_capsid PF01543 Family 5 3 102 16 9.44 Changed Hepatitis C virus capsid protein
HCV_core PF01542 Family 1 2 56.5 42 3.7 Changed Hepatitis C virus core protein
HCV_env PF01539 Family 4 1 190 100 6.31 Changed Hepatitis C virus envelope glycoprotein E1
HCV_NS1 PF01560 Family 10 1 344 100 11.42 Changed Hepatitis C virus non-structural protein E2/NS1
HCV_NS2 PF01538 Family 29 2 196 22 6.56 Changed Hepatitis C virus non-structural protein NS2
HCV_NS4a PF01006 Family 15 2 61 22 2.04 Changed Hepatitis C virus non-structural protein NS4a
HCV_NS4b PF01001 Family 11 2 192 22 6.42 Changed Hepatitis C virus non-structural protein NS4b
HCV_NS5a PF01506 Family 19 2 23 22 0.77 Changed Hepatitis C virus non-structural 5a protein membrane anchor
HCV_NS5a_1a PF08300 Domain 2 2 58 39 1.94 Changed Hepatitis C virus non-structural 5a zinc finger domain
HCV_NS5a_1b PF08301 Domain 20 2 100 17 3.35 Changed Hepatitis C virus non-structural 5a domain 1b
HCV_NS5a_C PF12941 Family 1 1 242 100 8.04 Changed HCV NS5a protein C-terminal region
HcyBio PF01837 Domain 87 457 350.7 46 87.05 Changed Homocysteine biosynthesis enzyme, sulfur-incorporation
HD PF01966 Family 154 51616 124.2 17 28.95 Changed HD domain
HD-ZIP_N PF04618 Domain 23 676 105 37 35.67 Changed HD-ZIP protein N terminus
HDA2-3 PF11496 Domain 21 409 254.7 23 27.21 Changed Class II histone deacetylase complex subunits 2 and 3
HDAC4_Gln PF12203 Family 10 2384 89.1 71 9.79 Changed Glutamine rich N terminal domain of histone deacetylase 4
HDC PF02329 Domain 4 45 266.9 46 93.05 Changed Histidine carboxylase PI chain
HdcB PF17528 Family 3 6 162.7 35 97.02 Changed Histidine decarboxylase maturation protein HdcB
HdeA PF06411 Domain 21 288 89.4 19 79.91 Changed HdeA/HdeB family
hDGE_amylase PF14701 Domain 54 1849 377.2 39 28.01 Changed Glycogen debranching enzyme, glucanotransferase domain
HDNR PF15115 Family 12 386 152.6 30 80.02 Changed Domain of unknown function with conserved HDNR motif
HDOD PF08668 Domain 46 8071 174.8 19 45.58 Changed HDOD domain
HDPD PF02924 Domain 68 682 121.3 25 88.75 Changed Bacteriophage lambda head decoration protein D
HDV_ag PF01517 Family 2 4 176.2 53 88.9 Changed Hepatitis delta virus delta antigen
HD_3 PF13023 Domain 71 4471 156.3 28 67.6 Changed HD domain
HD_4 PF13328 Family 55 13635 147.5 38 23.22 Changed HD domain
HD_5 PF13487 Domain 37 7901 63.6 33 13.95 Changed HD domain
HD_6 PF18019 Domain 143 1850 197.3 15 23.56 Changed HD domain
HD_assoc PF13286 Domain 149 6074 92.5 24 22.79 Changed Phosphohydrolase-associated domain
HD_assoc_2 PF19276 Family 83 2667 139 27 32.09 Changed HD associated region
Head-tail_con PF12236 Family 32 681 456.1 22 87.52 Changed Bacteriophage head to tail connecting protein
Headcase PF16002 Family 8 620 167.1 51 38.32 Changed Headcase protein
Head_binding PF09008 Domain 4 71 108.5 51 17.86 Changed Head binding
HEAT PF02985 Repeat 424 11597 30.6 26 3.45 Changed HEAT repeat
HEAT_2 PF13646 Repeat 119 34437 88.1 21 22.08 Changed HEAT repeats
HEAT_EZ PF13513 Repeat 132 7453 55.5 32 5.58 Changed HEAT-like repeat
HEAT_PBS PF03130 Repeat 221 1550 27.1 30 8.77 Changed PBS lyase HEAT-like repeat
HEAT_UF PF18817 Repeat 2 2 45 51 18.99 Changed Repeat of uncharacterized protein PH0542
HECA PF15353 Family 13 478 97.5 64 20.09 Changed Headcase protein family homologue
HECT PF00632 Domain 87 30955 292.4 30 19.61 Changed HECT-domain (ubiquitin-transferase)
HECT_2 PF09814 Domain 91 1694 342.4 18 75.01 Changed HECT-like Ubiquitin-conjugating enzyme (E2)-binding
HECW1_helix PF18436 Domain 5 1257 66.1 71 4.73 Changed Helical box domain of E3 ubiquitin-protein ligase HECW1
HECW_N PF16562 Domain 8 1091 112.5 68 8.33 Changed N-terminal domain of E3 ubiquitin-protein ligase HECW1 and 2
HEF_HK PF19191 Domain 30 68 65.8 33 7.18 Changed HEF_HK domain
hEGF PF12661 Domain 335 32688 21.1 41 3.02 Changed Human growth factor-like EGF
HeH PF12949 Domain 38 865 34.7 45 5.42 Changed HeH/LEM domain
Helicase_C PF00271 Domain 421 272115 117.2 20 12.69 Changed Helicase conserved C-terminal domain
Helicase_C_2 PF13307 Domain 87 13430 170.1 25 21.25 Changed Helicase C-terminal domain
Helicase_C_3 PF13625 Domain 107 5134 125.1 31 18.01 Changed Helicase conserved C-terminal domain
Helicase_C_4 PF13871 Domain 59 3010 256.4 49 20.53 Changed C-terminal domain on Strawberry notch homologue
Helicase_IV_N PF12462 Family 19 221 160.8 31 23.69 Changed DNA helicase IV / RNA helicase N terminal
Helicase_PWI PF18149 Domain 29 2062 107.5 37 5.51 Changed N-terminal helicase PWI domain
Helicase_RecD PF05127 Domain 99 2676 189.4 48 20.76 Changed Helicase
Helicase_Sgs1 PF11408 Family 5 48 79.8 30 6.09 Changed Sgs1 RecQ helicase
Heliorhodopsin PF18761 Domain 46 191 234.3 39 84.06 Changed Heliorhodopsin
Helitron_like_N PF14214 Family 79 6888 148.8 23 17.98 Changed Helitron helicase-like domain at N-terminus
HeLo PF14479 Domain 92 1798 191.3 16 32.44 Changed Prion-inhibition and propagation
Helo_like_N PF17111 Family 33 2056 175.7 16 31.02 Changed Fungal N-terminal domain of STAND proteins
HELP PF03451 Family 45 6273 65.8 46 8.45 Changed HELP motif
Helveticin_J PF17312 Family 5 58 278.8 27 85.13 Changed Bacteriocin helveticin-J
HEM4 PF02602 Family 72 11438 222.9 19 65.72 Changed Uroporphyrinogen-III synthase HemD
Hemagglutinin PF00509 Family 3 37 501.3 46 95.09 Changed Haemagglutinin
Hema_esterase PF03996 Domain 3 18 343.2 37 75.66 Changed Hemagglutinin esterase
Hema_HEFG PF02710 Family 3 15 144.4 36 29.55 Changed Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein
Hema_stalk PF08720 Domain 1 2 175.5 57 26.61 Changed Influenza C hemagglutinin stalk
HemeBinding_Shp PF11545 Family 45 79 141 32 44.71 Changed Cell surface heme-binding protein Shp
Hemerythrin PF01814 Domain 188 17648 129.6 16 48.13 Changed Hemerythrin HHE cation binding domain
Heme_oxygenase PF01126 Domain 18 4116 191.4 24 71.81 Changed Heme oxygenase
HemN_C PF06969 Domain 42 7476 65.6 23 16.26 Changed HemN C-terminal domain
Hemocyanin_C PF03723 Domain 90 1027 224.8 28 34.33 Changed Hemocyanin, ig-like domain
Hemocyanin_M PF00372 Domain 77 996 245.2 27 37.67 Changed Hemocyanin, copper containing domain
Hemocyanin_N PF03722 Domain 75 817 117.1 27 16.73 Changed Hemocyanin, all-alpha domain
HemolysinCabind PF00353 Repeat 252 127693 34 37 26.01 Changed RTX calcium-binding nonapeptide repeat (4 copies)
Hemolysin_N PF12563 Family 2 12 182.2 29 27.66 Changed Hemolytic toxin N terminal
Hemopexin PF00045 Repeat 76 28053 44.9 27 25.19 Changed Hemopexin
hemP PF10636 Family 79 1253 36.9 46 56.71 Changed Hemin uptake protein hemP
HemS PF05171 Domain 49 1585 130.1 29 64.4 Changed Haemin-degrading HemS.ChuX domain
HemX PF04375 Family 16 1387 227.5 26 55.96 Changed HemX, putative uroporphyrinogen-III C-methyltransferase
HemY_N PF07219 Repeat 158 2259 108.5 25 24.42 Changed HemY protein N-terminus
Hen1_L PF12623 Domain 55 790 238.1 55 50.28 Changed RNA repair, ligase-Pnkp-associating, region of Hen1
Hen1_Lam_C PF18441 Domain 22 297 129.1 48 14.71 Changed Hen1 La-motif C-terminal domain
Hepar_II_III PF07940 Family 64 4816 237.4 14 33.76 Changed Heparinase II/III-like protein
Hepar_II_III_N PF16889 Domain 18 1325 272.5 17 41.74 Changed Heparinase II/III N-terminus
Hepatitis_core PF00906 Domain 2 68 96.4 24 85.48 Changed Hepatitis core antigen
Hepcidin PF06446 Domain 16 348 52.1 39 56.6 Changed Hepcidin
HepII_C PF18675 Domain 4 78 86.6 29 7.24 Changed Heparinase II C-terminal domain
HEPN PF05168 Family 78 3405 118.1 16 13.45 Changed HEPN domain
HEPN-like_int PF18867 Domain 1 1 151 100 69.27 Changed HEPN-like integron domain
HEPN_AbiA_CTD PF18732 Domain 5 10 135.6 38 23.01 Changed HEPN like, Abia C-terminal domain
HEPN_AbiU2 PF18734 Domain 52 195 186 12 81.61 Changed AbiU2
HEPN_AbiV PF18728 Domain 51 148 155.6 18 67.86 Changed AbiV
HEPN_Apea PF18739 Domain 121 575 130.9 16 38.25 Changed Apea-like HEPN
HEPN_Cthe2314 PF18730 Domain 59 195 180.2 26 74.36 Changed Cthe_2314-like HEPN
HEPN_DZIP3 PF18738 Domain 70 1144 137 25 16.07 Changed DZIP3/ hRUL138-like HEPN
HEPN_LA2681 PF18733 Domain 33 112 196.8 26 42.25 Changed LA2681-like HEPN
HEPN_MAE_28990 PF18737 Domain 23 185 208.4 18 90.81 Changed MAE_28990/MAE_18760-like HEPN
HEPN_RES_NTD1 PF18870 Domain 41 114 130.7 20 33.45 Changed HEPN/RES N-terminal domain 1
HEPN_RiboL-PSP PF18735 Domain 169 459 187.1 12 85.42 Changed RiboL-PSP-HEPN
HEPN_RnaseLS PF18869 Family 1 2 125 30 35.06 Changed RnaseLS-like HEPN
HEPN_SAV2148 PF18725 Domain 3 318 214.1 83 52.77 Changed SAV2148-like HEPN
HEPN_SAV_6107 PF18726 Domain 63 903 98.3 47 61.15 Changed SAV_6107-like HEPN
HEPN_STY4199 PF18729 Domain 7 35 233.5 51 53.25 Changed STY4199-like HEPN
HEPN_Swt1 PF18731 Domain 62 485 118.8 22 15.11 Changed Swt1-like HEPN
HEPN_Toprim_N PF18871 Domain 19 69 202.4 18 52.96 Changed HEPN/Toprim N-terminal domain 1
HEPPP_synt_1 PF07307 Domain 14 480 204.8 25 77.19 Changed Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
Hepsin-SRCR PF09272 Domain 9 334 99 56 24.77 Changed Hepsin, SRCR domain
HepT-like PF01934 Family 145 3750 102.8 20 82.36 Changed Ribonuclease HepT-like
Hep_59 PF07052 Family 81 1478 97.6 33 31.6 Changed Hepatocellular carcinoma-associated antigen 59
Hep_core_N PF08290 Domain 1 14 26.8 83 12.63 Changed Hepatitis core protein, putative zinc finger
HerA_C PF05872 Domain 8 3505 455.1 43 87.49 Changed Helicase HerA-like C-terminal
Herp-Cyclin PF09241 Domain 1 3 106 81 41.3 Changed Herpesviridae viral cyclin
Herpesvir_UL11 PF10813 Family 5 26 31.1 44 42.38 Changed Herpesvirus UL11 homologue
Herpes_BBRF1 PF04793 Family 4 24 278.5 23 92.08 Changed BRRF1-like protein
Herpes_BLLF1 PF05109 Family 1 79 159.2 25 26.23 Changed Herpes virus major outer envelope glycoprotein (BLLF1)
Herpes_BLRF2 PF05812 Family 5 27 122.3 33 86.28 Changed Herpesvirus BLRF2 protein
Herpes_BMRF2 PF04633 Family 5 26 347.1 27 97.61 Changed Herpesvirus BMRF2 protein
Herpes_BTRF1 PF04682 Family 5 25 249.8 34 66.61 Changed Herpesvirus BTRF1 protein conserved region
Herpes_capsid PF06112 Family 4 23 150 28 89.45 Changed Gammaherpesvirus capsid protein
Herpes_DNAp_acc PF04929 Family 5 26 389.5 31 96.78 Changed Herpes DNA replication accessory factor
Herpes_env PF01673 Family 5 141 291.6 20 86.45 Changed Herpesvirus putative major envelope glycoprotein
Herpes_gE PF02480 Domain 5 32 174.8 31 32.77 Changed Alphaherpesvirus glycoprotein E
Herpes_gE_N PF20418 Domain 5 22 129 22 23.72 New Alphaherpesvirus glycoprotein E N-terminal
Herpes_gI PF01688 Domain 5 30 158.2 29 41.47 Changed Alphaherpesvirus glycoprotein I
Herpes_glycoH_C PF17488 Domain 9 86 143 26 18.7 Changed Herpesvirus glycoprotein H C-terminal domain
Herpes_glycop PF01528 Family 7 86 360.2 28 91.48 Changed Herpesvirus glycoprotein M
Herpes_glycop_D PF01537 Domain 22 50 119.6 25 24.53 Changed Herpesvirus glycoprotein D/GG/GX domain
Herpes_glycop_H PF02489 Domain 9 83 407.6 16 54.19 Changed Herpesvirus glycoprotein H main domain
Herpes_gp2 PF05955 Family 5 4 225 27 37.82 Changed Equine herpesvirus glycoprotein gp2
Herpes_Helicase PF02689 Family 9 305 297.9 33 51.4 Changed Helicase
Herpes_heli_pri PF05774 Family 3 23 123.7 27 27.5 Changed Herpesvirus helicase-primase complex component
Herpes_HEPA PF03324 Family 8 84 91.3 27 13.09 Changed Herpesvirus DNA helicase/primase complex associated protein
Herpes_ICP4_C PF03585 Family 3 29 395.7 52 28.45 Changed Herpesvirus ICP4-like protein C-terminal region
Herpes_ICP4_N PF03584 Family 4 32 173.2 52 11.89 Changed Herpesvirus ICP4-like protein N-terminal region
Herpes_IE1 PF07340 Family 1 13 283.8 37 55.17 Changed Cytomegalovirus IE1 protein
Herpes_IE2_3 PF03361 Family 5 46 158.9 28 28.15 Changed Herpes virus intermediate/early protein 2/3
Herpes_IE68 PF02479 Family 4 32 122.4 29 38.53 Changed Herpesvirus immediate early protein
Herpes_IR6 PF06307 Family 4 4 204.2 38 84.05 Changed Herpesvirus IR6 protein
Herpes_LAMP2 PF06126 Family 2 4 469.8 30 94.04 Changed Herpesvirus Latent membrane protein 2
Herpes_LMP1 PF05297 Family 2 8 316.1 18 37.94 Changed Herpesvirus latent membrane protein 1 (LMP1)
Herpes_LMP2 PF07415 Family 1 6 394 43 96.45 Changed Gammaherpesvirus latent membrane protein (LMP2) protein
Herpes_LP PF03363 Family 2 16 139.9 84 161.82 Changed Herpesvirus leader protein
Herpes_MCP PF03122 Family 11 87 1346.8 36 98.62 Changed Herpes virus major capsid protein
Herpes_ORF11 PF04797 Family 9 52 345.6 18 84.93 Changed Herpesvirus dUTPase protein
Herpes_ori_bp PF02399 Family 5 414 236.9 16 29.38 Changed Origin of replication binding protein
Herpes_PAP PF03325 Family 2 25 165.7 56 41.97 Changed Herpesvirus polymerase accessory protein
Herpes_pp38 PF04846 Family 2 6 63 44 31.06 Changed Herpesvirus pp38 phosphoprotein
Herpes_pp85 PF04637 Family 2 48 398.2 22 66.68 Changed Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25)
Herpes_TAF50 PF03326 Family 4 32 327 17 63.79 Changed Herpesvirus transcription activation factor (transactivator)
Herpes_teg_N PF04843 Family 10 235 167.2 22 9.04 Changed Herpesvirus tegument protein, N-terminal conserved region
Herpes_TK PF00693 Domain 5 62 255 26 56.74 Changed Thymidine kinase from herpesvirus
Herpes_TK_C PF08465 Family 5 26 32.7 45 5.79 Changed Thymidine kinase from Herpesvirus C-terminal
Herpes_U15 PF05613 Family 2 6 108.7 64 78.74 Changed Human herpesvirus U15 protein
Herpes_U26 PF07402 Family 2 6 291.8 43 99.15 Changed Human herpesvirus U26 protein
Herpes_U30 PF04523 Family 7 56 845.8 20 90.11 Changed Herpes virus tegument protein U30
Herpes_U34 PF04541 Family 5 86 193.3 28 68.34 Changed Herpesvirus virion protein U34
Herpes_U44 PF04533 Family 3 51 194.6 27 79.84 Changed Herpes virus U44 protein
Herpes_U47 PF05467 Family 1 7 352 34 90.09 Changed Herpesvirus glycoprotein U47
Herpes_U5 PF05999 Family 2 28 391 28 61.78 Changed Herpesvirus U5-like family
Herpes_U55 PF06501 Family 3 12 311.4 22 61.43 Changed Human herpesvirus U55 protein
Herpes_U59 PF04529 Family 8 29 378.6 33 95.74 Changed Herpesvirus U59 protein
Herpes_UL1 PF05259 Family 4 31 101.5 28 49.87 Changed Herpesvirus glycoprotein L
Herpes_UL14 PF03580 Family 4 32 147.1 39 64.47 Changed Herpesvirus UL14-like protein
Herpes_UL16 PF03044 Family 12 86 323.2 24 94.13 Changed Herpesvirus UL16/UL94 family
Herpes_UL17 PF04559 Family 36 95 495.9 18 94.98 Changed Herpesvirus UL17 protein
Herpes_UL20 PF04544 Family 4 32 175 30 76.41 Changed Herpesvirus egress protein UL20
Herpes_UL21 PF03252 Family 3 32 500.1 33 92.93 Changed Herpesvirus UL21
Herpes_UL24 PF01646 Family 10 88 180.8 31 65.34 Changed Herpes virus proteins UL24 and UL76
Herpes_UL25 PF01499 Family 10 86 541.4 26 93.8 Changed Herpesvirus UL25 family
Herpes_UL3 PF03369 Family 3 30 133.4 65 60.32 Changed Herpesvirus UL3 protein
Herpes_UL31 PF02718 Family 8 88 262.9 29 86.47 Changed Herpesvirus UL31-like protein
Herpes_UL32 PF06070 Family 2 30 388 24 58.22 Changed Herpesvirus large structural phosphoprotein UL32
Herpes_UL33 PF03581 Family 10 84 75.9 36 63.66 Changed Herpesvirus UL33-like protein
Herpes_UL35 PF04496 Family 3 29 99.6 35 78.63 Changed Herpesvirus UL35 family
Herpes_UL36 PF03586 Family 4 32 251.8 39 8.12 Changed Herpesvirus UL36 tegument protein
Herpes_UL37_1 PF03970 Family 3 31 265.8 31 25.02 Changed Herpesvirus UL37 tegument protein
Herpes_UL37_2 PF07413 Family 2 23 271.6 25 78.56 Changed Betaherpesvirus immediate-early glycoprotein UL37
Herpes_UL4 PF03277 Family 5 30 191.3 31 85.03 Changed Herpesvirus UL4 family
Herpes_UL42 PF02282 Domain 4 49 137.3 22 55.67 Changed DNA polymerase processivity factor (UL42)
Herpes_UL43 PF05072 Family 4 25 348 22 87.98 Changed Herpesvirus UL43 protein
Herpes_UL46 PF03387 Family 3 32 419.9 33 62 Changed Herpesvirus UL46 protein
Herpes_UL47 PF03362 Family 3 33 411.1 26 56.73 Changed Herpesvirus UL47 protein
Herpes_UL49_1 PF03117 Family 6 55 244.5 38 50.03 Changed UL49 family
Herpes_UL49_2 PF04823 Family 4 32 95.1 44 34.89 Changed Herpesvirus UL49 tegument protein
Herpes_UL49_5 PF05702 Family 8 20 93.5 28 97.04 Changed Herpesvirus UL49.5 envelope/tegument protein
Herpes_UL51 PF04540 Family 3 32 156.6 46 63.63 Changed Herpesvirus UL51 protein
Herpes_UL52 PF03121 Family 38 940 64 41 10.72 Changed Herpesviridae UL52/UL70 DNA primase
Herpes_UL55 PF04537 Family 3 25 165.5 33 89.96 Changed Herpesvirus UL55 protein
Herpes_UL56 PF04534 Family 2 8 191.9 50 80.28 Changed Herpesvirus UL56 protein
Herpes_UL6 PF01763 Family 11 87 552.7 32 83.37 Changed Herpesvirus UL6 like
Herpes_UL69 PF05459 Family 12 90 212.9 24 38.34 Changed Herpesvirus transcriptional regulator family
Herpes_UL7 PF01677 Family 11 83 219 23 77.2 Changed Herpesvirus UL7 like
Herpes_UL73 PF03554 Family 9 59 80 30 76.91 Changed UL73 viral envelope glycoprotein
Herpes_UL74 PF07982 Family 1 17 308.6 33 76.51 Changed Herpes UL74 glycoproteins
Herpes_UL79 PF03049 Family 6 53 248.5 33 92.47 Changed UL79 family
Herpes_UL82_83 PF05784 Family 3 53 334.2 24 60.58 Changed Betaherpesvirus UL82/83 protein N terminus
Herpes_UL87 PF03043 Family 5 55 559.8 37 69.58 Changed Herpesvirus UL87 family
Herpes_UL92 PF03048 Family 7 162 126.2 32 42.42 Changed UL92 family
Herpes_UL95 PF03038 Family 6 52 343.2 32 92.57 Changed UL95 family
Herpes_US12 PF05363 Family 2 9 77 36 46.6 Changed Herpesvirus US12 family
Herpes_US9 PF06072 Family 2 20 57.8 43 52.98 Changed Alphaherpesvirus tegument protein US9
Herpes_V23 PF01802 Family 11 87 299.1 29 96.98 Changed Herpesvirus VP23 like capsid protein
Herpes_VP19C PF03327 Family 11 86 287.4 22 77.57 Changed Herpesvirus capsid shell protein VP19C
Herpeto_peptide PF14409 Family 3 8 54.2 37 78.48 Changed Ribosomally synthesized peptide in Herpetosiphon
HERV-K_env_2 PF13804 Domain 11 67 146 40 25.08 Changed Retro-transcribing viruses envelope glycoprotein
HERV-K_REC PF15695 Family 2 58 78.4 44 23.42 Changed Rec (regulator of expression encoded by corf) of HERV-K-113
HET PF06985 Family 99 27779 136.3 21 21.76 Changed Heterokaryon incompatibility protein (HET)
Het-C PF07217 Family 41 1376 495.9 43 65.06 Changed Heterokaryon incompatibility protein Het-C
HET-S PF17108 Family 9 29 22.9 59 2.97 Changed N-terminal small S protein of HET, non-prionic
HET-s_218-289 PF11558 Motif 15 80 63.4 36 20 Changed Het-s 218-289
HetR_C PF18460 Domain 8 91 79.1 63 26.25 Changed Heterocyst differentiation regulator C-terminal Hood domain
HEV_ORF1 PF02444 Family 1 1 114 100 100 Changed Hepatitis E virus ORF-2 (Putative capsid protein)
HEWD PF20576 Domain 40 91 58.5 50 92.24 New HEWD domain
Hexapep PF00132 Repeat 216 0 0 0 0 Changed Bacterial transferase hexapeptide (six repeats)
Hexapep_2 PF14602 Repeat 47 46905 34.5 31 17.27 Changed Hexapeptide repeat of succinyl-transferase
Hexapep_loop PF18776 Repeat 21 45 24 59 5.06 Changed Hexapeptide repeat including loop
HEXIM PF15313 Family 22 555 128.8 44 39.47 Changed Hexamethylene bis-acetamide-inducible protein
Hexokinase_1 PF00349 Domain 378 10452 187.9 38 40.74 Changed Hexokinase
Hexokinase_2 PF03727 Domain 403 10684 225.7 37 49.62 Changed Hexokinase
Hexose_dehydrat PF03559 Domain 70 844 199.8 38 86.81 Changed NDP-hexose 2,3-dehydratase
Hex_IIIa PF02455 Family 2 69 413.9 39 75.53 Changed Hexon-associated protein (IIIa)
He_PIG PF05345 Domain 95 11334 89.7 22 13.89 Changed Putative Ig domain
HflK_N PF12221 Family 80 1747 51.2 38 12.8 Changed Bacterial membrane protein N terminal
HflX_C PF19275 Domain 23 2108 90.8 25 20.08 Changed HflX C-terminal domain
Hfq PF17209 Domain 131 4191 63.7 57 73.94 Changed Hfq protein
Hfx_Cass5 PF18287 Domain 1 24 74.7 38 71.71 Changed Integron Cassette Protein Hfx_Cass5
HGAL PF15666 Family 14 236 86.5 53 57.66 Changed Germinal center-associated lymphoma
HGD-D PF06050 Family 335 3486 310.5 18 45.39 Changed 2-hydroxyglutaryl-CoA dehydratase, D-component
hGDE_central PF14702 Domain 115 1659 246.3 37 16.86 Changed Central domain of human glycogen debranching enzyme
hGDE_N PF14699 Family 122 1456 91.8 33 6.06 Changed N-terminal domain from the human glycogen debranching enzyme
HgmA_C PF04209 Domain 11 4457 146.2 43 33.43 Changed Homogentisate 1,2-dioxygenase C-terminal
HgmA_N PF20510 Domain 11 5269 241.7 37 57.47 New Homogentisate 1,2-dioxygenase N-terminal
HGSNAT_cat PF07786 Domain 49 4380 206 20 53.18 Changed Heparan-alpha-glucosaminide N-acetyltransferase, catalytic
HGTP_anticodon PF03129 Domain 97 42087 93 21 16.31 Changed Anticodon binding domain
HGTP_anticodon2 PF12745 Domain 54 1518 209.7 25 14.29 Changed Anticodon binding domain of tRNAs
HGWP PF03578 Repeat 3 141 26.7 74 29.08 Changed HGWP repeat
HHA PF05321 Family 4 273 57.4 59 81.57 Changed Haemolysin expression modulating protein
HHH PF00633 Motif 87 16414 29.4 44 9.88 Changed Helix-hairpin-helix motif
HhH-GPD PF00730 Domain 50 29081 142.3 21 45.59 Changed HhH-GPD superfamily base excision DNA repair protein
HHH_2 PF12826 Motif 36 10898 61 32 9.49 Changed Helix-hairpin-helix motif
HHH_3 PF12836 Domain 177 16747 63.4 34 14.35 Changed Helix-hairpin-helix motif
HHH_4 PF14490 Family 336 3275 90.9 34 12.27 Changed Helix-hairpin-helix containing domain
HHH_5 PF14520 Domain 190 27835 56.3 24 12.54 Changed Helix-hairpin-helix domain
HHH_6 PF14579 Domain 200 14234 92.6 30 8.01 Changed Helix-hairpin-helix motif
HHH_7 PF14635 Domain 3 1953 104.2 42 6.78 Changed Helix-hairpin-helix motif
HHH_8 PF14716 Domain 226 5824 67.4 26 13.26 Changed Helix-hairpin-helix domain
HHH_9 PF17674 Domain 101 7727 74.5 37 8.22 Changed HHH domain
HHL1-like PF20133 Family 28 274 166.4 38 69.91 Changed Protein HHL1-like
HHV-1_VABD PF16852 Motif 2 5 41.2 76 8.05 Changed Herpes viral adaptor-to-host cellular mRNA binding domain
HHV-5_US34A PF17087 Family 1 3 63.3 69 100 Changed Herpesvirus US34A protein family
HHV6-IE PF03753 Family 2 14 348.4 21 73.53 Changed Human herpesvirus 6 immediate early protein
HH_signal PF01085 Domain 13 1211 141.8 71 33.12 Changed Hedgehog amino-terminal signalling domain
HI0933_like PF03486 Family 44 8517 353.3 29 89.35 Changed HI0933-like protein
HiaBD2 PF15403 Motif 17 1 45 100 19.4 Changed HiaBD2_N domain of Trimeric autotransporter adhesin (GIN)
HicA_toxin PF07927 Family 373 3848 56.9 25 58.96 Changed HicA toxin of bacterial toxin-antitoxin,
HicB PF05534 Domain 19 2104 44.3 30 36.83 Changed HicB family
HicB-like_2 PF15970 Domain 1 27 80.9 36 56.35 Changed HicB_like antitoxin of bacterial toxin-antitoxin system
HicB_lk_antitox PF15919 Domain 21 3479 89 24 86.47 Changed HicB_like antitoxin of bacterial toxin-antitoxin system
Hid1 PF12722 Family 17 1914 604.1 32 91.47 Changed High-temperature-induced dauer-formation protein
HIF-1 PF11413 Family 12 1599 32 60 4.32 Changed Hypoxia-inducible factor-1
HIF-1a_CTAD PF08778 Domain 9 1084 36.8 71 4.63 Changed HIF-1 alpha C terminal transactivation domain
HigB-like_toxin PF05015 Domain 5 2252 88.2 33 94.93 Changed RelE-like toxin of type II toxin-antitoxin system HigB
HigB_toxin PF09907 Family 132 1227 72.6 38 72.82 Changed HigB_toxin, RelE-like toxic component of a toxin-antitoxin system
HIGH_NTase1 PF05636 Family 146 1723 371.3 32 96.45 Changed HIGH Nucleotidyl Transferase
HIGH_NTase1_ass PF16581 Domain 6 33 189.3 36 49.49 Changed Cytidyltransferase-related C-terminal region
HIG_1_N PF04588 Family 192 4566 52.8 26 39.01 Changed Hypoxia induced protein conserved region
HILPDA PF15220 Family 4 65 61.8 68 74.46 Changed Hypoxia-inducible lipid droplet-associated
HIM1 PF08732 Family 11 323 134.3 30 54.22 Changed HIM1
HIN PF02760 Family 38 484 161.4 51 39.37 Changed HIN-200/IF120x domain
HIND PF19252 Motif 46 1363 24 58 3.79 Changed HIND motif
Hint PF01079 Family 22 1967 200.3 29 41.66 Changed Hint module
Hint_2 PF13403 Domain 43 3972 139.4 33 29.12 Changed Hint domain
HIP1_clath_bdg PF16515 Coiled-coil 25 1145 94.8 41 9.86 Changed Clathrin-binding domain of Huntingtin-interacting protein 1
HipA_2 PF20613 Domain 38 1696 230.9 33 86.42 New HipA-like kinase
HipA_C PF07804 Domain 317 4971 227.4 21 57.15 Changed HipA-like C-terminal domain
HIPIP PF01355 Domain 27 626 63.4 35 58.3 Changed High potential iron-sulfur protein
HipN PF18253 Domain 12 1121 41.1 47 11.63 Changed Hsp70-interacting protein N N-terminal domain
Hira PF07569 Family 96 2076 193.8 31 20.51 Changed TUP1-like enhancer of split
HIRAN PF08797 Domain 49 3600 100.8 21 12.51 Changed HIRAN domain
HIRA_B PF09453 Motif 37 842 22.3 51 2.31 Changed HIRA B motif
Hirudin PF00713 Domain 8 0 0 0 0 Changed Hirudin
HisG PF01634 Family 625 8518 159.9 34 59.16 Changed ATP phosphoribosyltransferase
HisG_C PF08029 Domain 341 4587 73.9 35 24.47 Changed HisG, C-terminal domain
HisK-N-like PF20302 Domain 38 1624 127.8 50 10.31 New HisK-N-like globin domain of the ASK signalosome
HisKA PF00512 Domain 265 188697 68 24 10.05 Changed His Kinase A (phospho-acceptor) domain
HisKA_2 PF07568 Domain 64 6292 75.2 33 13.94 Changed Histidine kinase
HisKA_3 PF07730 Domain 163 42435 67.4 26 14.69 Changed Histidine kinase
HisKA_4TM PF16926 Family 3 140 123.8 21 30.82 Changed Archaeal 4TM region of histidine kinase
HisKA_7TM PF16927 Family 150 1926 219.6 16 36.3 Changed N-terminal 7TM region of histidine kinase
HisK_N PF09385 Domain 9 121 129.6 32 35.57 Changed Histidine kinase N terminal
HisK_sensor PF18698 Domain 99 374 125.7 23 21.37 Changed Histidine kinase sensor domain
Histidinol_dh PF00815 Family 568 10125 397.3 41 86.74 Changed Histidinol dehydrogenase
Histone PF00125 Domain 27 30205 103.6 29 61.73 Changed Core histone H2A/H2B/H3/H4
Histone_H2A_C PF16211 Family 133 11133 34.1 60 20.85 Changed C-terminus of histone H2A
Histone_HNS PF00816 Family 170 2801 90.4 25 77.83 Changed H-NS histone family
Hist_deacetyl PF00850 Domain 68 25207 277.7 29 55.1 Changed Histone deacetylase domain
Hist_rich_Ca-bd PF10529 Repeat 29 656 15.1 58 12.86 Changed Histidine-rich Calcium-binding repeat region
His_binding PF02098 Domain 13 31 132.8 17 76.83 Changed Tick histamine binding protein
His_biosynth PF00977 Family 127 18102 230.8 32 84.84 Changed Histidine biosynthesis protein
His_kinase PF06580 Family 1578 23604 79.9 32 15.71 Changed Histidine kinase
His_leader PF08047 Family 2 21 15.5 85 100 Changed Histidine operon leader peptide
His_Me_b4a2 PF18275 Domain 2 3 52 87 27.23 Changed His-Me finger endonuclease beta4-alpha2 domain
His_Phos_1 PF00300 Domain 330 65753 158.2 19 60.17 Changed Histidine phosphatase superfamily (branch 1)
His_Phos_2 PF00328 Family 43 16489 341.7 17 52.66 Changed Histidine phosphatase superfamily (branch 2)
HIT PF01230 Domain 24 20212 95.8 27 59.3 Changed HIT domain
Hit1_C PF18268 Domain 9 55 79.5 38 51.55 Changed Hit1 C-terminal
Hjc PF01870 Family 11 371 92.5 30 62.89 Changed Archaeal holliday junction resolvase (hjc)
HJURP_C PF12347 Domain 32 3234 64.2 43 14.24 Changed Holliday junction regulator protein family C-terminal repeat
HJURP_mid PF12346 Domain 13 141 114.2 63 16.54 Changed Holliday junction recognition protein-associated repeat
HK PF02110 Domain 8 3638 237.3 36 75.12 Changed Hydroxyethylthiazole kinase family
HK97-gp10_like PF04883 Family 50 2157 85.2 18 61.17 Changed Bacteriophage HK97-gp10, putative tail-component
HKR_ArcB_TM PF18415 Domain 33 273 74.3 55 10.07 Changed Histidine kinase receptor ArcB trans-membrane domain
HK_sensor PF16750 Domain 19 123 107.2 30 23.84 Changed Sensor domain of 2-component histidine kinase
HLH PF00010 Domain 141 81103 53.4 29 12.95 Changed Helix-loop-helix DNA-binding domain
HlyC PF02794 Family 11 284 122.5 24 69.91 Changed RTX toxin acyltransferase family
HlyD_2 PF12700 Family 9 852 280.1 15 82.27 Changed HlyD family secretion protein
HlyD_3 PF13437 Family 58 20676 113.8 17 27.78 Changed HlyD family secretion protein
HlyD_D23 PF16576 Domain 124 44998 223.8 18 56.81 Changed Barrel-sandwich domain of CusB or HlyD membrane-fusion
HlyD_D4 PF16572 Domain 4 6 53.5 47 14.39 Changed Long alpha hairpin domain of cation efflux system protein, CusB
HlyE PF06109 Family 2 68 231.9 21 71.82 Changed Haemolysin E (HlyE)
HlyIII PF03006 Family 38 14607 207.2 23 69.33 Changed Haemolysin-III related
HlyU PF10115 Family 24 511 91.6 38 94.79 Changed Transcriptional activator HlyU
HMA PF00403 Domain 48 56698 60.7 25 17.62 Changed Heavy-metal-associated domain
HMA_2 PF19991 Domain 29 844 107.6 19 28.27 Changed Heavy metal associated domain 2
HMBD PF19335 Domain 36 4943 27.9 52 5.54 Changed Heavy metal binding domain
HMD PF03201 Family 15 32 96.6 42 28.08 Changed H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase
HMG-CoA_red PF00368 Family 231 4936 348.2 37 55.72 Changed Hydroxymethylglutaryl-coenzyme A reductase
HMG14_17 PF01101 Family 46 1727 85.8 45 71.06 Changed HMG14 and HMG17
HMGL-like PF00682 Domain 13 33428 263.4 23 49.07 Changed HMGL-like
HMG_box PF00505 Domain 27 40204 67.4 27 13.46 Changed HMG (high mobility group) box
HMG_box_2 PF09011 Domain 9 5019 70 31 15.97 Changed HMG-box domain
HMG_box_5 PF14887 Family 2 807 84.5 70 12.79 Changed HMG (high mobility group) box 5
HMG_CoA_synt_C PF08540 Domain 7 3957 207.8 30 52.47 Changed Hydroxymethylglutaryl-coenzyme A synthase C terminal
HMG_CoA_synt_N PF01154 Domain 3 3405 164.4 47 35.83 Changed Hydroxymethylglutaryl-coenzyme A synthase N terminal
HMMR_C PF15908 Coiled-coil 6 834 136.2 38 13.77 Changed Hyaluronan mediated motility receptor C-terminal
HMMR_N PF15905 Coiled-coil 10 442 281.2 46 39.4 Changed Hyaluronan mediated motility receptor N-terminal
HmuY PF14064 Family 39 796 184.8 17 67.46 Changed HmuY protein
HMW1C_N PF18071 Repeat 6 82 138.5 31 22.42 Changed HMW1C N-terminal
HMw1_D2 PF18254 Domain 5 70 87.7 49 14.22 Changed HMW1 domain 2
Hmw_CFAP97 PF13879 Family 87 1411 100.5 25 27.37 Changed Hemingway/CFA97
HN PF00423 Repeat 7 69 545.4 21 88.1 Changed Haemagglutinin-neuraminidase
HNF-1A_C PF04813 Family 5 311 80.8 60 14.1 Changed Hepatocyte nuclear factor 1 (HNF-1), alpha isoform C terminus
HNF-1B_C PF04812 Family 9 949 215.2 58 40.8 Changed Hepatocyte nuclear factor 1 (HNF-1), beta isoform C terminus
HNF-1_N PF04814 Family 18 2138 171.1 43 37.54 Changed Hepatocyte nuclear factor 1 (HNF-1), N terminus
HNF_C PF09354 Domain 11 648 64.5 58 15.04 Changed HNF3 C-terminal domain
HNH PF01844 Family 44 13273 47.2 26 15.09 Changed HNH endonuclease
HNHc_6 PF16784 Family 2 212 189.7 36 87.08 Changed Putative HNHc nuclease
HNH_2 PF13391 Domain 104 5648 72 23 21.04 Changed HNH endonuclease
HNH_3 PF13392 Domain 39 3953 44.5 27 22.94 Changed HNH endonuclease
HNH_4 PF13395 Domain 29 1565 53.1 30 6.72 Changed HNH endonuclease
HNH_5 PF14279 Domain 31 4509 52.9 42 26.04 Changed HNH endonuclease
HNH_repeat PF18780 Repeat 215 563 52.7 28 30.86 Changed Homing endonuclease associated repeat
hNIFK_binding PF12196 Domain 21 295 38.5 60 14.23 Changed FHA Ki67 binding domain of hNIFK
HNOB PF07700 Domain 139 3450 148.4 25 29.47 Changed Haem-NO-binding
HNOBA PF07701 Domain 60 4707 128.5 28 20.08 Changed Heme NO binding associated
HnRNPA1 PF11627 Family 17 1020 39.1 78 12.65 Changed Nuclear factor hnRNPA1
HnRNP_M_NLS PF11532 Motif 4 490 29.6 87 4.38 Changed HnRNP M nuclear localisation signal
hnRNP_Q_AcD PF18360 Domain 14 2173 69.3 62 12.09 Changed Heterogeneous nuclear ribonucleoprotein Q acidic domain
HOASN PF14515 Domain 2 7 85.1 41 25.95 Changed Haem-oxygenase-associated N-terminal helices
HOATZ-like PF17664 Family 14 258 143.6 39 84.05 Changed Cilia- and flagella-associated protein HOATZ-like
HobA PF12163 Domain 15 78 179.9 39 98.87 Changed DNA replication regulator
HOCHOB PF17943 Domain 13 27 120.3 34 32.33 Changed Homeobox-cysteine loop-homeobox
HofP PF10748 Family 3 54 114.4 29 88.47 Changed DNA utilization proteins HofP
HOIP-UBA PF16678 Family 22 703 142.8 40 9.72 Changed HOIP UBA domain pair
HOK_GEF PF01848 Family 8 188 40.9 41 75.68 Changed Hok/gef family
Holin_2-3 PF13272 Family 15 102 91.5 41 82.69 Changed Putative 2/3 transmembrane domain holin
Holin_9 PF16936 Family 5 58 77.3 60 83.91 Changed Putative holin
Holin_BhlA PF10960 Family 11 239 66.2 30 88.99 Changed BhlA holin family
Holin_BlyA PF05102 Family 2 4 59.8 34 94.09 Changed holin, BlyA family
Holin_SPP1 PF04688 Family 21 367 73.3 29 80.84 Changed SPP1 phage holin
Hol_Tox PF16935 Family 115 313 31.5 33 76.32 Changed Putative Holin-like Toxin (Hol-Tox)
Homeobox_KN PF05920 Family 59 14778 39.8 54 8.75 Changed Homeobox KN domain
Homeodomain PF00046 Domain 146 105144 56.3 33 14.19 Changed Homeodomain
Homez PF11569 Family 3 770 49.4 45 6.4 Changed Homeodomain leucine-zipper encoding, Homez
Homoserine_dh PF00742 Domain 799 10618 184.2 37 37.04 Changed Homoserine dehydrogenase
Hom_end PF05204 Domain 24 212 100.1 24 9.49 Changed Homing endonuclease
Hom_end_hint PF05203 Domain 22 258 256.2 25 20.93 Changed Hom_end-associated Hint
HOOK PF05622 Coiled-coil 18 2584 393.6 40 67.05 Changed HOOK protein coiled-coil region
HOOK_N PF19047 Domain 13 4270 138 36 12.86 Changed HOOK domain
HopA1 PF17914 Domain 23 313 173.1 27 29.29 Changed HopA1 effector protein family
HopJ PF08888 Domain 44 604 106.7 46 90.02 Changed HopJ type III effector protein
HopW1-1 PF15457 Family 4 0 0 0 0 Changed Type III T3SS secreted effector HopW1-1/HopPmaA
HORMA PF02301 Domain 114 4712 173.1 20 52.73 Changed HORMA domain
Hormone_1 PF00103 Domain 13 1909 174.2 28 89.14 Changed Somatotropin hormone family
Hormone_2 PF00123 Family 40 3273 27.9 38 28.78 Changed Peptide hormone
Hormone_3 PF00159 Family 26 935 35.6 58 31.38 Changed Pancreatic hormone peptide
Hormone_4 PF00220 Family 186 397 9 87 6.08 Changed Neurohypophysial hormones, N-terminal Domain
Hormone_5 PF00184 Family 53 600 77.4 60 49.74 Changed Neurohypophysial hormones, C-terminal Domain
Hormone_6 PF00236 Domain 9 410 93.7 56 72.44 Changed Glycoprotein hormone
Hormone_recep PF00104 Domain 315 32199 180.4 22 37.52 Changed Ligand-binding domain of nuclear hormone receptor
Host_attach PF10116 Family 99 740 132.8 24 89.91 Changed Protein required for attachment to host cells
Hox9_act PF04617 Family 38 1005 169.3 40 60.78 Changed Hox9 activation region
HoxA13_N PF12284 Family 20 832 111.8 39 36.63 Changed Hox protein A13 N terminal
HP0268 PF18618 Domain 26 82 80.5 48 99.32 Changed HP0268
HP1451_C PF18472 Domain 29 77 66.8 51 23.05 Changed HP1451 C-terminal domain
HpaB PF03241 Family 126 1887 197.6 25 40.66 Changed 4-hydroxyphenylacetate 3-hydroxylase C terminal
HpaB_N PF11794 Family 142 1880 261.4 32 53.74 Changed 4-hydroxyphenylacetate 3-hydroxylase N terminal
HpaP PF09483 Domain 28 63 90.5 29 35.65 Changed Type III secretion protein (HpaP)
HpcH_HpaI PF03328 Family 16 16360 215.2 22 74.14 Changed HpcH/HpaI aldolase/citrate lyase family
HPD PF05044 Domain 11 1253 135.5 64 20.51 Changed Homeo-prospero domain
Hph PF13694 Family 4 28 171.6 20 35.35 Changed Sec63/Sec62 complex-interacting family
HPHLAWLY PF14925 Family 7 226 476.9 31 65.46 Changed Domain of unknown function
HPIH PF13323 Family 69 569 145.4 37 12.97 Changed N-terminal domain with HPIH motif
HPIP PF15226 Family 7 274 97.2 55 77.67 Changed HCF-1 beta-propeller-interacting protein family
HPIP_like PF18524 Domain 20 32 40 46 45.9 Changed High potential iron-sulfur protein like
HPP PF04982 Family 303 3389 120.3 34 43.92 Changed HPP family
HPPK PF01288 Domain 854 9204 129.4 37 53.26 Changed 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
Hpre_diP_synt_I PF07456 Family 34 1173 144.8 35 80.68 Changed Heptaprenyl diphosphate synthase component I
Hpr_kinase_C PF07475 Domain 50 3792 151.2 38 56.72 Changed HPr Serine kinase C-terminal domain
Hpr_kinase_N PF02603 Family 310 2618 125.2 28 40.05 Changed HPr Serine kinase N terminus
HPS3_C PF14763 Domain 13 557 278.1 51 33.33 Changed Hermansky-Pudlak syndrome 3, C-terminal
HPS3_Mid PF14762 Domain 16 621 342 46 38.1 Changed Hermansky-Pudlak syndrome 3, middle region
HPS3_N PF14761 Domain 19 582 192.3 45 19.76 Changed Hermansky-Pudlak syndrome 3
HPS6 PF15702 Repeat 8 253 346.8 42 45.32 Changed Hermansky-Pudlak syndrome 6 protein N-terminal domain
HPS6_C PF20468 Repeat 8 266 355.8 51 47.83 New Hermansky-Pudlak syndrome 6 protein C-terminal domain
Hpt PF01627 Family 229 24912 94.1 17 14.35 Changed Hpt domain
HPTransfase PF10090 Domain 58 1113 121.3 25 57.12 Changed Histidine phosphotransferase C-terminal domain
HpuA PF16960 Family 1 10 248.1 28 85.14 Changed Haemoglobin-haptoglobin utilisation, porphyrin transporter
HP_OMP PF01856 Family 27 308 158.6 19 60.67 Changed Helicobacter outer membrane protein
HP_OMP_2 PF02521 Domain 18 107 380.4 22 88.74 Changed Putative outer membrane protein
HR1 PF02185 Family 182 9284 66.1 31 14.49 Changed Hr1 repeat
HrcA PF01628 Family 581 5779 219.8 27 63.87 Changed HrcA protein C terminal domain
HrcA_DNA-bdg PF03444 Domain 13 1817 77 44 23.78 Changed Winged helix-turn-helix transcription repressor, HrcA DNA-binding
HRCT1 PF15758 Family 6 61 79.7 56 71.48 Changed Histidine-rich carboxyl terminus protein 1
HRDC PF00570 Domain 102 16452 67.1 26 10.19 Changed HRDC domain
HRG PF16954 Family 42 695 55.2 33 59.87 Changed Haem-transporter, endosomal/lysosomal, haem-responsive gene
HRI1 PF16815 Domain 58 653 225.9 26 77.37 Changed Protein HRI1
HRM PF02793 Family 126 12890 64.1 30 7.7 Changed Hormone receptor domain
HROB PF15072 Family 49 970 82.8 36 17.84 Changed Homologous recombination OB-fold protein
HrpA_pilin PF09589 Family 3 8 87.4 27 74.44 Changed HrpA pilus formation protein
HrpB1_HrpK PF09613 Repeat 13 88 126.3 24 67.86 Changed Bacterial type III secretion protein (HrpB1_HrpK)
HrpB2 PF09487 Family 8 50 114.8 27 83.44 Changed Bacterial type III secretion protein (HrpB2)
HrpB4 PF09502 Family 7 49 211 25 90.32 Changed Bacterial type III secretion protein (HrpB4)
HrpB7 PF09486 Coiled-coil 8 52 149 24 88.7 Changed Bacterial type III secretion protein (HrpB7)
HrpB_C PF08482 Family 221 3228 131.8 47 16.38 Changed ATP-dependent helicase C-terminal
HrpE PF06188 Family 4 97 170.7 17 82.43 Changed HrpE/YscL/FliH and V-type ATPase subunit E
HrpF PF06266 Family 5 35 74.3 41 99.66 Changed HrpF protein
HrpJ PF07201 Domain 34 199 163.6 18 44.81 Changed HrpJ-like domain
Hrs_helical PF12210 Domain 16 818 93.2 65 11.74 Changed Hepatocyte growth factor-regulated tyrosine kinase substrate
HRXXH PF13933 Domain 24 412 233.3 42 79.24 Changed Putative peptidase family
HR_lesion PF05514 Family 7 735 125.6 48 76.52 Changed HR-like lesion-inducing
Hs1pro-1_C PF07014 Family 10 297 235.2 55 54.61 Changed Hs1pro-1 protein C-terminus
Hs1pro-1_N PF07231 Family 9 280 166.3 48 39.21 Changed Hs1pro-1 N-terminus
HS1_rep PF02218 Repeat 68 6317 34.5 60 34.18 Changed Repeat in HS1/Cortactin
HSA PF07529 Family 150 6260 67.6 28 3.76 Changed HSA domain
hSac2 PF12456 Domain 73 2027 106.8 29 14.05 Changed Inositol phosphatase
HsbA PF12296 Family 224 1813 120.7 19 52.1 Changed Hydrophobic surface binding protein A
HSBP1 PF06825 Coiled-coil 56 1588 47.7 41 47.01 Changed Heat shock factor binding protein 1
HscB_4_cys PF18256 Domain 9 199 26.8 72 12.8 Changed Co-chaperone HscB tetracysteine metal binding motif
HSCB_C PF07743 Domain 273 2851 74.2 24 30.74 Changed HSCB C-terminal oligomerisation domain
HSD3 PF15244 Family 12 783 249.8 33 62.64 Changed Spermatogenesis-associated protein 7, or HSD3
HsdM_N PF12161 Domain 57 7622 133.6 19 24.39 Changed HsdM N-terminal domain
HSDR_N PF04313 Family 75 6368 186.1 18 18.97 Changed Type I restriction enzyme R protein N terminus (HSDR_N)
HSDR_N_2 PF13588 Domain 30 2983 108.8 22 25.22 Changed Type I restriction enzyme R protein N terminus (HSDR_N)
HSF_DNA-bind PF00447 Domain 357 11944 96 42 22.05 Changed HSF-type DNA-binding
hSH3 PF14603 Domain 15 1273 82.1 39 16.24 Changed Helically-extended SH3 domain
HSL_N PF06350 Family 25 855 264.6 39 37.22 Changed Hormone-sensitive lipase (HSL) N-terminus
HSM3_C PF18794 Repeat 4 60 172.6 24 35.83 Changed DNA mismatch repair protein HSM3, C terminal domain
HSM3_N PF18795 Repeat 31 138 182.3 23 44.04 Changed DNA mismatch repair protein HSM3, N terminal domain
HSNSD PF12062 Family 22 2189 372.3 67 49.28 Changed heparan sulfate-N-deacetylase
HSP20 PF00011 Domain 25 31174 97.4 22 53.6 Changed Hsp20/alpha crystallin family
HSP33 PF01430 Family 513 4849 277.1 29 91.87 Changed Hsp33 protein
HSP70 PF00012 Family 27 54379 407.8 29 80.76 Changed Hsp70 protein
HSP90 PF00183 Family 86 14351 373.7 31 65.19 Changed Hsp90 protein
HSP9_HSP12 PF04119 Family 83 630 58.4 44 56.21 Changed Heat shock protein 9/12
HSR PF03172 Domain 52 1278 96.9 42 16.7 Changed HSR domain
HSV_VP16_C PF12149 Domain 2 9 29.1 74 5.92 Changed Herpes simplex virus virion protein 16 C terminal
HtaA PF04213 Family 72 1218 157 29 46.37 Changed Htaa
HTHP PF11534 Family 13 257 71 55 88.64 Changed Hexameric tyrosine-coordinated heme protein (HTHP)
HTH_1 PF00126 Domain 1186 148323 59.8 33 20 Changed Bacterial regulatory helix-turn-helix protein, lysR family
HTH_10 PF04967 Domain 26 3193 52.7 39 15.04 Changed HTH DNA binding domain
HTH_11 PF08279 Domain 86 20299 54.8 28 17.22 Changed HTH domain
HTH_12 PF08461 Domain 9 928 64.4 30 10.2 Changed Ribonuclease R winged-helix domain
HTH_13 PF11972 Domain 7 353 54.3 43 15.97 Changed HTH DNA binding domain
HTH_15 PF12324 Domain 4 107 70.6 39 31.84 Changed Helix-turn-helix domain of alkylmercury lyase
HTH_16 PF12645 Domain 48 1085 59.4 29 71.48 Changed Helix-turn-helix domain
HTH_17 PF12728 Domain 185 24162 50.7 23 43.28 Changed Helix-turn-helix domain
HTH_18 PF12833 Domain 249 130034 79.8 26 22.37 Changed Helix-turn-helix domain
HTH_19 PF12844 Domain 25 4644 63.5 23 34.59 Changed Helix-turn-helix domain
HTH_20 PF12840 Domain 72 30495 61 29 37.3 Changed Helix-turn-helix domain
HTH_21 PF13276 Domain 171 11426 58.4 25 21.73 Changed HTH-like domain
HTH_22 PF13309 Domain 165 2016 62.6 30 29.83 Changed HTH domain
HTH_23 PF13384 Domain 162 8147 47 21 20.5 Changed Homeodomain-like domain
HTH_24 PF13412 Domain 279 42936 47 32 24.55 Changed Winged helix-turn-helix DNA-binding
HTH_25 PF13413 Domain 108 4673 61.7 32 19.55 Changed Helix-turn-helix domain
HTH_26 PF13443 Domain 84 10204 61.5 26 57.54 Changed Cro/C1-type HTH DNA-binding domain
HTH_27 PF13463 Domain 21 3144 65.4 23 36.07 Changed Winged helix DNA-binding domain
HTH_28 PF13518 Domain 75 5503 51.4 20 24.67 Changed Helix-turn-helix domain
HTH_29 PF13551 Domain 55 0 0 0 0 Changed Winged helix-turn helix
HTH_3 PF01381 Domain 175 85562 53.8 23 30.8 Changed Helix-turn-helix
HTH_30 PF13556 Domain 248 17577 58.5 30 13.27 Changed PucR C-terminal helix-turn-helix domain
HTH_31 PF13560 Domain 93 44357 65.5 25 24.34 Changed Helix-turn-helix domain
HTH_32 PF13565 Domain 306 4419 77.2 22 25.56 Changed Homeodomain-like domain
HTH_33 PF13592 Domain 103 2616 56.9 21 24.91 Changed Winged helix-turn helix
HTH_34 PF13601 Domain 18 2512 79.9 35 74.06 Changed Winged helix DNA-binding domain
HTH_35 PF13693 Domain 30 766 72 38 79.81 Changed Winged helix-turn-helix DNA-binding
HTH_36 PF13730 Domain 47 2392 54 23 22.83 Changed Helix-turn-helix domain
HTH_37 PF13744 Domain 22 1782 78.2 24 71.48 Changed Helix-turn-helix domain
HTH_38 PF13936 Domain 51 0 0 0 0 Changed Helix-turn-helix domain
HTH_39 PF14090 Domain 15 299 65.8 26 64.2 Changed Helix-turn-helix domain
HTH_40 PF14493 Domain 239 2706 90.5 24 12.39 Changed Helix-turn-helix domain
HTH_41 PF14502 Family 4 223 47.5 42 14.99 Changed Helix-turn-helix domain
HTH_42 PF06224 Family 71 6220 321.1 21 80.41 Changed Winged helix DNA-binding domain
HTH_43 PF09904 Family 17 226 89.5 48 91.68 Changed Winged helix-turn helix
HTH_44 PF14641 Domain 48 1593 123.7 31 8.1 Changed Helix-turn-helix DNA-binding domain of SPT6
HTH_45 PF14947 Domain 19 473 77.4 25 73.88 Changed Winged helix-turn-helix
HTH_46 PF15977 Family 13 144 68 38 32.54 Changed Winged helix-turn-helix DNA binding
HTH_47 PF16221 Domain 19 413 78.2 45 18.02 Changed winged helix-turn-helix
HTH_48 PF17906 Domain 75 3922 47.1 27 20.54 Changed HTH domain in Mos1 transposase
HTH_49 PF18010 Domain 1 67 29.1 64 16.07 Changed Cry35Ab1 HTH C-terminal domain
HTH_5 PF01022 Domain 37 24700 46.9 33 32.17 Changed Bacterial regulatory protein, arsR family
HTH_50 PF18024 Domain 5 1962 48.8 33 9.57 Changed Helix-turn-helix domain
HTH_51 PF18558 Domain 71 670 89.6 30 4.01 Changed Helix-turn-helix domain
HTH_52 PF18576 Domain 91 338 62.4 34 21.58 Changed Helix-turn-helix domain
HTH_53 PF18606 Domain 12 257 61.7 54 8.77 Changed Zap helix turn helix N-terminal domain
HTH_54 PF18607 Domain 9 55 90.9 52 23 Changed ParA helix turn helix domain
HTH_55 PF18622 Domain 3 58 103.7 80 16.79 Changed RctB helix turn helix domain
HTH_56 PF18662 Domain 32 111 106.5 19 14.35 Changed Cch helix turn helix domain
HTH_57 PF18679 Domain 4 25 106.6 28 17.04 Changed ThcOx helix turn helix domain
HTH_58 PF19575 Domain 1 894 67.1 61 78.04 Changed Helix-turn-helix domain
HTH_59 PF20038 Domain 14 183 60.7 28 55.63 Changed Helix-turn-helix domain
HTH_6 PF01418 Domain 9 12563 74.9 25 26.08 Changed Helix-turn-helix domain, rpiR family
HTH_60 PF20317 Domain 25 74 125.4 24 93.78 New Helix-turn-helix domain
HTH_61 PF20470 Domain 34 2044 95.8 29 6.92 New Helix-turn-helix domain
HTH_62 PF20552 Family 78 244 80.1 33 78.67 New Recombinase-like helix-turn-helix domain
HTH_63 PF20575 Family 38 131 142.8 26 80.48 New Helix-turn-helix domain
HTH_7 PF02796 Domain 14 4391 43.5 26 21.22 Changed Helix-turn-helix domain of resolvase
HTH_8 PF02954 Domain 50 37966 41.2 31 9.13 Changed Bacterial regulatory protein, Fis family
HTH_9 PF08221 Domain 17 1588 60.4 32 11.08 Changed RNA polymerase III subunit RPC82 helix-turn-helix domain
HTH_ABP1_N PF18107 Domain 13 402 57.7 35 14.64 Changed Fission yeast centromere protein N-terminal domain
HTH_AraC PF00165 Domain 52 756 37.1 31 18.04 Changed Bacterial regulatory helix-turn-helix proteins, AraC family
HTH_AsnC-type PF13404 Domain 181 0 0 0 0 Changed AsnC-type helix-turn-helix domain
HTH_CodY PF08222 Domain 2 1170 60.9 78 23.52 Changed CodY helix-turn-helix domain
HTH_Crp_2 PF13545 Domain 786 24882 72 24 30.47 Changed Crp-like helix-turn-helix domain
HTH_DeoR PF08220 Domain 15 18799 55.4 34 21.2 Changed DeoR-like helix-turn-helix domain
HTH_IclR PF09339 Domain 80 32736 51 26 19.47 Changed IclR helix-turn-helix domain
HTH_Mga PF08280 Domain 15 245 56.2 21 12.16 Changed M protein trans-acting positive regulator (MGA) HTH domain
HTH_micro PF17007 Family 7 31 334.4 21 56.27 Changed HTH-like
HTH_OrfB_IS605 PF12323 Family 99 5527 45.4 30 12.92 Changed Helix-turn-helix domain
HTH_PafC PF19187 Domain 52 1395 117.4 40 33.03 Changed PafC helix-turn-helix domain
HTH_ParB PF17762 Domain 187 8525 51.2 36 16.75 Changed HTH domain found in ParB protein
HTH_psq PF05225 Domain 14 5493 43.4 28 11.08 Changed helix-turn-helix, Psq domain
HTH_SUN2 PF18580 Domain 16 807 58.4 50 7.47 Changed SUN2 helix-turn-helix domain
HTH_Tnp_1 PF01527 Family 22 16824 75.5 20 58.06 Changed Transposase
HTH_Tnp_1_2 PF13022 Domain 6 171 116 18 80.96 Changed Helix-turn-helix of insertion element transposase
HTH_Tnp_2 PF20310 Family 3 301 116.8 35 62.55 New Transposon related HTH domain protein
HTH_Tnp_4 PF13613 Domain 70 3071 51.4 26 15.86 Changed Helix-turn-helix of DDE superfamily endonuclease
HTH_Tnp_IS1 PF12759 Domain 3 280 42.8 50 43.9 Changed InsA C-terminal domain
HTH_Tnp_IS630 PF01710 Domain 5 907 105.3 26 75.82 Changed Transposase
HTH_Tnp_ISL3 PF13542 Domain 134 1718 50.8 19 14.1 Changed Helix-turn-helix domain of transposase family ISL3
HTH_Tnp_Mu_1 PF02316 Family 4 389 108.7 22 23.41 Changed Mu DNA-binding domain
HTH_Tnp_Mu_2 PF09039 Domain 5 304 101.5 23 17.56 Changed Mu DNA binding, I gamma subdomain
HTH_Tnp_Tc3_1 PF11427 Family 2 610 47.2 30 22.96 Changed Tc3 transposase
HTH_Tnp_Tc3_2 PF01498 Family 24 7352 69.3 31 23.08 Changed Transposase
HTH_Tnp_Tc5 PF03221 Domain 151 9471 63.4 21 13.1 Changed Tc5 transposase DNA-binding domain
HTH_WhiA PF02650 Domain 269 3347 83.7 46 26.54 Changed WhiA C-terminal HTH domain
Htr2 PF17909 Domain 3 8 61.6 65 11.17 Changed Htr2 transmembrane domain
HtrL_YibB PF09612 Family 3 247 227.6 20 61.12 Changed Bacterial protein of unknown function (HtrL_YibB)
HTS PF04204 Family 51 2676 295.1 47 95.39 Changed Homoserine O-succinyltransferase
HU-CCDC81_bac_1 PF18174 Domain 63 742 57.5 37 17 Changed CCDC81-like prokaryotic HU domain 1
HU-CCDC81_bac_2 PF18175 Domain 158 641 69.5 29 20.42 Changed CCDC81-like prokaryotic HU domain 2
HU-CCDC81_euk_1 PF14908 Domain 32 466 83.7 32 14.45 Changed CCDC81 eukaryotic HU domain 1
HU-CCDC81_euk_2 PF18289 Domain 63 601 73.4 28 13.99 Changed CCDC81 eukaryotic HU domain 2
HU-DNA_bdg PF14848 Domain 12 207 120.8 22 49.68 Changed DNA-binding domain
HU-HIG PF18291 Domain 34 1410 122.6 21 76.22 Changed HU domain fused to wHTH, Ig, or Glycine-rich motif
Humanin PF15040 Family 7 60 23.7 70 95.83 Changed Humanin family
Hum_adeno_E3A PF05393 Family 1 7 85.7 28 53.43 Changed Human adenovirus early E3A glycoprotein
HUN PF08729 Domain 34 2377 50.8 44 5.91 Changed HPC2 and ubinuclein domain
HupE_UreJ PF04955 Family 40 1386 177.7 34 89.73 Changed HupE / UreJ protein
HupE_UreJ_2 PF13795 Family 38 2451 153.2 36 50.93 Changed HupE / UreJ protein
HupF_HypC PF01455 Family 361 2786 67.2 36 70.94 Changed HupF/HypC family
HupH_C PF04809 Family 45 585 111.7 29 74.52 Changed HupH hydrogenase expression protein, C-terminal conserved region
Hus1 PF04005 Family 26 1794 276 27 85.61 Changed Hus1-like protein
HutD PF05962 Family 42 1451 172.6 26 82.52 Changed HutD
HutP PF09021 Domain 57 445 129.6 35 88.79 Changed HutP
Hva1_TUDOR PF11160 Domain 177 2229 59.9 30 54.43 Changed Hypervirulence associated proteins TUDOR domain
HVO_2753_ZBP PF07754 Domain 9 230 44.5 53 74.86 Changed Small zinc finger protein HVO_2753-like, Zn-binding pocket
HVSL PF09749 Family 94 1709 215.4 27 76.42 Changed Uncharacterised conserved protein
HV_small_capsid PF17086 Family 2 22 73.9 46 90.13 Changed Small capsid protein of Herpesviridae
HWE_HK PF07536 Domain 32 4330 82.5 31 14.63 Changed HWE histidine kinase
HxlR PF01638 Domain 13 25206 89.6 32 65.1 Changed HxlR-like helix-turn-helix
HXXEE PF13787 Family 81 755 114.1 19 63.46 Changed Protein of unknown function with HXXEE motif
HXXSHH PF07586 Family 100 1597 299.8 25 67.7 Changed Protein of unknown function (DUF1552)
HyaE PF07449 Family 6 259 106.3 33 71.55 Changed Hydrogenase-1 expression protein HyaE
Hyaluronidase_1 PF07212 Repeat 1 53 244.9 58 75.71 Changed Hyaluronidase protein (HylP)
HycA_repressor PF11046 Family 4 52 137.6 56 95.08 Changed Transcriptional repressor of hyc and hyp operons
Hyccin PF09790 Repeat 24 1813 279.8 39 62.77 Changed Hyccin
HycH PF07450 Family 15 145 127 44 85.81 Changed Formate hydrogenlyase maturation protein HycH
HycI PF01750 Domain 18 2401 126.7 23 71.89 Changed Hydrogenase maturation protease
Hydantoinase_A PF01968 Family 29 10830 269.8 32 31.13 Changed Hydantoinase/oxoprolinase
Hydantoinase_B PF02538 Family 351 8315 497.5 33 57.42 Changed Hydantoinase B/oxoprolinase
Hydant_A_C PF19278 Domain 41 6773 175.3 20 18.58 Changed Hydantoinase/oxoprolinase C-terminal domain
Hydant_A_N PF05378 Family 37 10298 182.3 30 20.5 Changed Hydantoinase/oxoprolinase N-terminal region
HydF_dimer PF18128 Domain 10 882 98.8 54 24.38 Changed Hydrogen maturase F dimerization domain
HydF_tetramer PF18133 Domain 21 907 117 46 28.69 Changed Hydrogen maturase F tetramerization domain
Hydin_ADK PF17213 Domain 14 343 157.6 35 4.62 Changed Hydin Adenylate kinase-like domain
Hydrolase PF00702 Domain 227 77747 238.8 21 28.75 Changed haloacid dehalogenase-like hydrolase
Hydrolase_2 PF07486 Family 381 5520 105 31 40.86 Changed Cell Wall Hydrolase
Hydrolase_3 PF08282 Domain 62 29841 177.4 20 42.14 Changed haloacid dehalogenase-like hydrolase
Hydrolase_4 PF12146 Family 75 46085 190.3 16 57.34 Changed Serine aminopeptidase, S33
Hydrolase_6 PF13344 Domain 122 13521 103 25 31.89 Changed Haloacid dehalogenase-like hydrolase
Hydrolase_like PF13242 Domain 129 19507 74.9 25 25.25 Changed HAD-hyrolase-like
Hydrophobin PF01185 Family 195 2594 79.6 35 59.03 Changed Fungal hydrophobin
Hydrophobin_2 PF06766 Family 85 647 63.5 44 46.79 Changed Fungal hydrophobin
Hydrophob_seed PF14547 Domain 12 3438 82.7 51 49.26 Changed Hydrophobic seed protein
Hyd_WA PF06462 Repeat 162 2480 30.4 37 6.02 Changed Propeller
HYLS1_C PF15311 Family 17 460 78.9 41 24.91 Changed Hydrolethalus syndrome protein 1 C-terminus
HypA PF01155 Domain 405 2488 110.9 30 93.69 Changed Hydrogenase/urease nickel incorporation, metallochaperone, hypA
HypD PF01924 Family 276 2150 345.6 46 94.59 Changed Hydrogenase formation hypA family
HypF_C PF17788 Domain 147 2078 99.8 37 13.26 Changed HypF Kae1-like domain
Hyphal_reg_CWP PF11765 Domain 71 384 299 24 35.08 Changed Hyphally regulated cell wall protein N-terminal
HYPK_UBA PF19026 Domain 37 4263 40.4 46 12.76 Changed HYPK UBA domain
Hypoth_Ymh PF09509 Family 38 503 118.1 27 45.25 Changed Protein of unknown function (Hypoth_ymh)
HYR PF02494 Domain 13 12005 80.9 33 18.46 Changed HYR domain
Hyr1 PF15789 Repeat 17 1150 42.5 51 41.81 Changed Hyphally regulated cell wall GPI-anchored protein 1
HZS_alpha PF18582 Domain 13 312 94.4 31 9.88 Changed Hydrazine synthase alpha subunit middle domain
H_lectin PF09458 Domain 162 1383 66.3 26 24.28 Changed H-type lectin domain
H_PPase PF03030 Family 275 5979 626.2 44 91.75 Changed Inorganic H+ pyrophosphatase
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