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Powering down the Pfam website
On October 5th, we began redirecting traffic from Pfam (pfam.xfam.org) to InterPro (www.ebi.ac.uk/interpro). The Pfam website will remain available at pfam-legacy.xfam.org until January 2023, when it will be decommissioned. You can read more about the sunset period in our blog post.

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Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
P-II PF00543 Domain 75 11393 107.3 47 81.09 Changed Nitrogen regulatory protein P-II
P-loop_TraG PF19044 Family 92 4248 257.6 19 36.92 Changed TraG P-loop domain
P-mevalo_kinase PF04275 Family 40 753 110.2 38 23.26 Changed Phosphomevalonate kinase
P120R PF08062 Repeat 6 145 21.8 50 5.83 Changed P120R (NUC006) repeat
p12I PF12233 Family 1 2 99 93 100 Changed Human adult T cell leukemia/lymphoma virus protein
P16-Arc PF04699 Domain 119 1973 142 37 84.31 Changed ARP2/3 complex 16 kDa subunit (p16-Arc)
P19Arf_N PF07392 Family 7 50 50.4 63 34.53 Changed Cyclin-dependent kinase inhibitor 2a p19Arf N-terminus
P1_N PF12378 Domain 8 16 286.2 24 41.89 Changed Mycoplasma adhesin P1, N-terminal
P2 PF07194 Domain 196 1393 81.2 28 11.96 Changed P2 response regulator binding domain
P21-Arc PF04062 Family 86 1788 164.8 48 88.74 Changed ARP2/3 complex ARPC3 (21 kDa) subunit
P22_AR_C PF10548 Domain 7 103 71 32 30 Changed P22AR C-terminal domain
P22_AR_N PF10547 Domain 22 276 110.5 33 45.75 Changed P22_AR N-terminal domain
P22_CoatProtein PF11651 Family 7 466 274.2 20 87.2 Changed P22 coat protein - gene protein 5
P22_Cro PF14549 Domain 9 154 56.8 31 67.42 Changed DNA-binding transcriptional regulator Cro
P22_portal PF16510 Family 3 153 566.5 26 84.28 Changed Phage P22-like portal protein
P22_Tail-4 PF11650 Family 4 69 151.6 37 93.43 Changed P22 tail accessory factor
p25-alpha PF05517 Domain 62 1741 135.3 37 55.42 Changed p25-alpha
P2RX7_C PF20478 Domain 53 713 155.8 28 43.99 New P2X purinoreceptor 7 intracellular domain
P2X_receptor PF00864 Family 65 3704 279.2 39 80.26 Changed ATP P2X receptor
P2_N PF18628 Domain 18 80 128.9 24 48.49 Changed Viral coat protein P2 N-terminal domain
P2_Phage_GpR PF06891 Family 34 345 128.2 30 82.8 Changed P2 phage tail completion protein R (GpR)
P30 PF07390 Family 4 11 146.5 22 60.47 Changed Mycoplasma P30 protein
p31comet PF06581 Family 4 425 225 39 81.24 Changed Mad1 and Cdc20-bound-Mad2 binding
P33MONOX PF15302 Family 13 491 243.5 55 92.62 Changed P33 mono-oxygenase
P34-Arc PF04045 Family 80 2218 215.7 41 67.68 Changed Arp2/3 complex, 34 kD subunit p34-Arc
P35 PF02331 Domain 1 9 237.3 24 58.52 Changed Apoptosis preventing protein
P3A PF08727 Domain 2 6 55.7 47 3.12 Changed Poliovirus 3A protein like
p450 PF00067 Domain 50 213489 340.7 17 78.98 Changed Cytochrome P450
p47_phox_C PF08944 Disordered 15 347 32.4 59 8.02 Changed NADPH oxidase subunit p47Phox, C terminal domain
P4Ha_N PF08336 Family 164 3127 126.6 39 25.11 Changed Prolyl 4-Hydroxylase alpha-subunit, N-terminal region
P5-ATPase PF12409 Family 139 2990 123.8 24 10.44 Changed P5-type ATPase cation transporter
P53 PF00870 Domain 40 2294 183.8 62 36.82 Changed P53 DNA-binding domain
p53-inducible11 PF14936 Family 5 490 145.8 60 79.29 Changed Tumour protein p53-inducible protein 11
P53_C PF11619 Family 4 29 66.7 55 15.46 Changed Transcription factor P53 - C terminal domain
P53_TAD PF08563 Motif 20 295 24.3 58 6.47 Changed P53 transactivation motif
P53_tetramer PF07710 Motif 17 1820 41.1 60 7.76 Changed P53 tetramerisation motif
P5CR_dimer PF14748 Domain 894 12141 103.7 37 37.13 Changed Pyrroline-5-carboxylate reductase dimerisation
p6 PF17548 Family 1 10 75.7 45 77.17 Changed Histone-like Protein p6
P63C PF10546 Domain 11 204 89.6 30 30.02 Changed P63C domain
P66_CC PF16563 Coiled-coil 13 1173 44 65 6.96 Changed Coiled-coil and interaction region of P66A and P66B with MBD2
P68HR PF08061 Repeat 2 519 33.7 57 11.13 Changed P68HR (NUC004) repeat
PA PF02225 Family 339 25301 96.6 18 14.22 Changed PA domain
PA-IIL PF07472 Family 18 35 105.2 33 50.79 Changed Fucose-binding lectin II (PA-IIL)
PA-IL PF07828 Family 2 30 116 33 57.33 Changed PA-IL-like protein
PA14 PF07691 Domain 22 7506 132.8 15 13.19 Changed PA14 domain
PA26 PF04636 Family 31 1954 363.6 48 85.5 Changed PA26 p53-induced protein (sestrin)
PA28_alpha PF02251 Family 38 1455 56.7 40 22.35 Changed Proteasome activator pa28 alpha subunit
PA28_beta PF02252 Family 55 1938 132.1 44 52.78 Changed Proteasome activator pa28 beta subunit
PaaA_PaaC PF05138 Domain 60 4569 272.4 32 93.32 Changed Phenylacetic acid catabolic protein
PaaB PF06243 Family 40 2226 88.2 53 86.59 Changed Phenylacetic acid degradation B
PAAR_motif PF05488 Motif 131 2749 69.7 29 35.51 Changed PAAR motif
PAAT-like PF14958 Family 27 449 123.6 36 33.03 Changed ATPase PAAT-like
PaaX PF07848 Family 11 2314 68.4 31 24.45 Changed PaaX-like protein
PaaX_C PF08223 Family 20 2445 94.4 27 33.83 Changed PaaX-like protein C-terminal domain
Pab87_oct PF13969 Domain 10 35 93.8 31 21.75 Changed Pab87 octamerisation domain
PABP PF00658 Family 125 5915 65 51 7.15 Changed Poly-adenylate binding protein, unique domain
PAC1 PF16094 Family 13 601 212.6 33 82.31 Changed Proteasome assembly chaperone 4
PAC2 PF09754 Family 338 4552 214.7 22 73.94 Changed PAC2 family
PAC3 PF10178 Family 35 981 89.7 29 56.6 Changed Proteasome assembly chaperone 3
PAC4 PF16093 Family 109 1278 77.6 28 44.39 Changed Proteasome assembly chaperone 4
Pacifastin_I PF05375 Family 36 1180 37.9 35 13.78 Changed Pacifastin inhibitor (LCMII)
Packaging_FI PF14000 Family 3 52 119.1 56 75.13 Changed DNA packaging protein FI
Pacs-1 PF10254 Family 26 2141 327.9 51 46.89 Changed PACS-1 cytosolic sorting protein
PACT_coil_coil PF10495 Domain 80 1860 80.1 44 3.09 Changed Pericentrin-AKAP-450 domain of centrosomal targeting protein
PAD PF03068 Family 53 1659 329.1 45 59.47 Changed Protein-arginine deiminase (PAD)
pAdhesive_10 PF20592 Family 24 32 161.6 36 9.11 New Putative adhesin domain (group 10)
pAdhesive_11 PF20596 Family 12 15 109 20 6.99 New Putative adhesive domain (group 11)
pAdhesive_15 PF20597 Domain 267 961 260.4 18 41.53 New Putative Ice-binding-like adhesive domain
pAdhesive_17 PF20609 Domain 32 47 263.7 24 32.93 New Putative adhesive domain (group 17)
pAdhesive_6 PF20595 Family 17 19 164.4 30 10.08 New Putative adhesive domain (group 6)
pAdhesive_8 PF20602 Domain 7 7 139.7 28 6.49 New Putative adhesive domain (group 8)
PadR PF03551 Domain 29 23409 73.5 28 47.15 Changed Transcriptional regulator PadR-like family
PADR1 PF08063 Domain 75 1191 52 45 5.95 Changed PADR1 (NUC008) domain
PADRE PF14009 Domain 176 5895 174.6 18 88.44 Changed PADRE domain
PAD_M PF08527 Domain 66 1080 150.5 45 24.65 Changed Protein-arginine deiminase (PAD) middle domain
PAD_N PF08526 Domain 47 945 104 35 16.46 Changed Protein-arginine deiminase (PAD) N-terminal domain
PAD_porph PF04371 Family 359 4271 322.6 32 92.05 Changed Porphyromonas-type peptidyl-arginine deiminase
PAE PF03283 Family 52 4662 261.4 32 72.29 Changed Pectinacetylesterase
PAF PF15715 Domain 13 381 105 49 90.83 Changed PCNA-associated factor histone like domain
PAF-AH_p_II PF03403 Domain 7 5635 211.5 16 59.29 Changed Platelet-activating factor acetylhydrolase, isoform II
Paf1 PF03985 Family 37 1916 377 26 75.89 Changed Paf1
Paf67 PF10255 Repeat 60 2012 357.7 48 73.18 Changed RNA polymerase I-associated factor PAF67
PAG PF15347 Family 11 299 377.2 48 95.82 Changed Phosphoprotein associated with glycosphingolipid-enriched
PAGK PF15284 Family 2 4 65.5 61 93.91 Changed Phage-encoded virulence factor
PagL PF09411 Family 96 1976 138.3 16 55.11 Changed Lipid A 3-O-deacylase (PagL)
PagP PF07017 Family 19 254 140.4 45 67.41 Changed Antimicrobial peptide resistance and lipid A acylation protein PagP
PAH PF02671 Repeat 348 10284 46.9 38 8.9 Changed Paired amphipathic helix repeat
Paired_CXXCH_1 PF09699 Domain 150 2930 43.4 28 17.99 Changed Doubled CXXCH motif (Paired_CXXCH_1)
Pal1 PF08316 Family 57 1108 110.4 34 24.99 Changed Pal1 cell morphology protein
PALB2_WD40 PF16756 Repeat 4 398 283 53 29.5 Changed Partner and localizer of BRCA2 WD40 domain
PalH PF08733 Family 76 567 351.8 40 50.04 Changed PalH/RIM21
Pallilysin PF18663 Domain 12 31 116.7 31 23.04 Changed Pallilysin beta barrel domain
Palm_thioest PF02089 Domain 60 4123 209.9 26 70.14 Changed Palmitoyl protein thioesterase
PALP PF00291 Family 145 73067 295.7 22 75.21 Changed Pyridoxal-phosphate dependent enzyme
Pam16 PF03656 Family 3 2051 117.9 36 63.09 Changed Pam16
Pam17 PF08566 Family 70 771 161 39 69.19 Changed Mitochondrial import protein Pam17
PAM2 PF07145 Motif 34 5647 17.4 53 3.03 Changed Ataxin-2 C-terminal region
Pan3_PK PF18101 Domain 85 1834 132.7 55 19.72 Changed Pan3 Pseudokinase domain
Pannexin_like PF12534 Family 40 1682 312 48 42.28 Changed Pannexin-like TM region of LRRC8
Pantoate_ligase PF02569 Family 661 7618 276.7 40 92.69 Changed Pantoate-beta-alanine ligase
Pantoate_transf PF02548 Family 643 8254 250 44 87.92 Changed Ketopantoate hydroxymethyltransferase
PanZ PF12568 Domain 6 240 121.2 30 87.07 Changed Acetyltransferase (GNAT) domain, PanZ
PAN_1 PF00024 Domain 86 11531 80.1 16 18.03 Changed PAN domain
PAN_2 PF08276 Domain 36 12970 66.8 31 9.34 Changed PAN-like domain
PAN_3 PF08277 Domain 35 667 68.6 21 22.22 Changed PAN-like domain
PAN_4 PF14295 Domain 34 5691 47.1 21 14.96 Changed PAN domain
Pan_kinase PF03309 Family 126 6260 200.1 31 77.71 Changed Type III pantothenate kinase
PaO PF08417 Family 67 1503 94.5 27 18.58 Changed Pheophorbide a oxygenase
PAP1 PF08601 Family 11 1012 192.8 24 45.89 Changed Transcription factor PAP1
PAP2 PF01569 Family 66 36601 131.4 20 42.36 Changed PAP2 superfamily
PAP2_3 PF14378 Family 43 5527 172 20 49.89 Changed PAP2 superfamily
PAP2_C PF14360 Domain 40 3106 72.3 38 19.03 Changed PAP2 superfamily C-terminal
PAPA-1 PF04795 Family 79 1537 83.6 33 19.62 Changed PAPA-1-like conserved region
PapA_C PF16911 Family 29 163 116.2 24 27.9 Changed Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus
PapB PF03333 Family 14 16 79.6 31 80.52 Changed Adhesin biosynthesis transcription regulatory protein
PapC_C PF13953 Domain 106 1266 64.4 27 8.12 Changed PapC C-terminal domain
PapC_N PF13954 Domain 125 1048 141.2 27 17.96 Changed PapC N-terminal domain
PapD-like PF14874 Domain 5 845 95.9 21 5.16 Changed Flagellar-associated PapD-like
PapD_C PF02753 Domain 116 1169 62 26 26.06 Changed Pili assembly chaperone PapD, C-terminal domain
PapD_N PF00345 Domain 74 1997 121.4 25 50.54 Changed Pili and flagellar-assembly chaperone, PapD N-terminal domain
PapG_C PF03628 Domain 3 2 93.5 11 25.94 Changed PapG chaperone-binding domain
PapG_N PF03627 Domain 4 0 0 0 0 Changed PapG carbohydrate binding domain
Papilin_u7 PF16626 Disordered 15 168 89.5 65 7.38 Changed Linking region between Kunitz_BPTI and I-set on papilin
Papilloma_E5 PF03025 Family 13 17 73.2 39 92.02 Changed Papillomavirus E5
Papilloma_E5A PF05776 Family 5 4 91 63 99.18 Changed Papillomavirus E5A protein
PapJ PF14855 Domain 3 0 0 0 0 Changed Pilus-assembly fibrillin subunit, chaperone
Papo_T_antigen PF02380 Family 10 91 89.8 30 40.41 Changed T-antigen specific domain
PAPS_reduct PF01507 Family 27 16149 182.1 25 61.14 Changed Phosphoadenosine phosphosulfate reductase family
PAP_assoc PF03828 Family 77 8780 59.7 31 8.28 Changed Cid1 family poly A polymerase
PAP_central PF04928 Domain 96 4911 302.7 42 48.07 Changed Poly(A) polymerase central domain
Pap_E4 PF02711 Family 40 36 94.8 36 87.33 Changed E4 protein
PAP_fibrillin PF04755 Family 12 3421 166.3 23 58.43 Changed PAP_fibrillin
PAP_PilO PF06864 Family 6 177 344.2 16 82.21 Changed Pilin accessory protein (PilO)
PAP_RNA-bind PF04926 Domain 100 5106 92 25 18.92 Changed Poly(A) polymerase predicted RNA binding domain
PAR1 PF06521 Family 15 651 150.4 52 79.73 Changed PAR1 protein
Par3_HAL_N_term PF12053 Family 11 2426 75.6 48 7.12 Changed N-terminal of Par3 and HAL proteins
ParA PF10609 Family 137 17062 228.1 35 68.48 Changed NUBPL iron-transfer P-loop NTPase
Paralemmin PF03285 Family 21 2251 216.5 25 50.08 Changed Paralemmin
Paramecium_SA PF01508 Domain 74 1520 63.1 26 45.13 Changed Paramecium surface antigen domain
Paramyxo_C PF01692 Family 1 4 200 64 94.79 Changed Paramyxovirus non-structural protein C
Paramyxo_ncap PF00973 Family 9 71 457 29 89.34 Changed Paramyxovirus nucleocapsid protein
Paramyxo_NS_C PF02725 Family 1 10 146.2 47 62.05 Changed Non-structural protein C
Paramyxo_P PF01806 Domain 1 5 248 56 42.73 Changed Paramyxovirinae P phosphoprotein C-terminal region
Paramyxo_PNT PF14320 Domain 1 6 309 70 57.45 Changed Phosphoprotein P region PNT disordered
Paramyxo_P_V_N PF13825 Family 8 22 219.4 28 42.57 Changed Paramyxovirus structural protein V/P N-terminus
Paramyx_P_V_C PF03210 Family 4 62 162.8 23 35.64 Changed Paramyxovirus P/V phosphoprotein C-terminal
Parathyroid PF01279 Family 14 721 89.9 37 57.16 Changed Parathyroid hormone family
ParB PF08775 Domain 8 66 120.9 34 37.48 Changed ParB family
ParBc PF02195 Family 33 20533 91.2 27 26.64 Changed ParB/Sulfiredoxin domain
ParBc_2 PF08857 Domain 44 395 170.2 33 59.24 Changed Putative ParB-like nuclease
ParB_C PF18064 Domain 4 96 46.9 37 42.26 Changed Centromere-binding protein ParB C-terminal
ParcG PF10274 Repeat 20 1504 151.8 39 34.13 Changed Parkin co-regulated protein
ParD PF09386 Domain 16 143 73.3 39 87.27 Changed Antitoxin ParD
Pardaxin PF07425 Family 3 0 0 0 0 Changed Pardaxin
ParD_antitoxin PF03693 Domain 4 2779 76.1 26 82.6 Changed Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH
ParD_like PF11903 Domain 15 875 73.8 31 80.68 Changed ParD-like antitoxin of type II bacterial toxin-antitoxin system
ParE-like_toxin PF15781 Domain 16 319 85.1 36 89.73 Changed ParE-like toxin of type II bacterial toxin-antitoxin system
Parecho_VpG PF06344 Family 1 1 20 100 0.92 Changed Parechovirus Genome-linked protein
PaREP1 PF05942 Family 67 329 109.9 24 70.58 Changed Archaeal PaREP1/PaREP8 family
PaRep2a PF07903 Family 6 34 79.7 54 71.95 Changed PaRep2a protein
PaRep2b PF07775 Family 13 46 239.8 27 64.11 Changed PaRep2b protein
ParE_toxin PF05016 Domain 157 11625 86.6 17 88.28 Changed ParE toxin of type II toxin-antitoxin system, parDE
ParG PF09274 Domain 3 162 57.6 21 69.06 Changed ParG
PARG_cat PF05028 Family 70 2126 279.2 32 47.95 Changed Poly (ADP-ribose) glycohydrolase (PARG)
PARM PF17061 Family 14 240 217.8 54 89.19 Changed PARM
PARP PF00644 Family 27 12749 169.6 21 21.45 Changed Poly(ADP-ribose) polymerase catalytic domain
PARP_reg PF02877 Domain 155 3275 130.9 33 16.98 Changed Poly(ADP-ribose) polymerase, regulatory domain
PARP_regulatory PF01358 Domain 9 122 249.9 29 59.54 Changed Poly A polymerase regulatory subunit
partial_CstF PF15861 Domain 8 61 61.1 47 7.81 Changed Partial cleavage stimulation factor domain
Parvo_coat PF00740 Family 4 17 408.4 24 67.37 Changed Parvovirus coat protein VP2
Parvo_NS1 PF01057 Domain 24 175 172.3 18 41.2 Changed Parvovirus non-structural protein NS1
PAS PF00989 Domain 49 58225 104 15 15.26 Changed PAS fold
PASTA PF03793 Domain 225 24594 62.3 24 22.27 Changed PASTA domain
PAS_10 PF13596 Domain 40 2777 106 24 12.01 Changed PAS domain
PAS_11 PF14598 Domain 15 7663 108.1 32 12.55 Changed PAS domain
PAS_12 PF18095 Domain 6 15 134.2 32 34.17 Changed UPF0242 C-terminal PAS-like domain
PAS_2 PF08446 Domain 24 3281 108 26 11.22 Changed PAS fold
PAS_3 PF08447 Domain 119 57710 86.9 18 13.56 Changed PAS fold
PAS_4 PF08448 Domain 49 58162 109.7 16 17.65 Changed PAS fold
PAS_5 PF07310 Domain 9 1337 134.5 23 67.55 Changed PAS domain
PAS_6 PF08348 Domain 162 1657 112.1 32 49.04 Changed YheO-like PAS domain
PAS_7 PF12860 Domain 71 8171 113.9 22 17.38 Changed PAS fold
PAS_8 PF13188 Domain 226 16764 67.7 15 9.71 Changed PAS domain
PAS_9 PF13426 Domain 118 38837 104.7 20 15.02 Changed PAS domain
Pas_Saposin PF09016 Domain 4 16 75.2 61 99.18 Changed Pas factor saposin fold
PAT1 PF09770 Repeat 36 1695 449.5 22 67.93 Changed Topoisomerase II-associated protein PAT1
Patatin PF01734 Family 108 33307 186 19 33.31 Changed Patatin-like phospholipase
Patched PF02460 Family 8 11184 387.8 15 47.2 Changed Patched family
PatG_C PF18065 Domain 10 136 115.2 36 20.21 Changed PatG C-terminal
PatG_D PF18047 Domain 10 123 144 30 24.45 Changed PatG Domain
Pathogen_betaC1 PF09593 Domain 36 41 114.9 36 94.75 Changed Beta-satellite pathogenicity beta C1 protein
pATOM36 PF19224 Family 3 17 249.2 43 86.5 Changed pATOM36 family
PATR PF12951 Repeat 675 11201 30 43 9.05 Changed Passenger-associated-transport-repeat
PAW PF04721 Domain 35 747 179.7 40 30.95 Changed PNGase C-terminal domain, mannose-binding module PAW
PAX PF00292 Domain 4 7364 119.3 67 30.02 Changed 'Paired box' domain
Pax2_C PF12403 Family 16 1740 104.3 56 26.13 Changed Paired-box protein 2 C terminal
Pax7 PF12360 Family 11 1122 43.7 67 9.18 Changed Paired box protein 7
Paxillin PF03535 Family 12 977 168.5 45 27.76 Changed Paxillin family
PAXIP1_C PF15364 Family 9 365 127.7 43 48 Changed PAXIP1-associated-protein-1 C term PTIP binding protein
PAXNEB PF05625 Domain 67 1969 314.1 28 83.19 Changed PAXNEB protein
PAXX PF15384 Family 8 313 164.7 41 81.67 Changed PAXX, PAralog of XRCC4 and XLF, also called C9orf142
PAZ PF02170 Domain 211 12978 130.5 25 13.13 Changed PAZ domain
PAZ_2 PF12212 Domain 1 2 114 23 19.62 Changed PAZ domain
PAZ_3 PF18309 Domain 7 15 91.8 33 13.2 Changed Argonaute PAZ domain
PAZ_4 PF18349 Domain 1 1 93 100 13.17 Changed PAZ domain
PA_decarbox PF05870 Domain 16 527 143.5 36 82.15 Changed Phenolic acid decarboxylase (PAD)
PB1 PF00564 Domain 46 17052 84.3 18 12.88 Changed PB1 domain
PB1-F2 PF11986 Domain 2 14 82.7 72 97.23 Changed Influenza A Proapoptotic protein
PBAN PF05874 Family 1 25 138 36 60.26 Changed Pheromone biosynthesis activating neuropeptide (PBAN)
PBC PF03792 Family 15 2829 165 78 47.13 Changed PBC domain
PBCV_basic_adap PF08789 Domain 9 120 34.9 42 18.79 Changed PBCV-specific basic adaptor domain
PBD PF00786 Domain 29 10959 52.8 31 10.91 Changed P21-Rho-binding domain
PBECR1 PF18809 Domain 15 103 96.9 30 9.28 Changed phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease1
PBECR2 PF18810 Domain 71 202 124.2 18 26.3 Changed phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease2
PBECR3 PF18812 Domain 83 207 110.6 18 21.39 Changed phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3
PBECR4 PF18813 Domain 44 186 163.7 15 64.69 Changed phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease4
PBECR5 PF18814 Domain 6 14 232.2 26 10.68 Changed phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5
PBP PF01161 Domain 271 11812 141.2 21 60.24 Changed Phosphatidylethanolamine-binding protein
PBP-Tp47_a PF14889 Domain 14 28 156.9 46 17.64 Changed Penicillin-binding protein Tp47 domain a
PBP-Tp47_c PF14888 Domain 12 27 158.3 55 17.19 Changed Penicillin-binding protein Tp47 domain C
PBP1_TM PF14812 Family 12 128 78.8 45 10.09 Changed Transmembrane domain of transglycosylase PBP1 at N-terminal
PBP3 PF18056 Domain 9 86 108.4 29 15.35 Changed Penicillin Binding Protein 3 Domain
PBP5_C PF07943 Domain 61 6055 91.9 22 22.89 Changed Penicillin-binding protein 5, C-terminal domain
PBP_dimer PF03717 Domain 65 16689 173.7 22 26.68 Changed Penicillin-binding Protein dimerisation domain
PBP_GOBP PF01395 Domain 201 3164 109.9 15 65 Changed PBP/GOBP family
PBP_like PF12727 Family 121 2107 190.5 28 45.48 Changed PBP superfamily domain
PBP_like_2 PF12849 Family 63 14193 262.7 19 74.4 Changed PBP superfamily domain
PBP_N PF17093 Family 1 6 131.3 53 17.94 Changed Penicillin-binding protein N-terminus
PBP_sp32 PF07222 Family 2 279 172.3 46 43.67 Changed Proacrosin binding protein sp32
PBSX_XtrA PF17356 Family 13 92 64.4 40 93.32 Changed Phage-like element PBSX protein XtrA
PBS_linker_poly PF00427 Family 196 1393 125.6 40 45.19 Changed Phycobilisome Linker polypeptide
PC-Esterase PF13839 Family 182 11935 243.1 29 62.33 Changed GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
PC4 PF02229 Domain 156 2861 51.2 36 34.67 Changed Transcriptional Coactivator p15 (PC4)
PCAF_N PF06466 Domain 26 1257 217.9 60 30.23 Changed PCAF (P300/CBP-associated factor) N-terminal domain
PCB_OB PF17092 Family 223 2924 112.4 24 13.76 Changed Penicillin-binding protein OB-like domain
PCC PF03479 Domain 341 7461 113.4 34 41.15 Changed Plants and Prokaryotes Conserved (PCC) domain
Pcc1 PF09341 Family 190 1773 76.7 28 56.15 Changed Transcription factor Pcc1
PCC_BT PF18140 Domain 59 2197 123.7 26 17.86 Changed Propionyl-coenzyme A carboxylase BT domain
PCDO_beta_N PF12391 Family 58 1433 33.6 37 13.62 Changed Protocatechuate 3,4-dioxygenase beta subunit N terminal
PCEMA1 PF07418 Family 1 6 168 22 46.13 Changed Acidic phosphoprotein precursor PCEMA1
PcF PF09461 Domain 7 37 42.6 41 28.57 Changed Phytotoxin PcF protein
PcfJ PF14284 Family 27 726 143.1 22 30.32 Changed PcfJ-like protein
PcfK PF14058 Family 15 354 130.8 30 79.18 Changed PcfK-like protein
PCI PF01399 Domain 70 26356 109.6 17 21.5 Changed PCI domain
PCIF1_WW PF12237 Family 27 752 170.1 50 25.44 Changed Phosphorylated CTD interacting factor 1 WW domain
PCLP PF19307 Domain 133 1406 246.2 59 59.23 Changed Phage capsid-like protein
PCM1_C PF15717 Family 13 1392 478.3 58 28.85 Changed Pericentriolar material 1 C terminus
PCMD PF13201 Domain 80 542 244 23 53.66 Changed Putative carbohydrate metabolism domain
PCMT PF01135 Family 9 13318 188.6 27 66.36 Changed Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
PCNA_C PF02747 Domain 6 2638 115.9 38 41.55 Changed Proliferating cell nuclear antigen, C-terminal domain
PCNA_N PF00705 Domain 7 2532 119 39 39.45 Changed Proliferating cell nuclear antigen, N-terminal domain
PCNP PF15473 Family 10 619 130.4 52 73.39 Changed PEST, proteolytic signal-containing nuclear protein family
PCO_ADO PF07847 Family 20 2280 188.9 35 71.41 Changed PCO_ADO
PCP PF02429 Domain 9 26 124 56 16.96 Changed Peridinin-chlorophyll A binding protein
PCP_red PF08369 Family 122 1162 46.7 40 11.39 Changed Proto-chlorophyllide reductase 57 kD subunit
PcrB PF01884 Domain 4 1254 228 32 94.6 Changed PcrB family
PCRF PF03462 Domain 868 18927 185.2 35 51.15 Changed PCRF domain
PCSK9_C1 PF18459 Domain 11 258 82.1 54 12.27 Changed Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain
PCSK9_C2 PF18464 Domain 15 158 63.9 44 9.56 Changed Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain
PCSK9_C3 PF18463 Domain 20 238 75.5 49 11.29 Changed Proprotein convertase subtilisin-like/kexin type 9 C-terminal domain
PCuAC PF04314 Family 303 4175 111 30 63.78 Changed Copper chaperone PCu(A)C
PCYCGC PF13798 Family 8 325 133.6 34 87.15 Changed Protein of unknown function with PCYCGC motif
PC_rep PF01851 Repeat 118 7450 34.7 28 6.84 Changed Proteasome/cyclosome repeat
PD-C2-AF1 PF09310 Domain 4 344 224.4 54 85.47 Changed POU domain, class 2, associating factor 1
PD40 PF07676 Repeat 87 56921 34.4 25 13.36 Changed WD40-like Beta Propeller Repeat
PdaC PF13739 Domain 63 1497 97.1 18 34.47 Changed Deacetylase PdaC
Pdase_C33_assoc PF14756 Domain 4 3 144 49 4.16 Changed Peptidase_C33-associated domain
Pdase_M17_N2 PF18295 Domain 10 608 116.1 43 22.91 Changed M17 aminopeptidase N-terminal domain 2
PDCD2_C PF04194 Domain 185 2573 114.1 34 28.27 Changed Programmed cell death protein 2, C-terminal putative domain
PDCD7 PF16021 Family 14 700 240.7 31 58.66 Changed Programmed cell death protein 7
PDCD9 PF07147 Family 21 1004 266.3 25 63.01 Changed Mitochondrial 28S ribosomal protein S30 (PDCD9)
PDDEXK_1 PF12705 Domain 93 17049 237 14 26.31 Changed PD-(D/E)XK nuclease superfamily
PDDEXK_10 PF07788 Family 14 150 69.4 38 27.28 Changed PD-(D/E)XK nuclease superfamily
PDDEXK_11 PF20472 Domain 18 101 133.4 25 85.38 New PD-(D/E)XK nuclease superfamily domain
PDDEXK_12 PF20516 Domain 152 1199 224.3 20 58.1 New PD-(D/E)XK nuclease superfamily
PDDEXK_2 PF12784 Domain 19 3347 190.2 19 71.91 Changed PD-(D/E)XK nuclease family transposase
PDDEXK_3 PF13366 Domain 49 2275 110.5 35 77.05 Changed PD-(D/E)XK nuclease superfamily
PDDEXK_4 PF14281 Domain 16 665 175.1 17 48.2 Changed PD-(D/E)XK nuclease superfamily
PDDEXK_5 PF11645 Domain 17 198 120 22 76.3 Changed PD-(D/E)XK endonuclease
PDDEXK_6 PF04720 Family 88 2397 196.8 31 62.76 Changed PDDEXK-like family of unknown function
PDDEXK_7 PF04411 Domain 15 427 154 25 23.64 Changed PD-(D/E)XK nuclease superfamily
PDDEXK_9 PF08011 Family 39 2698 100 25 20.97 Changed PD-(D/E)XK nuclease superfamily
PDE4_UCR PF18100 Domain 23 4652 97 66 15.07 Changed Phosphodiesterase 4 upstream conserved regions (UCR)
PDE6_gamma PF04868 Family 3 867 77.3 68 86.5 Changed Retinal cGMP phosphodiesterase, gamma subunit
PDE8 PF08629 Family 2 532 44.9 66 5.48 Changed PDE8 phosphodiesterase
PDEase_I PF00233 Domain 247 19591 226.6 35 32.9 Changed 3'5'-cyclic nucleotide phosphodiesterase
PDEase_II PF02112 Family 4 1232 212.2 22 63.81 Changed cAMP phosphodiesterases class-II
PDEase_I_N PF08499 Family 16 2260 60.2 74 10.35 Changed 3'5'-cyclic nucleotide phosphodiesterase N-terminal
PDGF PF00341 Domain 27 4199 81.8 34 28.82 Changed PDGF/VEGF domain
PDGF_N PF04692 Family 16 753 71.4 45 30.55 Changed Platelet-derived growth factor, N terminal region
PDGLE PF13190 Domain 93 1118 96 30 37.71 Changed PDGLE domain
PDH_C PF20463 Domain 8 7404 100.9 28 29.16 New Prephenate dehydrogenase, dimerization domain
PDH_E1_M PF17831 Domain 1 4442 224.1 52 25.63 Changed Pyruvate dehydrogenase E1 component middle domain
PDH_N PF02153 Domain 8 7752 147.4 25 43.36 Changed Prephenate dehydrogenase, nucleotide-binding domain
PDR_assoc PF08370 Family 136 5422 63.7 39 5.14 Changed Plant PDR ABC transporter associated
PDR_CDR PF06422 Family 433 6765 84.9 27 6.86 Changed CDR ABC transporter
PDS5 PF20168 Repeat 72 5899 639 22 63.5 New Sister chromatid cohesion protein PDS5 protein
PDT PF00800 Family 88 9771 178 33 52.9 Changed Prephenate dehydratase
PdtaS_GAF PF12282 Domain 77 1668 144.6 36 29.56 Changed Histidine kinase PdtaS, GAF domain
PduV-EutP PF10662 Domain 15 586 138.5 33 84.5 Changed Ethanolamine utilisation - propanediol utilisation
PDU_like PF15953 Family 7 51 145.6 27 89.32 Changed Putative propanediol utilisation
PdxA PF04166 Family 390 5924 288.3 37 85.42 Changed Pyridoxal phosphate biosynthetic protein PdxA
PdxJ PF03740 Domain 335 4181 234.2 45 95.05 Changed Pyridoxal phosphate biosynthesis protein PdxJ
PDZ PF00595 Domain 44 167674 81.1 25 15.82 Changed PDZ domain
PDZ_1 PF12812 Domain 28 2248 77.3 32 13.31 Changed PDZ-like domain
PDZ_2 PF13180 Domain 20 32069 89.2 23 21.18 Changed PDZ domain
PDZ_3 PF17815 Domain 33 1447 131.6 39 25.36 Changed PDZ domain
PDZ_4 PF17816 Domain 5 26 105.7 23 19.8 Changed PDZ domain
PDZ_5 PF17817 Domain 10 1864 65.6 65 5.56 Changed PDZ domain
PDZ_6 PF17820 Domain 77 36027 53.5 25 7.09 Changed PDZ domain
PDZ_assoc PF10600 Domain 21 4120 66.4 53 7.98 Changed PDZ-associated domain of NMDA receptors
PE PF00934 Family 249 1548 88.5 37 25.74 Changed PE family
PE-PPE PF08237 Domain 21 761 191.4 21 46.34 Changed PE-PPE domain
Pea-VEAacid PF08111 Family 2 0 0 0 0 Changed Pea-VEAacid family
PEARLI-4 PF05278 Family 6 652 226.1 25 48.92 Changed Arabidopsis phospholipase-like protein (PEARLI 4)
Pecanex_C PF05041 Family 17 2129 210.5 59 11.79 Changed Pecanex protein (C-terminus)
Pectate_lyase PF03211 Repeat 79 2184 191.3 42 67.99 Changed Pectate lyase
Pectate_lyase22 PF14583 Repeat 2 374 316.1 27 78.36 Changed Oligogalacturonate lyase
Pectate_lyase_2 PF06917 Family 1 47 508.6 35 91.62 Changed Periplasmic pectate lyase
Pectate_lyase_3 PF12708 Repeat 50 9470 173.6 21 31 Changed Pectate lyase superfamily protein
Pectate_lyase_4 PF00544 Repeat 5 8032 188.2 32 43.34 Changed Pectate lyase
Pectate_lyase_5 PF20585 Repeat 39 232 135.3 17 13.9 New Putative pectate lyase-like adhesive domain
Pectinesterase PF01095 Repeat 26 15781 250.6 32 58.21 Changed Pectinesterase
Pec_lyase PF09492 Repeat 9 601 263.8 29 53.87 Changed Pectic acid lyase
Pec_lyase_N PF04431 Family 35 751 58.6 36 13.09 Changed Pectate lyase, N terminus
Pedibin PF08182 Family 2 2 35 51 7.17 Changed Pedibin/Hym-346 family
PEGA PF08308 Domain 18 3073 67.2 21 19.4 Changed PEGA domain
PEHE PF15275 Family 36 1441 139.6 31 17.43 Changed PEHE domain
pEK499_p136 PF18736 Domain 8 36 145 21 91.45 Changed HEPN pEK499 p136
PelD_GGDEF PF16963 Domain 15 137 123.2 25 27.06 Changed PelD GGDEF domain
PelG PF16933 Family 57 376 443.8 29 91.22 Changed Putative exopolysaccharide Exporter (EPS-E)
Pellino PF04710 Family 17 1644 340.2 58 90.6 Changed Pellino
PELOTA_1 PF15608 Domain 36 763 81.2 54 14.12 Changed PELOTA RNA binding domain
Pelovaterin PF17859 Domain 1 1 42 100 100 Changed Pelovaterin
PemK_toxin PF02452 Domain 151 7915 104.5 23 81.87 Changed PemK-like, MazF-like toxin of type II toxin-antitoxin system
PEMT PF04191 Family 80 7608 101.5 21 38.48 Changed Phospholipid methyltransferase
PEN-2 PF10251 Family 40 764 85.3 39 63.24 Changed Presenilin enhancer-2 subunit of gamma secretase
Penaeidin PF05927 Family 8 1 56 100 40.29 Changed Penaeidin
Penicillinase_R PF03965 Family 43 8509 112.5 24 86.74 Changed Penicillinase repressor
Penicil_amidase PF01804 Family 288 5513 704.6 23 91.39 Changed Penicillin amidase
Pentapeptide PF00805 Repeat 157 50710 37.4 30 36.34 Changed Pentapeptide repeats (8 copies)
Pentapeptide_2 PF01469 Repeat 55 1985 39.9 46 32.17 Changed Pentapeptide repeats (8 copies)
Pentapeptide_3 PF13576 Repeat 121 1778 48.1 29 20.95 Changed Pentapeptide repeats (9 copies)
Pentapeptide_4 PF13599 Repeat 20 9344 74.8 17 35.79 Changed Pentapeptide repeats (9 copies)
Pentaxin PF00354 Domain 8 5320 185 26 22.7 Changed Pentaxin family
PEP-CTERM PF07589 Motif 159 9456 25.3 45 9.65 Changed PEP-CTERM motif
PEP-utilisers_N PF05524 Family 729 7879 120.6 24 18.95 Changed PEP-utilising enzyme, N-terminal
PEP-utilizers PF00391 Domain 1219 20244 76.3 34 10.39 Changed PEP-utilising enzyme, mobile domain
PEP-utilizers_C PF02896 Domain 14 15831 309.1 32 42.64 Changed PEP-utilising enzyme, PEP-binding domain
Pep1_7 PF17232 Family 17 233 75.9 22 63.65 Changed Elicitor peptide 1-7
Pep3_Vps18 PF05131 Family 110 1661 149.7 29 15.32 Changed Pep3/Vps18/deep orange family
PEPcase PF00311 Family 46 7376 652.5 28 93.47 Changed Phosphoenolpyruvate carboxylase
PEPcase_2 PF14010 Family 17 124 489.3 36 99.12 Changed Phosphoenolpyruvate carboxylase
PEPCK_ATP PF01293 Family 228 6083 426.9 45 82.35 Changed Phosphoenolpyruvate carboxykinase
PEPCK_GTP PF00821 Domain 165 3933 336.6 54 58.02 Changed Phosphoenolpyruvate carboxykinase C-terminal P-loop domain
PEPCK_N PF17297 Domain 159 3818 216 53 36.23 Changed Phosphoenolpyruvate carboxykinase N-terminal domain
Pepdidase_M14_N PF18027 Domain 25 4236 124 31 15.59 Changed Cytosolic carboxypeptidase N-terminal domain
Pepsin-I3 PF06394 Domain 5 224 66 25 46.62 Changed Pepsin inhibitor-3-like repeated domain
PepSY PF03413 Domain 158 5998 62.9 20 26.37 Changed Peptidase propeptide and YPEB domain
PepSY_2 PF13670 Domain 31 1549 81 24 80.73 Changed Peptidase propeptide and YPEB domain
PepSY_like PF11396 Domain 25 1544 78.1 19 68.08 Changed Putative beta-lactamase-inhibitor-like, PepSY-like
PepSY_TM PF03929 Family 448 7945 335 15 76.96 Changed PepSY-associated TM region
PepSY_TM_like_2 PF16357 Family 12 922 190.2 31 89.88 Changed Putative PepSY_TM-like
Peptidase_A17 PF05380 Family 141 5787 126.1 28 13.99 Changed Pao retrotransposon peptidase
Peptidase_A21 PF03566 Family 3 10 369.4 19 64.17 Changed Peptidase family A21
Peptidase_A22B PF04258 Family 14 6148 261.2 31 62.14 Changed Signal peptide peptidase
Peptidase_A24 PF01478 Family 72 8718 111.6 24 49.7 Changed Type IV leader peptidase family
Peptidase_A25 PF03418 Family 17 1586 216.9 29 93.91 Changed Germination protease
Peptidase_A2B PF12384 Family 2 53 133.4 19 21.27 Changed Ty3 transposon peptidase
Peptidase_A2_2 PF12382 Family 2 11 137 100 10.28 Changed Retrotransposon peptidase
Peptidase_A3 PF02160 Family 2 51 161.3 24 23.35 Changed Cauliflower mosaic virus peptidase (A3)
Peptidase_A4 PF01828 Family 131 1546 194.9 32 73.28 Changed Peptidase A4 family
Peptidase_A6 PF01829 Domain 1 4 356.8 35 91.53 Changed Peptidase A6 family
Peptidase_A8 PF01252 Family 684 9288 145.5 31 81.51 Changed Signal peptidase (SPase) II
Peptidase_C1 PF00112 Domain 157 24463 195.8 30 53.57 Changed Papain family cysteine protease
Peptidase_C10 PF01640 Domain 70 539 187.7 28 27.61 Changed Peptidase C10 family
Peptidase_C101 PF16218 Family 16 698 236.3 50 61.73 Changed Peptidase family C101
Peptidase_C107 PF17222 Family 1 12 311.3 70 8.57 Changed Viral cysteine endopeptidase C107
Peptidase_C11 PF03415 Family 6 738 331.7 16 53.9 Changed Clostripain family
Peptidase_C12 PF01088 Domain 349 6366 196 31 59.88 Changed Ubiquitin carboxyl-terminal hydrolase, family 1
Peptidase_C13 PF01650 Family 34 4980 219.1 32 53.94 Changed Peptidase C13 family
Peptidase_C14 PF00656 Domain 112 20750 241.7 16 47.22 Changed Caspase domain
Peptidase_C15 PF01470 Domain 4 3579 178.9 27 79.88 Changed Pyroglutamyl peptidase
Peptidase_C16 PF01831 Family 1 16 248.9 73 4.42 Changed Peptidase C16 family
Peptidase_C1_2 PF03051 Family 13 3323 353 30 88.06 Changed Peptidase C1-like family
Peptidase_C2 PF00648 Family 149 13863 262.8 31 35.38 Changed Calpain family cysteine protease
Peptidase_C21 PF05381 Family 2 7 101.9 25 5.44 Changed Tymovirus endopeptidase
Peptidase_C23 PF05379 Domain 3 55 87.8 31 4.48 Changed Carlavirus endopeptidase
Peptidase_C24 PF03510 Family 5 5 103.2 31 4.92 Changed 2C endopeptidase (C24) cysteine protease family
Peptidase_C25 PF01364 Domain 76 1270 363.4 22 31.16 Changed Peptidase family C25
Peptidase_C25_C PF03785 Domain 7 42 79.4 24 6.81 Changed Peptidase family C25, C terminal ig-like domain
Peptidase_C26 PF07722 Domain 32 7200 204.5 27 72.65 Changed Peptidase C26
Peptidase_C27 PF05407 Family 1 4 164 99 7.75 Changed Rubella virus endopeptidase
Peptidase_C28 PF05408 Family 1 1 201 100 8.66 Changed Foot-and-mouth virus L-proteinase
Peptidase_C3 PF00548 Family 6 111 154.5 18 7.04 Changed 3C cysteine protease (picornain 3C)
Peptidase_C30 PF05409 Family 6 115 289.1 47 5 Changed Coronavirus endopeptidase C30
Peptidase_C31 PF05410 Family 3 10 103.8 56 3.53 Changed Porcine arterivirus-type cysteine proteinase alpha
Peptidase_C32 PF05411 Family 4 29 124.6 33 6.42 Changed Equine arteritis virus putative proteinase
Peptidase_C33 PF05412 Family 4 26 104.9 34 3.9 Changed Equine arterivirus Nsp2-type cysteine proteinase
Peptidase_C34 PF05413 Family 5 3 92 70 4.88 Changed Putative closterovirus papain-like endopeptidase
Peptidase_C36 PF05415 Family 1 4 102.8 43 4.81 Changed Beet necrotic yellow vein furovirus-type papain-like endopeptidase
Peptidase_C37 PF05416 Family 5 5 185.8 10 11.91 Changed Southampton virus-type processing peptidase
Peptidase_C39 PF03412 Family 36 5359 129.6 24 20.14 Changed Peptidase C39 family
Peptidase_C39_2 PF13529 Domain 43 3835 142.4 19 39.19 Changed Peptidase_C39 like family
Peptidase_C3G PF12381 Family 3 27 163.7 20 7.37 Changed Tungro spherical virus-type peptidase
Peptidase_C4 PF00863 Family 2 8 224.9 20 7.4 Changed Peptidase family C4
Peptidase_C41 PF05417 Family 1 1 161 100 9.51 Changed Hepatitis E cysteine protease
Peptidase_C42 PF05533 Domain 8 20 89.2 25 4.58 Changed Beet yellows virus-type papain-like endopeptidase C42
Peptidase_C47 PF05543 Family 3 12 172.4 30 43.71 Changed Staphopain peptidase C47
Peptidase_C48 PF02902 Domain 27 20417 164.1 15 29.81 Changed Ulp1 protease family, C-terminal catalytic domain
Peptidase_C5 PF00770 Domain 4 80 167.5 43 82.85 Changed Adenovirus endoprotease
Peptidase_C50 PF03568 Family 107 2075 311.1 26 20.52 Changed Peptidase family C50
Peptidase_C53 PF05550 Domain 1 1 168 100 4.21 Changed Pestivirus Npro endopeptidase C53
Peptidase_C54 PF03416 Family 174 3750 275.8 36 62.3 Changed Peptidase family C54
Peptidase_C57 PF03290 Family 10 49 395.2 49 96.98 Changed Vaccinia virus I7 processing peptidase
Peptidase_C58 PF03543 Family 14 140 172.7 15 25.97 Changed Yersinia/Haemophilus virulence surface antigen
Peptidase_C6 PF00851 Family 3 9 323.4 22 12.24 Changed Helper component proteinase
Peptidase_C62 PF12380 Family 1 7 250.7 43 4.82 Changed Gill-associated viral 3C-like peptidase
Peptidase_C65 PF10275 Family 20 2981 201.4 26 61.51 Changed Peptidase C65 Otubain
Peptidase_C69 PF03577 Family 9 2870 310.4 24 65.47 Changed Peptidase family C69
Peptidase_C7 PF01830 Family 1 5 211.6 28 11.2 Changed Peptidase C7 family
Peptidase_C70 PF12385 Family 10 754 142.9 19 44.46 Changed Papain-like cysteine protease AvrRpt2
Peptidase_C71 PF12386 Family 2 11 117.3 19 31.9 Changed Pseudomurein endo-isopeptidase Pei
Peptidase_C74 PF12387 Family 1 1 200 100 5.02 Changed Pestivirus NS2 peptidase
Peptidase_C78 PF07910 Family 37 2772 192.3 29 42.33 Changed Peptidase family C78
Peptidase_C8 PF03569 Family 1 3 209.3 52 6.53 Changed Peptidase family C8
Peptidase_C80 PF11713 Domain 13 212 151.3 24 10.52 Changed Peptidase C80 family
Peptidase_C9 PF01707 Family 3 3 204 50 8.25 Changed Peptidase family C9
Peptidase_C92 PF05708 Family 13 1346 155.8 18 53.76 Changed Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
Peptidase_C93 PF06035 Family 41 1719 149.2 30 68.05 Changed Bacterial transglutaminase-like cysteine proteinase BTLCP
Peptidase_C97 PF05903 Domain 29 5335 135.4 34 43.93 Changed PPPDE putative peptidase domain
Peptidase_C98 PF15499 Family 17 433 233.3 50 25.21 Changed Ubiquitin-specific peptidase-like, SUMO isopeptidase
Peptidase_G2 PF11962 Domain 6 149 193.8 29 31.11 Changed Peptidase_G2, IMC autoproteolytic cleavage domain
Peptidase_M1 PF01433 Domain 23 30396 202.1 24 26.39 Changed Peptidase family M1 domain
Peptidase_M10 PF00413 Domain 67 12697 163.6 35 34.48 Changed Matrixin
Peptidase_M10_C PF08548 Repeat 11 1630 194.9 17 27.27 Changed Peptidase M10 serralysin C terminal
Peptidase_M11 PF05548 Family 6 464 245.8 18 39.2 Changed Gametolysin peptidase M11
Peptidase_M13 PF01431 Family 9 12200 188.4 37 28.71 Changed Peptidase family M13
Peptidase_M13_N PF05649 Family 726 12661 341.9 23 52.8 Changed Peptidase family M13
Peptidase_M14 PF00246 Domain 66 26263 248.6 17 44.84 Changed Zinc carboxypeptidase
Peptidase_M15 PF01427 Family 4 3010 164.2 27 76.79 Changed D-ala-D-ala dipeptidase
Peptidase_M15_2 PF05951 Family 7 1621 147.9 40 53.59 Changed Bacterial protein of unknown function (DUF882)
Peptidase_M15_3 PF08291 Domain 10 1605 107.8 26 43.79 Changed Peptidase M15
Peptidase_M15_4 PF13539 Family 224 2602 72.1 28 26.23 Changed D-alanyl-D-alanine carboxypeptidase
Peptidase_M16 PF00675 Family 22 34678 136.2 21 21.73 Changed Insulinase (Peptidase family M16)
Peptidase_M16_C PF05193 Domain 131 44133 181.8 15 34.58 Changed Peptidase M16 inactive domain
Peptidase_M16_M PF16187 Family 221 5343 259.6 28 27.86 Changed Middle or third domain of peptidase_M16
Peptidase_M17 PF00883 Domain 650 12121 296.2 39 61.74 Changed Cytosol aminopeptidase family, catalytic domain
Peptidase_M17_N PF02789 Domain 68 7174 123.6 21 24.76 Changed Cytosol aminopeptidase family, N-terminal domain
Peptidase_M18 PF02127 Family 8 6117 393.9 34 89.17 Changed Aminopeptidase I zinc metalloprotease (M18)
Peptidase_M19 PF01244 Domain 40 8559 319.8 28 84.07 Changed Membrane dipeptidase (Peptidase family M19)
Peptidase_M1_N PF17900 Domain 22 24226 169.8 20 21.97 Changed Peptidase M1 N-terminal domain
Peptidase_M2 PF01401 Family 54 3688 473.3 36 83.59 Changed Angiotensin-converting enzyme
Peptidase_M20 PF01546 Family 360 70318 322.3 14 75.19 Changed Peptidase family M20/M25/M40
Peptidase_M23 PF01551 Family 234 37395 98.3 32 26.59 Changed Peptidase family M23
Peptidase_M23_N PF18421 Domain 26 296 73.1 37 25.88 Changed Peptidase family M23 N-terminal domain
Peptidase_M24 PF00557 Domain 382 52724 225.9 21 53.97 Changed Metallopeptidase family M24
Peptidase_M24_C PF16188 Domain 532 5755 61.8 38 9.86 Changed C-terminal region of peptidase_M24
Peptidase_M26_C PF07580 Family 4 80 665 26 40.18 Changed M26 IgA1-specific Metallo-endopeptidase C-terminal region
Peptidase_M26_N PF05342 Family 18 144 157.2 24 12.34 Changed M26 IgA1-specific Metallo-endopeptidase N-terminal region
Peptidase_M27 PF01742 Family 2 14 380.1 32 32.66 Changed Clostridial neurotoxin zinc protease
Peptidase_M28 PF04389 Family 54 26552 201.7 20 36.19 Changed Peptidase family M28
Peptidase_M29 PF02073 Family 200 3897 355.1 28 88.7 Changed Thermophilic metalloprotease (M29)
Peptidase_M3 PF01432 Family 29 17847 389.1 22 62.69 Changed Peptidase family M3
Peptidase_M30 PF10460 Family 3 66 316.7 29 58.98 Changed Peptidase M30
Peptidase_M32 PF02074 Family 20 2537 463.8 36 96.63 Changed Carboxypeptidase Taq (M32) metallopeptidase
Peptidase_M35 PF02102 Family 4 812 319.8 31 91.46 Changed Deuterolysin metalloprotease (M35) family
Peptidase_M36 PF02128 Family 98 2112 344.8 34 50.07 Changed Fungalysin metallopeptidase (M36)
Peptidase_M3_N PF08439 Family 412 4248 68.7 25 11.45 Changed Oligopeptidase F
Peptidase_M4 PF01447 Domain 86 3926 140 31 22.79 Changed Thermolysin metallopeptidase, catalytic domain
Peptidase_M41 PF01434 Domain 27 20109 181.5 37 26.67 Changed Peptidase family M41
Peptidase_M42 PF05343 Family 47 5625 282.3 28 80.46 Changed M42 glutamyl aminopeptidase
Peptidase_M43 PF05572 Family 4 3727 143.6 30 22.23 Changed Pregnancy-associated plasma protein-A
Peptidase_M44 PF03410 Family 8 39 593.9 50 98.66 Changed Metallopeptidase from vaccinia pox
Peptidase_M48 PF01435 Domain 22 27987 189.2 20 50.67 Changed Peptidase family M48
Peptidase_M48_N PF16491 Domain 285 3873 173.4 26 40.08 Changed CAAX prenyl protease N-terminal, five membrane helices
Peptidase_M49 PF03571 Family 104 3305 363.3 25 64.28 Changed Peptidase family M49
Peptidase_M4_C PF02868 Domain 49 4006 165.7 35 27.22 Changed Thermolysin metallopeptidase, alpha-helical domain
Peptidase_M50 PF02163 Family 57 53267 248.9 10 59.82 Changed Peptidase family M50
Peptidase_M50B PF13398 Family 63 2781 191.1 27 76.3 Changed Peptidase M50B-like
Peptidase_M54 PF07998 Family 5 974 111.5 32 35.61 Changed Peptidase family M54
Peptidase_M55 PF04951 Family 119 1389 256.8 37 94.83 Changed D-aminopeptidase
Peptidase_M56 PF05569 Domain 11 5394 230.3 18 40.11 Changed BlaR1 peptidase M56
Peptidase_M57 PF12388 Family 7 524 192.7 27 63.34 Changed Dual-action HEIGH metallo-peptidase
Peptidase_M6 PF05547 Domain 4 2284 371.3 22 47.08 Changed Immune inhibitor A peptidase M6
Peptidase_M60 PF13402 Domain 24 1539 249.1 27 28.52 Changed Peptidase M60, enhancin and enhancin-like
Peptidase_M60_C PF18630 Domain 10 44 64.7 32 6.6 Changed Peptidase M60 C-terminal domain
Peptidase_M61 PF05299 Family 160 2587 115.1 32 19.3 Changed M61 glycyl aminopeptidase
Peptidase_M61_N PF17899 Domain 118 2452 170.9 26 28.43 Changed Peptidase M61 N-terminal domain
Peptidase_M64 PF09471 Family 8 1053 258.1 27 48.86 Changed IgA Peptidase M64
Peptidase_M66 PF10462 Family 10 206 220 20 28.77 Changed Peptidase M66
Peptidase_M7 PF02031 Domain 2 618 132.1 49 63.65 Changed Streptomyces extracellular neutral proteinase (M7) family
Peptidase_M73 PF12389 Family 11 705 142.9 21 63.42 Changed Camelysin metallo-endopeptidase
Peptidase_M74 PF03411 Family 67 1261 227.6 38 73.87 Changed Penicillin-insensitive murein endopeptidase
Peptidase_M75 PF09375 Family 55 3986 281 21 73.69 Changed Imelysin
Peptidase_M76 PF09768 Family 118 1821 162.8 39 69.95 Changed Peptidase M76 family
Peptidase_M78 PF06114 Family 49 9304 121.2 16 34.36 Changed IrrE N-terminal-like domain
Peptidase_M8 PF01457 Family 8 3585 299.6 20 61.45 Changed Leishmanolysin
Peptidase_M85 PF13678 Family 8 10 239.9 37 56.86 Changed NFkB-p65-degrading zinc protease
Peptidase_M9 PF01752 Family 23 576 277.7 30 37.12 Changed Collagenase
Peptidase_M90 PF06167 Family 99 1740 236.8 29 86.78 Changed Glucose-regulated metallo-peptidase M90
Peptidase_M91 PF14891 Family 27 257 171.6 17 28.13 Changed Effector protein
Peptidase_M99 PF17033 Domain 2 127 249.6 37 52 Changed Carboxypeptidase controlling helical cell shape catalytic
Peptidase_M99_C PF17129 Domain 2 79 96.2 35 21.55 Changed C-terminal domain of metallo-carboxypeptidase
Peptidase_M99_m PF17130 Domain 2 30 71.6 34 15.3 Changed beta-barrel domain of carboxypeptidase M99
Peptidase_M9_N PF08453 Repeat 31 429 178.8 27 21.8 Changed Peptidase family M9 N-terminal
Peptidase_MA_2 PF13485 Domain 2 291 192.5 20 37.02 Changed Peptidase MA superfamily
Peptidase_Mx PF15887 Family 75 1209 232.8 43 66.35 Changed Putative zinc-binding metallo-peptidase
Peptidase_Mx1 PF15890 Family 45 424 234.9 26 73.13 Changed Putative zinc-binding metallo-peptidase
Peptidase_Prp PF04327 Family 277 1722 102.6 29 92.82 Changed Cysteine protease Prp
Peptidase_S10 PF00450 Domain 50 26391 331.3 23 79.58 Changed Serine carboxypeptidase
Peptidase_S11 PF00768 Domain 10 13887 232.6 30 57.79 Changed D-alanyl-D-alanine carboxypeptidase
Peptidase_S13 PF02113 Family 9 7351 287.9 20 85.43 Changed D-Ala-D-Ala carboxypeptidase 3 (S13) family
Peptidase_S15 PF02129 Family 46 11366 240.7 19 43.71 Changed X-Pro dipeptidyl-peptidase (S15 family)
Peptidase_S21 PF00716 Family 5 94 294.8 28 51.1 Changed Assemblin (Peptidase family S21)
Peptidase_S24 PF00717 Domain 95 18206 115.9 23 53.16 Changed Peptidase S24-like
Peptidase_S26 PF10502 Domain 71 23661 152.6 23 71.63 Changed Signal peptidase, peptidase S26
Peptidase_S28 PF05577 Domain 12 7740 325.6 23 77.79 Changed Serine carboxypeptidase S28
Peptidase_S29 PF02907 Domain 9 2 148.5 31 4.97 Changed Hepatitis C virus NS3 protease
Peptidase_S3 PF00944 Domain 2 9 125.4 38 16.21 Changed Alphavirus core protein
Peptidase_S30 PF01577 Family 26 6 181.8 22 8.71 Changed Potyvirus P1 protease
Peptidase_S31 PF05578 Family 1 2 200 23 4.39 Changed Pestivirus NS3 polyprotein peptidase S31
Peptidase_S32 PF05579 Family 6 33 266.5 32 10.4 Changed Equine arteritis virus serine endopeptidase S32
Peptidase_S37 PF05576 Family 1 576 418.2 44 91.37 Changed PS-10 peptidase S37
Peptidase_S39 PF02122 Family 15 106 194.6 30 25.14 Changed Peptidase S39
Peptidase_S41 PF03572 Family 111 20699 172.3 24 30.98 Changed Peptidase family S41
Peptidase_S41_N PF11918 Domain 39 1412 111.6 25 34.83 Changed N-terminal domain of Peptidase_S41 in eukaryotic IRBP
Peptidase_S46 PF10459 Family 35 1744 648 32 96.13 Changed Peptidase S46
Peptidase_S48 PF03574 Family 1 92 147.3 76 49.14 Changed Peptidase family S48
Peptidase_S49 PF01343 Family 17 11238 151.5 27 47.66 Changed Peptidase family S49
Peptidase_S49_N PF08496 Family 76 858 148.9 41 42.87 Changed Peptidase family S49 N-terminal
Peptidase_S51 PF03575 Domain 21 4905 194.9 20 72.72 Changed Peptidase family S51
Peptidase_S55 PF05580 Family 182 1336 193.1 42 45.41 Changed SpoIVB peptidase S55
Peptidase_S58 PF03576 Family 194 4153 311.2 31 90.67 Changed Peptidase family S58
Peptidase_S6 PF02395 Family 3 134 419.1 20 43.64 Changed Immunoglobulin A1 protease
Peptidase_S64 PF08192 Family 20 191 364 22 63.54 Changed Peptidase family S64
Peptidase_S66 PF02016 Domain 254 5417 118.2 30 36.73 Changed LD-carboxypeptidase N-terminal domain
Peptidase_S66C PF17676 Domain 240 5474 117.3 29 36.72 Changed LD-carboxypeptidase C-terminal domain
Peptidase_S68 PF10461 Family 10 311 34.8 62 3.92 Changed Peptidase S68
Peptidase_S7 PF00949 Family 7 37 86.9 21 14.32 Changed Peptidase S7, Flavivirus NS3 serine protease
Peptidase_S74 PF13884 Domain 236 3247 57.5 31 7.08 Changed Chaperone of endosialidase
Peptidase_S76 PF13611 Domain 6 3 125 25 3.88 Changed Serine peptidase of plant viral polyprotein, P1
Peptidase_S77 PF03420 Family 2 252 171 39 72.29 Changed Prohead core protein serine protease
Peptidase_S78 PF04586 Family 14 2963 150.3 24 56.12 Changed Caudovirus prohead serine protease
Peptidase_S78_2 PF14550 Family 14 239 121.9 24 43.85 Changed Putative phage serine protease XkdF
Peptidase_S8 PF00082 Domain 44 62667 303 20 44.22 Changed Subtilase family
Peptidase_S80 PF20034 Family 20 55 227.1 31 88.24 Changed Peptidase S80 family
Peptidase_S8_N PF16361 Family 35 214 138.3 26 10.94 Changed N-terminal of Subtilase family
Peptidase_S9 PF00326 Domain 58 43467 195.3 20 29.72 Changed Prolyl oligopeptidase family
Peptidase_S9_N PF02897 Repeat 30 10230 369.9 20 55.07 Changed Prolyl oligopeptidase, N-terminal beta-propeller domain
Peptidase_U32 PF01136 Family 86 9343 226.4 26 53.63 Changed Peptidase family U32
Peptidase_U32_C PF16325 Domain 309 2482 82.6 28 19.33 Changed Peptidase family U32 C-terminal domain
Peptidase_U4 PF03419 Family 125 1124 274.3 23 95.5 Changed Sporulation factor SpoIIGA
Peptidase_U40 PF10464 Family 1 2 211.5 85 96.36 Changed Peptidase U40
Peptidase_U49 PF10463 Family 3 53 184.3 18 56.91 Changed Peptidase U49
Peptidase_U57 PF05582 Family 68 745 252 42 96.44 Changed YabG peptidase U57
Pept_S41_N PF18294 Domain 63 753 57 27 11.9 Changed Peptidase S41 N-terminal domain
Pept_tRNA_hydro PF01195 Domain 836 10245 178.3 36 86.8 Changed Peptidyl-tRNA hydrolase
PepX_C PF08530 Domain 22 8492 228.6 17 36.35 Changed X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
PepX_N PF09168 Domain 23 181 146.9 31 19.4 Changed X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
Pep_deformylase PF01327 Domain 75 14442 154.2 35 82.8 Changed Polypeptide deformylase
PEP_hydrolase PF09370 Domain 66 1436 253.1 56 71.02 Changed Phosphoenolpyruvate hydrolase-like
Pep_M12B_propep PF01562 Family 210 16227 131 22 14.02 Changed Reprolysin family propeptide
PEP_mutase PF13714 Domain 69 9182 239.4 29 78.75 Changed Phosphoenolpyruvate phosphomutase
Per1 PF04080 Family 151 2329 222.3 37 74.37 Changed Per1-like family
PerB PF06590 Family 2 0 0 0 0 Changed PerB protein
PerC PF06069 Family 4 87 66.3 30 56.29 Changed PerC transcriptional activator
Pericardin_rpt PF07054 Repeat 15 495 33.6 70 31.26 Changed Pericardin like repeat
Perilipin PF03036 Family 35 2430 279.3 27 69.65 Changed Perilipin family
Perilipin_2 PF17316 Family 47 352 146.7 25 62.83 Changed Perilipin protein
Period_C PF12114 Family 25 1510 161.1 42 13.43 Changed Period protein 2/3C-terminal region
Peripla_BP_1 PF00532 Domain 6 6690 253 19 75.7 Changed Periplasmic binding proteins and sugar binding domain of LacI family
Peripla_BP_2 PF01497 Domain 23 25406 233.3 16 70.06 Changed Periplasmic binding protein
Peripla_BP_3 PF13377 Domain 66 54862 161.2 25 46.5 Changed Periplasmic binding protein-like domain
Peripla_BP_4 PF13407 Family 166 29832 258.5 19 73.64 Changed Periplasmic binding protein domain
Peripla_BP_5 PF13433 Domain 33 3076 357.5 45 84.58 Changed Periplasmic binding protein domain
Peripla_BP_6 PF13458 Family 147 30703 338.7 18 82.32 Changed Periplasmic binding protein
Peripla_BP_7 PF18610 Domain 5 93 71 77 16.64 Changed Periplasmic binding protein domain
Periviscerokin PF08259 Family 6 74 9.5 71 6.1 Changed Periviscerokinin family
Perm-CXXC PF15629 Family 18 552 31.7 54 1.96 Changed Permuted single zf-CXXC unit
peroxidase PF00141 Domain 156 32862 245.6 26 73.58 Changed Peroxidase
Peroxidase_2 PF01328 Family 47 3462 202.4 26 61.36 Changed Peroxidase, family 2
Peroxidase_ext PF11895 Family 25 633 75.4 43 21.26 Changed Fungal peroxidase extension region
Peroxin-13_N PF04088 Family 83 1270 134.3 41 33.13 Changed Peroxin 13, N-terminal region
Peroxin-22 PF12827 Family 23 70 114.2 26 65.69 Changed Peroxisomal biogenesis protein family
Peroxin-3 PF04882 Family 94 2472 249.2 23 84.18 Changed Peroxin-3
Pertactin PF03212 Repeat 8 331 119.2 25 10.8 Changed Pertactin
Pertus-S4-tox PF09275 Domain 1 1 110 100 72.37 Changed Pertussis toxin S4 subunit
Pertus-S5-tox PF09276 Domain 1 1 97 100 72.93 Changed Pertussis toxin S5 subunit
Pertussis_S1 PF02917 Domain 2 87 110.3 27 21.69 Changed Pertussis toxin, subunit 1
Pertussis_S2S3 PF02918 Domain 3 6 106 25 53.4 Changed Pertussis toxin, subunit 2 and 3, C-terminal domain
Pes-10 PF07149 Family 9 31 237.1 18 86.41 Changed Pes-10
Pescadillo_N PF06732 Family 35 1904 251.8 49 43 Changed Pescadillo N-terminus
Pesticin PF16754 Domain 5 123 148.9 21 23.58 Changed Bacterial toxin homologue of phage lysozyme, C-term
Pestivirus_E2 PF16329 Domain 1 1 372 100 9.33 Changed Pestivirus envelope glycoprotein E2
PET PF06297 Domain 32 2780 81.6 48 13.33 Changed PET Domain
Pet100 PF09803 Family 35 1253 75.2 31 72.12 Changed Pet100
PET117 PF15786 Family 93 982 66.6 37 68.88 Changed PET assembly of cytochrome c oxidase, mitochondrial
PET122 PF05476 Family 7 26 258.4 35 88.99 Changed PET122
Pet127 PF08634 Domain 92 789 264.8 49 31.34 Changed Mitochondrial protein Pet127
Pet191_N PF10203 Family 67 1309 64.3 43 56.77 Changed Cytochrome c oxidase assembly protein PET191
Pet20 PF08692 Family 12 132 94.3 21 36.34 Changed Mitochondrial protein Pet20
PetG PF02529 Family 14 279 35.5 71 68.79 Changed Cytochrome B6-F complex subunit 5
PetL PF05115 Family 19 164 30.7 50 87.19 Changed Cytochrome B6-F complex subunit VI (PetL)
PetM PF08041 Family 22 389 29.8 57 28.48 Changed PetM family of cytochrome b6f complex subunit 7
PetN PF03742 Family 14 178 28.7 63 74.19 Changed PetN
PEX-1N PF09262 Domain 98 1715 79.8 38 7.24 Changed Peroxisome biogenesis factor 1, N-terminal
PEX-2N PF09263 Domain 14 458 76.7 57 6.48 Changed Peroxisome biogenesis factor 1, N-terminal
PEX11 PF05648 Family 47 4373 207.4 19 79.13 Changed Peroxisomal biogenesis factor 11 (PEX11)
Pex14_N PF04695 Domain 30 2411 45.4 44 11.03 Changed Pex14 N-terminal domain
Pex16 PF08610 Family 103 1773 296.9 27 83.48 Changed Peroxisomal membrane protein (Pex16)
Pex19 PF04614 Family 78 1718 232 26 74.25 Changed Pex19 protein family
Pex24p PF06398 Family 51 3409 247.5 23 36.58 Changed Integral peroxisomal membrane peroxin
Pex26 PF07163 Family 10 411 251 42 86.18 Changed Pex26 protein
Pex2_Pex12 PF04757 Family 107 4617 217.2 18 55.29 Changed Pex2 / Pex12 amino terminal region
PfaD_N PF18328 Domain 44 156 58.8 31 10.83 Changed Fatty acid synthase subunit PfaD N-terminal domain
PFam54_60 PF05714 Domain 43 58 178 21 64.13 Changed Borrelia Bbcrasp-1 domain containing protein
PFEMP PF03011 Domain 11 1470 144.6 28 12.46 Changed PFEMP1 DBL domain
Pfg27 PF09216 Domain 2 58 165 29 47.98 Changed Pfg27
PFK PF00365 Domain 706 21644 284 31 73.86 Changed Phosphofructokinase
PfkB PF00294 Domain 50 55298 272.2 18 82.65 Changed pfkB family carbohydrate kinase
Pfk_N PF18468 Domain 6 86 94.6 36 9.72 Changed Phosphofructokinase N-terminal domain yeast
PFL-like PF02901 Family 123 4147 583.6 34 78.98 Changed Pyruvate formate lyase-like
PFOR_II PF17147 Domain 27 7220 98.9 26 13 Changed Pyruvate:ferredoxin oxidoreductase core domain II
PFO_beta_C PF12367 Family 113 957 66.3 34 22.54 Changed Pyruvate ferredoxin oxidoreductase beta subunit C terminal
PFU PF09070 Domain 119 1906 108.4 43 14.73 Changed PFU (PLAA family ubiquitin binding)
PfUIS3 PF11567 Family 2 22 99 52 45.13 Changed Plasmodium falciparum UIS3 membrane protein
Pga1 PF10333 Family 13 310 165.9 18 69.95 Changed GPI-Mannosyltransferase II co-activator
PGA2 PF07543 Family 29 489 124.3 28 72.56 Changed Protein trafficking PGA2
PgaD PF13994 Family 15 222 130.3 20 77.34 Changed PgaD-like protein
PGAP1 PF07819 Family 19 3751 176.6 22 23.9 Changed PGAP1-like protein
PgaPase_1 PF06162 Domain 4 56 147.6 33 62.8 Changed Putative pyroglutamyl peptidase PgaPase_1
PGA_cap PF09587 Domain 97 4871 245.9 26 60.59 Changed Bacterial capsule synthesis protein PGA_cap
PGBA_C PF15437 Disordered 2 3 81 64 24.45 Changed Plasminogen-binding protein pgbA C-terminal
PGBA_N PF15436 Family 15 81 208.7 30 79.27 Changed Plasminogen-binding protein pgbA N-terminal
PGC7_Stella PF15549 Family 10 219 143.5 33 85.49 Changed PGC7/Stella/Dppa3 domain
PgdA_N PF18627 Domain 6 34 198.6 20 45.81 Changed Peptidoglycan GlcNAc deacetylase N-terminal domain
PGDH_C PF16896 Domain 11 374 153.3 49 55.37 Changed Phosphogluconate dehydrogenase (decarboxylating) C-term
PGDH_inter PF19304 Domain 186 5091 120.1 29 22.12 Changed D-3-phosphoglycerate dehydrogenase intervening domain
PGDYG PF14083 Family 5 98 98.7 57 62.66 Changed PGDYG protein
PGF-CTERM PF18204 Motif 92 567 23 50 3.93 Changed PGF-CTERM motif
PGG PF13962 Domain 101 14897 109.7 25 26.56 Changed Domain of unknown function
PGI PF00342 Domain 7 12267 383.2 34 80.97 Changed Phosphoglucose isomerase
PGK PF00162 Domain 741 11839 363.3 44 90.81 Changed Phosphoglycerate kinase
PglD_N PF17836 Domain 105 2543 79.1 23 33.8 Changed PglD N-terminal domain
PglL_A PF15864 Domain 33 409 25.6 39 4.55 Changed Protein glycosylation ligase
PglZ PF08665 Domain 9 1744 184.3 26 27.73 Changed PglZ domain
PGM1_C PF18105 Domain 25 316 53.6 33 11.14 Changed PGM1 C-terminal domain
PGM_PMM_I PF02878 Domain 76 30996 131 26 26.34 Changed Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
PGM_PMM_II PF02879 Domain 57 27095 104.2 26 20.02 Changed Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PGM_PMM_III PF02880 Domain 374 27599 116.7 22 22.49 Changed Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
PGM_PMM_IV PF00408 Repeat 57 25124 81.7 20 16.15 Changed Phosphoglucomutase/phosphomannomutase, C-terminal domain
PgpA PF04608 Family 79 3623 143.1 28 84.62 Changed Phosphatidylglycerophosphatase A
PGPGW PF09656 Family 18 1377 52.2 39 36.63 Changed Putative transmembrane protein (PGPGW)
PGP_phosphatase PF09419 Family 14 1443 154 29 61.57 Changed Mitochondrial PGP phosphatase
PG_binding_1 PF01471 Domain 194 34817 56.5 25 15.49 Changed Putative peptidoglycan binding domain
PG_binding_2 PF08823 Domain 8 280 70.3 28 24.43 Changed Putative peptidoglycan binding domain
PG_binding_3 PF09374 Domain 6 1222 77 32 36.94 Changed Predicted Peptidoglycan domain
PG_binding_4 PF12229 Domain 45 3409 112.8 14 27.34 Changed Putative peptidoglycan binding domain
PG_isomerase_N PF18353 Domain 7 26 111.8 48 35.08 Changed Phosphoglucose isomerase N-terminal domain
PH PF00169 Domain 111 138379 104.5 17 12.22 Changed PH domain
Ph1570 PF09638 Domain 2 4 155 61 97.64 Changed Ph1570 protein
PHA-1 PF06542 Family 9 155 339.6 24 72.71 Changed Regulator protein PHA-1
PhaC_N PF07167 Family 23 3144 168.9 42 28.72 Changed Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus
PHAF1 PF03676 Family 21 2419 268.9 26 77.26 Changed Phagosome assembly factor 1
Phage-A118_gp45 PF10653 Family 1 8 62 89 100 Changed Protein gp45 of Bacteriophage A118
Phage-Gp8 PF09215 Domain 2 131 273.2 43 71.96 Changed Bacteriophage T4, Gp8
Phage-MuB_C PF09077 Domain 12 117 75.8 32 24.57 Changed Mu B transposition protein, C terminal
Phage-scaffold PF09306 Domain 2 40 273.1 61 98.31 Changed Bacteriophage, scaffolding protein
Phage-tail_1 PF09097 Domain 1 73 194.3 53 48.56 Changed Baseplate structural protein, domain 1
Phage-tail_2 PF09096 Domain 1 63 172.3 58 42.5 Changed Baseplate structural protein, domain 2
Phage-tail_3 PF13550 Domain 41 2118 162.7 18 14.97 Changed Putative phage tail protein
PhageMetallopep PF18894 Domain 72 259 143.6 21 77.14 Changed Putative phage metallopeptidase
PhageMin_Tail PF10145 Family 183 3116 210.5 17 19.72 Changed Phage-related minor tail protein
PhageP22-tail PF09251 Repeat 2 81 476.5 57 79.42 Changed Salmonella phage P22 tail-spike
Phageshock_PspD PF09584 Family 3 85 60.6 53 77.15 Changed Phage shock protein PspD (Phageshock_PspD)
Phageshock_PspG PF09583 Family 8 143 63.8 49 81.72 Changed Phage shock protein G (Phageshock_PspG)
Phage_186_Fil PF10893 Family 6 55 59.2 39 85.83 Changed Bacteriophage 186, Fil
Phage_1_1 PF08200 Family 6 58 42 42 83.28 Changed Bacteriophage 1.1 Protein
Phage_30_3 PF08010 Family 3 113 135.7 44 81.61 Changed Bacteriophage protein GP30.3
Phage_30_8 PF06019 Family 2 42 117.9 51 98.74 Changed Phage GP30.8 protein
Phage_ABA_S PF18066 Domain 24 108 92.8 23 79.37 Changed Phage ABA sandwich domain
Phage_AlpA PF05930 Family 12 2852 50.4 30 64.66 Changed Prophage CP4-57 regulatory protein (AlpA)
Phage_antitermQ PF06530 Family 24 322 112.1 28 83.44 Changed Phage antitermination protein Q
Phage_antiter_Q PF06323 Family 3 54 206.3 36 94.46 Changed Phage antitermination protein Q
Phage_Arf PF17585 Family 2 14 47.1 78 99.7 Changed Accessory recombination function protein
Phage_ASH PF10554 Family 8 104 99 28 47.98 Changed Ash protein family
Phage_attach PF05354 Domain 3 44 113.8 65 98.2 Changed Phage Head-Tail Attachment
Phage_B PF02304 Family 1 21 111.2 73 64.21 Changed Scaffold protein B
Phage_base_V PF04717 Domain 57 5355 74.7 30 12.72 Changed Type VI secretion system/phage-baseplate injector OB domain
Phage_BR0599 PF09356 Family 64 1302 80.1 37 27.72 Changed Phage conserved hypothetical protein BR0599
Phage_C PF12025 Family 1 49 63.8 85 68.16 Changed Phage protein C
Phage_capsid PF05065 Family 65 5001 269.9 18 68.93 Changed Phage capsid family
Phage_capsid_2 PF19821 Family 17 230 269.5 21 91.33 Changed Phage capsid protein
Phage_Capsid_P3 PF09018 Domain 1 2 388 28 97.73 Changed P3 major capsid protein
Phage_cap_E PF03864 Family 60 1406 312.9 16 91.73 Changed Phage major capsid protein E
Phage_cap_P2 PF05125 Family 28 357 318.5 41 94.17 Changed Phage major capsid protein, P2 family
Phage_CII PF05269 Family 3 186 87.7 32 90.45 Changed Bacteriophage CII protein
Phage_CI_C PF16452 Domain 6 120 100.6 29 49.67 Changed Bacteriophage CI repressor C-terminal domain
Phage_CI_repr PF07022 Domain 12 661 62.9 24 32.52 Changed Bacteriophage CI repressor helix-turn-helix domain
Phage_clamp_A PF16790 Domain 2 195 129.2 27 81.88 Changed Bacteriophage clamp loader A subunit
Phage_coat PF09063 Domain 2 2 126.5 48 98.44 Changed Phage PP7 coat protein
Phage_coatGP8 PF19199 Family 11 30 67.9 33 87.31 Changed Phage major coat protein, Gp8
Phage_Coat_A PF05357 Domain 3 16 61 35 24.49 Changed Phage Coat Protein A
Phage_Coat_B PF05356 Family 69 133 57.4 24 75.91 Changed Inovirus Coat protein B
Phage_connector PF05352 Family 4 59 277.3 26 70.58 Changed Phage Connector (GP10)
Phage_connect_1 PF05135 Domain 29 2260 89.2 17 71.35 Changed Phage gp6-like head-tail connector protein
Phage_Cox PF10743 Family 4 56 82.3 39 82.81 Changed Regulatory phage protein cox
Phage_CP76 PF06892 Family 91 600 134.4 16 83.93 Changed Phage regulatory protein CII (CP76)
Phage_CRI PF05144 Domain 15 191 216.1 15 61.99 Changed Phage replication protein CRI
Phage_DNA_bind PF02303 Domain 5 53 81.2 27 84.71 Changed Helix-destabilising protein
Phage_DsbA PF11126 Family 2 91 66.7 45 73.15 Changed Transcriptional regulator DsbA
Phage_endo_I PF05367 Domain 6 219 136 47 94.24 Changed Phage endonuclease I
Phage_F PF02305 Domain 7 555 346.2 22 90.75 Changed Capsid protein (F protein)
Phage_fiber PF03335 Repeat 16 159 13.1 45 13.43 Changed Phage tail fibre repeat
Phage_fiber_2 PF03406 Repeat 31 420 40.7 42 10.01 Changed Phage tail fibre repeat
Phage_fiber_C PF06820 Family 2 79 62.5 64 20.14 Changed Putative prophage tail fibre C-terminus
Phage_FRD3 PF05798 Family 1 17 75.1 59 99.38 Changed Bacteriophage FRD3 protein
Phage_G PF02306 Domain 1 54 170 81 97.23 Changed Major spike protein (G protein)
Phage_glycop_gL PF11108 Family 5 27 104.2 28 68.7 Changed Viral glycoprotein L
Phage_Gp111 PF07410 Family 6 55 106.6 37 90.97 Changed Streptococcus thermophilus bacteriophage Gp111 protein
Phage_Gp15 PF06854 Family 16 336 155.4 24 86.54 Changed Bacteriophage Gp15 protein
Phage_Gp17 PF17549 Family 1 4 122 60 80.66 Changed Gene Product 17
Phage_Gp19 PF09355 Domain 7 374 107 33 79.26 Changed Phage protein Gp19/Gp15/Gp42
Phage_GP20 PF06810 Family 19 513 144.1 23 74.67 Changed Phage minor structural protein GP20
Phage_Gp23 PF10669 Family 2 6 120 96 99.17 Changed Protein gp23 (Bacteriophage A118)
Phage_gp49_66 PF13876 Family 13 241 84 35 59.6 Changed Phage protein (N4 Gp49/phage Sf6 gene 66) family
Phage_gp53 PF11246 Family 2 199 165.4 25 79.89 Changed Base plate wedge protein 53
Phage_GPA PF05840 Family 11 452 282.5 31 47.41 Changed Bacteriophage replication gene A protein (GPA)
Phage_GPD PF05954 Family 73 5103 282.4 17 44.51 Changed Phage tail baseplate hub (GPD)
Phage_GPL PF05926 Family 28 334 135.2 33 86.48 Changed Phage head completion protein (GPL)
Phage_GPO PF05929 Family 20 339 260 35 95.2 Changed Phage capsid scaffolding protein (GPO) serine peptidase
Phage_head_chap PF11113 Family 10 83 55.1 43 51.55 Changed Head assembly gene product
Phage_head_fibr PF11133 Family 3 102 94.9 28 64.18 Changed Head fiber protein
Phage_HK97_TLTM PF06120 Family 1 68 256.5 32 24.95 Changed Tail length tape measure protein
Phage_holin_1 PF04531 Family 18 614 77.3 34 84.29 Changed Bacteriophage holin
Phage_holin_2_1 PF04971 Family 8 153 61.6 47 83.1 Changed Bacteriophage P21 holin S
Phage_holin_2_2 PF10746 Family 2 158 57.3 44 85.89 Changed Phage holin T7 family, holin superfamily II
Phage_holin_2_3 PF16080 Family 11 187 56.5 30 74.42 Changed Bacteriophage holin family HP1
Phage_holin_2_4 PF16082 Family 3 47 77.1 28 86.2 Changed Bacteriophage holin family, superfamily II-like
Phage_holin_3_1 PF05106 Family 21 250 97.7 28 88.27 Changed Phage holin family (Lysis protein S)
Phage_holin_3_2 PF04550 Family 6 80 84.7 47 87.49 Changed Phage holin family 2
Phage_holin_3_3 PF16083 Family 33 256 77.7 22 69.94 Changed LydA holin phage, holin superfamily III
Phage_holin_3_5 PF16085 Family 2 30 109.9 58 96.29 Changed Bacteriophage holin Hol, superfamily III
Phage_holin_3_6 PF07332 Domain 266 4747 112.8 22 77.34 Changed Putative Actinobacterial Holin-X, holin superfamily III
Phage_holin_3_7 PF05449 Domain 15 168 79.5 30 80.19 Changed Putative 3TM holin, Phage_holin_3
Phage_holin_4_1 PF05105 Family 128 1582 114.1 28 79.23 Changed Bacteriophage holin family
Phage_holin_4_2 PF04020 Family 420 4713 109 31 64.73 Changed Mycobacterial 4 TMS phage holin, superfamily IV
Phage_holin_5_1 PF06946 Family 2 119 88 35 94.9 Changed Bacteriophage A118-like holin, Hol118
Phage_holin_5_2 PF16079 Family 47 387 69.4 30 75.17 Changed Phage holin family Hol44, in holin superfamily V
Phage_holin_6_1 PF09682 Family 13 408 100.3 24 83.1 Changed Bacteriophage holin of superfamily 6 (Holin_LLH)
Phage_holin_7_1 PF16081 Family 1 99 121.1 37 88.8 Changed Mycobacterial 2 TMS Phage Holin (M2 Hol) Family
Phage_holin_8 PF16931 Family 8 192 117.7 27 93.51 Changed Putative phage holin
Phage_holin_Dp1 PF16938 Family 5 128 62.1 36 71.21 Changed Putative phage holin Dp-1
Phage_holin_T PF11031 Family 2 107 203.2 40 97.04 Changed Bacteriophage T holin
Phage_HP1_Orf24 PF10772 Family 6 65 133.6 50 89.08 Changed Bacteriophage HP1, Orf24
Phage_hub_GP28 PF11110 Family 1 74 141.3 39 72.88 Changed Baseplate hub distal subunit
Phage_H_T_join PF05521 Family 122 2386 97 19 86.22 Changed Phage head-tail joining protein
Phage_integrase PF00589 Family 24 70631 169.9 19 49.35 Changed Phage integrase family
Phage_integr_3 PF16795 Domain 10 80 155.3 24 51.83 Changed Archaeal phage integrase
Phage_int_SAM_1 PF02899 Domain 23 18001 83.6 23 26.65 Changed Phage integrase, N-terminal SAM-like domain
Phage_int_SAM_2 PF12834 Domain 7 339 87.1 27 29.37 Changed Phage integrase, N-terminal
Phage_int_SAM_3 PF14659 Domain 58 8289 57.4 20 14.95 Changed Phage integrase, N-terminal SAM-like domain
Phage_int_SAM_4 PF13495 Domain 35 5048 83.3 19 27.27 Changed Phage integrase, N-terminal SAM-like domain
Phage_int_SAM_5 PF13102 Domain 127 6426 103.6 16 26.76 Changed Phage integrase SAM-like domain
Phage_int_SAM_6 PF18644 Domain 15 60 131.9 49 37.34 Changed Phage integrase SAM-like domain
Phage_lambda_P PF06992 Family 18 290 147.1 25 67.69 Changed Replication protein P
Phage_lysis PF03245 Domain 7 508 125.2 26 80.22 Changed Bacteriophage Rz lysis protein
Phage_lysozyme PF00959 Domain 14 3159 112.7 23 51.99 Changed Phage lysozyme
Phage_lysozyme2 PF18013 Domain 56 662 143.8 22 24.16 Changed Phage tail lysozyme
Phage_mat-A PF03863 Family 2 16 275.4 20 69.21 Changed Phage maturation protein
Phage_min_cap2 PF06152 Family 20 537 320 20 70.3 Changed Phage minor capsid protein 2
Phage_min_tail PF05939 Family 24 426 106.8 29 80.95 Changed Phage minor tail protein
Phage_MS2_lysis PF11125 Family 1 3 54 40 80.6 Changed Bacteriophage MS2, lysis protein
Phage_Mu_F PF04233 Family 13 2341 117.7 19 28.66 Changed Phage Mu protein F like protein
Phage_Mu_Gam PF07352 Family 45 366 147.7 21 84.13 Changed Bacteriophage Mu Gam like protein
Phage_Mu_Gp27 PF11985 Family 43 427 169.6 22 92.33 Changed Bacteriophage Mu, Gp27
Phage_Mu_Gp36 PF07030 Family 52 677 125.4 23 85.85 Changed Bacteriophage Mu, Gp36
Phage_Mu_Gp37 PF08873 Domain 10 123 169.9 21 88.33 Changed Bacteriophage Mu, Gp37
Phage_Mu_Gp45 PF06890 Domain 63 284 67 31 31.52 Changed Bacteriophage Mu Gp45 spike protein
Phage_Mu_Gp48 PF10076 Family 20 764 157.8 21 74.02 Changed Bacteriophage Mu-like, Gp48
Phage_NinH PF06322 Family 2 98 59.5 62 88.08 Changed Phage NinH protein
Phage_Nu1 PF07471 Family 3 189 139.4 22 77.34 Changed Phage DNA packaging protein Nu1
Phage_ORF5 PF20577 Domain 89 111 74.5 24 83.53 New Phage ORF5 protein
Phage_Orf51 PF06194 Family 2 92 79.2 85 97.77 Changed Phage Conserved Open Reading Frame 51
Phage_P22_NinX PF10765 Family 9 218 106.4 22 83.04 Changed Bacteriophage P22, NinX
Phage_P2_GpE PF06528 Family 14 236 36.5 46 74.81 Changed Phage P2 GpE
Phage_P2_GpU PF06995 Family 77 808 118.7 26 73.43 Changed Phage P2 GpU
Phage_portal PF04860 Family 244 4485 313.4 20 75.65 Changed Phage portal protein
Phage_portal_2 PF05136 Family 81 1387 331.3 26 67.53 Changed Phage portal protein, lambda family
Phage_pRha PF09669 Family 94 1295 86.3 26 38.42 Changed Phage regulatory protein Rha (Phage_pRha)
Phage_prot_Gp6 PF05133 Family 45 2276 410.6 14 87.12 Changed Phage portal protein, SPP1 Gp6-like
Phage_r1t_holin PF16945 Family 7 556 69.2 34 83.9 Changed Putative lactococcus lactis phage r1t holin
Phage_rep_O PF04492 Family 18 332 94.7 28 33.34 Changed Bacteriophage replication protein O
Phage_rep_org_N PF09681 Family 9 640 117.7 30 44.28 Changed N-terminal phage replisome organiser (Phage_rep_org_N)
Phage_RpbA PF10789 Family 8 77 101.9 34 84.93 Changed Phage RNA polymerase binding, RpbA
Phage_sheath_1 PF04984 Domain 35 3102 168.1 19 33.09 Changed Phage tail sheath protein subtilisin-like domain
Phage_sheath_1C PF17482 Domain 39 3092 107.1 25 21.03 Changed Phage tail sheath C-terminal domain
Phage_sheath_1N PF17481 Domain 30 343 143.4 26 28.4 Changed Phage tail sheath protein beta-sandwich domain
Phage_spike PF18715 Repeat 67 200 57.2 34 26.89 Changed Phage spike trimer
Phage_spike_2 PF18781 Repeat 2 2 77 34 10.76 Changed Phage spike trimer
Phage_SSB PF16773 Domain 2 56 115.4 70 96.33 Changed Lactococcus phage single-stranded DNA binding protein
Phage_stabilise PF11134 Family 4 86 415.8 39 89.72 Changed Phage stabilisation protein
Phage_T4_gp19 PF06841 Family 55 2994 137.7 24 86.04 Changed T4-like virus tail tube protein gp19
Phage_T4_Gp30_7 PF06919 Family 1 40 119.9 61 99.36 Changed Phage Gp30.7 protein
Phage_T4_gp36 PF03903 Family 4 203 102 24 28 Changed Phage T4 tail fibre
Phage_T4_Ndd PF06591 Family 2 54 148.1 46 98.29 Changed T4-like phage nuclear disruption protein (Ndd)
Phage_T7_55 PF11247 Family 2 62 97.6 40 95.96 Changed Bacteriophage T7, gene 5.5
Phage_T7_Capsid PF05396 Family 11 259 179 25 65.03 Changed Phage T7 capsid assembly protein
Phage_T7_Gp13 PF11090 Family 5 130 85.2 42 58.89 Changed Bacteriophage T7, probable scaffold protein Gp13
Phage_T7_tail PF03906 Family 3 348 149.1 24 24.2 Changed Phage T7 tail fibre protein
Phage_TAC_1 PF06222 Family 6 71 126.5 45 89.53 Changed Phage tail assembly chaperone
Phage_TAC_10 PF10963 Family 6 67 82.4 36 87.48 Changed Phage tail assembly chaperone
Phage_TAC_11 PF11836 Family 49 991 96 33 84.24 Changed Phage tail tube protein, GTA-gp10
Phage_TAC_12 PF12363 Family 14 308 110.4 24 81.8 Changed Phage tail assembly chaperone protein, TAC
Phage_TAC_13 PF16459 Family 16 72 97.2 30 77.3 Changed Phage tail assembly chaperone, TAC
Phage_TAC_14 PF16462 Family 2 32 113 47 86.09 Changed Phage tail assembly chaperone protein, TAC
Phage_TAC_2 PF06894 Family 4 56 121.8 48 87.81 Changed Bacteriophage lambda tail assembly chaperone, TAC, protein G
Phage_TAC_3 PF06896 Family 4 114 113.3 38 89.85 Changed Phage tail assembly chaperone proteins, TAC
Phage_TAC_4 PF08748 Domain 16 246 102.4 24 86.82 Changed Phage tail assembly chaperone
Phage_TAC_5 PF08890 Family 40 451 130.3 24 92.96 Changed Phage XkdN-like tail assembly chaperone protein, TAC
Phage_TAC_6 PF09550 Family 15 722 56.7 38 79.14 Changed Phage tail assembly chaperone protein, TAC
Phage_TAC_7 PF10109 Family 40 822 81.2 22 76.05 Changed Phage tail assembly chaperone proteins, E, or 41 or 14
Phage_TAC_8 PF10666 Family 1 6 140 96 100 Changed Phage tail assembly chaperone protein Gp14 ()A118
Phage_TAC_9 PF10876 Family 3 28 130.2 36 92.58 Changed Phage tail assembly chaperone protein, TAC
Phage_tail_2 PF06199 Family 28 1433 132.3 27 86.96 Changed Phage tail tube protein
Phage_tail_3 PF08813 Family 11 281 150.1 24 78.87 Changed Phage tail tube protein, TTP
Phage_tail_APC PF16778 Domain 22 229 62.1 34 45.57 Changed Phage tail assembly chaperone protein
Phage_tail_L PF05100 Family 5 473 202.2 34 81.5 Changed Phage minor tail protein L
phage_tail_N PF08400 Family 3 92 131.9 46 22.65 Changed Prophage tail fibre N-terminal
Phage_tail_NK PF16532 Domain 1 31 153.3 47 74.23 Changed Sf6-type phage tail needle knob or tip of some Caudovirales
Phage_tail_S PF05069 Family 18 1139 139.6 19 90.51 Changed Phage virion morphogenesis family
Phage_tail_T PF06223 Family 5 59 95.7 55 79.41 Changed Minor tail protein T
Phage_tail_U PF06141 Family 6 77 125.1 49 97.12 Changed Phage minor tail protein U
Phage_tail_X PF05489 Domain 9 776 59.3 31 77.25 Changed Phage Tail Protein X
Phage_terminase PF10668 Domain 2 245 65.1 33 25.03 Changed Phage terminase small subunit
Phage_term_sma PF07141 Family 2 49 170.9 81 97.83 Changed Putative bacteriophage terminase small subunit
Phage_term_smal PF05944 Family 26 325 130.3 34 53.64 Changed Phage small terminase subunit
Phage_Treg PF04761 Family 2 27 56.5 74 96.89 Changed Lactococcus bacteriophage putative transcription regulator
Phage_TTP_1 PF04630 Family 14 362 179.8 20 87.16 Changed Phage tail tube protein
Phage_TTP_11 PF16460 Family 2 58 133.7 38 83.1 Changed Phage tail tube, TTP, lambda-like
Phage_TTP_12 PF16461 Family 11 280 130.3 23 74.74 Changed Lambda phage tail tube protein, TTP
Phage_TTP_13 PF16463 Family 1 38 132.4 57 75.79 Changed Phage tail tube protein family
Phage_tube PF04985 Family 75 824 161 26 96.16 Changed Phage tail tube protein FII
Phage_tube_2 PF18906 Family 138 902 304.8 19 91.29 Changed Phage tail tube protein
Phage_tube_C PF20608 Domain 9 59 80.2 57 18.12 New Phage tail tube protein C-terminal domain
Phage_X PF05155 Family 7 95 82.3 27 24.22 Changed Phage X family
Phage_XkdX PF09693 Family 33 350 38.8 32 75.67 Changed Phage uncharacterised protein (Phage_XkdX)
PhaG_MnhG_YufB PF03334 Family 408 4447 80.9 33 66.52 Changed Na+/H+ antiporter subunit
PhaP_Bmeg PF09602 Family 4 73 159.6 22 89.4 Changed Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg)
Phasin PF05597 Family 27 855 109.6 23 72.68 Changed Poly(hydroxyalcanoate) granule associated protein (phasin)
Phasin_2 PF09361 Domain 203 3750 98.9 17 60.78 Changed Phasin protein
PHAT PF09246 Repeat 2 83 105.5 37 12.45 Changed PHAT
PHAX_RNA-bd PF10258 Domain 51 920 78.6 38 20.03 Changed Phosphorylated adapter RNA export protein, RNA-binding domain
PHA_gran_rgn PF09650 Family 37 832 91.4 26 90.83 Changed Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn)
PHA_synth_III_E PF09712 Family 17 384 214.4 18 73.43 Changed Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E)
PHBC_N PF12551 Family 56 706 42.4 43 7.2 Changed Poly-beta-hydroxybutyrate polymerase N terminal
PHB_acc PF05233 Domain 81 2222 39.9 35 25.89 Changed PHB accumulation regulatory domain
PHB_acc_N PF07879 Domain 61 1989 60.8 57 32.54 Changed PHB/PHA accumulation regulator DNA-binding domain
PHB_depo_C PF06850 Family 9 1954 201 49 47.38 Changed PHB de-polymerase C-terminus
PHC2_SAM_assoc PF16616 Disordered 10 846 112.6 48 14.16 Changed Unstructured region on Polyhomeotic-like protein 1 and 2
PHD PF00628 Domain 71 64429 50 31 5.42 Changed PHD-finger
PHD20L1_u1 PF16660 Disordered 2 367 96.3 91 10.02 Changed PHD finger protein 20-like protein 1
PhdYeFM_antitox PF02604 Domain 71 10568 70 18 78.92 Changed Antitoxin Phd_YefM, type II toxin-antitoxin system
PHD_2 PF13831 Family 21 9826 35.5 49 3.35 Changed PHD-finger
PHD_3 PF13922 Domain 6 1110 64.2 55 4.22 Changed PHD domain of transcriptional enhancer, Asx
PHD_4 PF16866 Domain 25 2309 65.4 53 6.29 Changed PHD-finger
PHD_like PF12910 Domain 7 128 133.9 26 93.91 Changed Antitoxin of toxin-antitoxin, RelE / RelB, TA system
PHD_Oberon PF07227 Family 28 1926 123.4 37 18.13 Changed PHD - plant homeodomain finger protein
Phenol_Hydrox PF02332 Domain 72 1120 226.1 24 52.36 Changed Methane/Phenol/Toluene Hydroxylase
Phenol_hyd_sub PF06099 Family 11 193 56 43 64.14 Changed Phenol hydroxylase subunit
Phenol_MetA_deg PF13557 Family 144 2611 233 13 75.2 Changed Putative MetA-pathway of phenol degradation
Phenol_monoox PF04663 Family 12 226 65.5 40 54.59 Changed Phenol hydroxylase conserved region
Phenyl_P_gamma PF09662 Family 2 3 83 80 98.03 Changed Phenylphosphate carboxylase gamma subunit (Phenyl_P_gamma)
Pheromone PF08015 Family 38 78 58.7 24 81.58 Changed Fungal mating-type pheromone
PheRS_DBD1 PF18552 Domain 35 904 58.1 37 11.86 Changed PheRS DNA binding domain 1
PheRS_DBD2 PF18554 Domain 43 574 32.7 47 6.41 Changed PheRS DNA binding domain 2
PheRS_DBD3 PF18553 Domain 83 1767 57.8 37 11.37 Changed PheRS DNA binding domain 3
PhetRS_B1 PF18262 Domain 8 1972 84.2 53 14.15 Changed Phe-tRNA synthetase beta subunit B1 domain
Phe_hydrox_dim PF07976 Family 242 3114 166.2 25 25.7 Changed Phenol hydroxylase, C-terminal dimerisation domain
Phe_tRNA-synt_N PF02912 Domain 711 7884 68.7 30 19.87 Changed Aminoacyl tRNA synthetase class II, N-terminal domain
Phe_ZIP PF08916 Domain 27 1052 56.5 50 8.63 Changed Phenylalanine zipper
PHF12_MRG_bd PF16737 Domain 15 563 39.2 68 4.44 Changed PHD finger protein 12 MRG binding domain
PHF5 PF03660 Family 39 1632 100.1 75 75.63 Changed PHF5-like protein
Phg_2220_C PF09524 Domain 22 358 72.6 46 27.43 Changed Conserved phage C-terminus (Phg_2220_C)
Phi-29_GP16_7 PF06720 Family 1 24 129.5 40 95.43 Changed Bacteriophage phi-29 early protein GP16.7
Phi-29_GP3 PF05435 Family 2 28 198.6 32 75.15 Changed Phi-29 DNA terminal protein GP3
Phi-29_GP4 PF05464 Family 1 11 124.6 54 98.56 Changed Phi-29-like late genes activator (early protein GP4)
Phi29_Phage_SSB PF17427 Family 3 19 125.8 28 83.95 Changed Phage Single-stranded DNA-binding protein
phiKZ_IP PF12699 Family 14 101 290 13 63.98 Changed phiKZ-like phage internal head proteins
Phi_1 PF04674 Family 81 2281 245 43 81.11 Changed Phosphate-induced protein 1 conserved region
PHL PF20474 Domain 54 349 144.6 44 12.49 New PHL domain
Phlebovirus_G1 PF07243 Family 4 63 448.4 24 38.6 Changed Phlebovirus glycoprotein G1
Phlebovirus_G2 PF07245 Family 59 523 232.1 21 23.91 Changed Phlebovirus glycoprotein G2 fusion domain
Phlebovirus_NSM PF07246 Family 3 30 250.7 16 20.1 Changed Phlebovirus nonstructural protein NS-M
Phlebo_G2_C PF19019 Domain 4 102 152.7 22 14.41 Changed Phlebovirus glycoprotein G2 C-terminal domain
PHM7_cyt PF14703 Domain 179 9729 170.8 20 21.2 Changed Cytosolic domain of 10TM putative phosphate transporter
PHM7_ext PF12621 Family 156 1986 93.1 27 9.67 Changed Extracellular tail, of 10TM putative phosphate transporter
PhnG PF06754 Family 77 1053 140.7 37 93.1 Changed Phosphonate metabolism protein PhnG
PhnH PF05845 Family 77 1071 184.8 33 93.79 Changed Bacterial phosphonate metabolism protein (PhnH)
PhnI PF05861 Family 51 1065 349.7 55 96.16 Changed Bacterial phosphonate metabolism protein (PhnI)
PhnJ PF06007 Family 35 1050 271.2 65 90.88 Changed Phosphonate metabolism protein PhnJ
PHO4 PF01384 Family 768 15600 288.6 24 85.07 Changed Phosphate transporter family
Pho86 PF11124 Family 29 81 283.2 27 91.3 Changed Inorganic phosphate transporter chaperone Pho86
Pho88 PF10032 Family 88 1012 175.3 39 84.64 Changed Phosphate transport (Pho88)
PhoD PF09423 Domain 74 7357 324.8 22 58.55 Changed PhoD-like phosphatase
PhoD_2 PF19050 Domain 19 3535 237.2 20 44.91 Changed PhoD related phosphatase
PhoD_N PF16655 Domain 134 4398 96.8 37 17.16 Changed PhoD-like phosphatase, N-terminal domain
PhoH PF02562 Domain 109 11797 203.8 45 55.17 Changed PhoH-like protein
PhoLip_ATPase_C PF16212 Family 560 18992 228.7 30 19.96 Changed Phospholipid-translocating P-type ATPase C-terminal
PhoLip_ATPase_N PF16209 Family 229 17074 68.6 37 5.79 Changed Phospholipid-translocating ATPase N-terminal
PhoPQ_related PF10142 Family 17 436 304.8 27 67.48 Changed PhoPQ-activated pathogenicity-related protein
PhoQ_Sensor PF08918 Domain 11 128 168.9 54 37.47 Changed PhoQ Sensor
PhoR PF11808 Family 70 1238 86 25 19.83 Changed Phosphate regulon sensor protein PhoR
Phosducin PF02114 Domain 2 3568 194.4 23 73.57 Changed Phosducin
Phosphatase PF15698 Family 19 695 252.9 55 95.04 Changed Phosphatase
PhosphMutase PF10143 Family 262 1497 167.6 32 40.24 Changed 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Phosphodiest PF01663 Family 67 20702 277.4 15 47.85 Changed Type I phosphodiesterase / nucleotide pyrophosphatase
Phosphoesterase PF04185 Family 20 7673 318.9 21 60.33 Changed Phosphoesterase family
Phospholamban PF04272 Domain 2 222 51.9 80 90.08 Changed Phospholamban
Phospholip_A2_1 PF00068 Domain 111 2982 105.6 35 58.05 Changed Phospholipase A2
Phospholip_A2_2 PF05826 Domain 78 1569 90.7 34 28.72 Changed Phospholipase A2
Phospholip_A2_3 PF09056 Domain 58 776 107.1 38 42.91 Changed Prokaryotic phospholipase A2
Phospholip_A2_4 PF08398 Domain 9 651 75.6 33 17.89 Changed Phospholipase A2-like domain
Phospholip_B PF04916 Family 17 1856 378.1 34 81.73 Changed Phospholipase B
Phosphonate-bd PF12974 Family 86 7198 239.8 18 70.48 Changed ABC transporter, phosphonate, periplasmic substrate-binding protein
Phosphoprotein PF00922 Family 3 15 166.6 53 98.81 Changed Vesiculovirus phosphoprotein
Phosphorylase PF00343 Family 485 11375 536.1 36 73.83 Changed Carbohydrate phosphorylase
Phospho_p8 PF10195 Family 25 499 56.1 45 61.71 Changed DNA-binding nuclear phosphoprotein p8
Phostensin PF13914 Domain 9 506 123.5 42 19.11 Changed Phostensin PP1-binding and SH3-binding region
Phostensin_N PF13916 Domain 5 410 76.8 35 13.88 Changed PP1-regulatory protein, Phostensin N-terminal
Phos_pyr_kin PF08543 Family 117 13462 229.3 27 72.01 Changed Phosphomethylpyrimidine kinase
Photo_RC PF00124 Family 41 2370 230.9 37 80.05 Changed Photosynthetic reaction centre protein
PhoU PF01895 Domain 226 20316 87.2 23 51.34 Changed PhoU domain
PhoU_div PF01865 Family 7 3787 204.4 24 93 Changed Protein of unknown function DUF47
PHP PF02811 Family 478 27454 190.4 16 25.6 Changed PHP domain
PHP_C PF13263 Domain 89 1790 52.1 24 18 Changed PHP-associated
PHR PF08005 Domain 60 4430 147.8 39 11.31 Changed PHR domain
PhrC_PhrF PF11131 Family 2 3 35 43 69.08 Changed Rap-phr extracellular signalling
PHTB1_C PF14728 Family 20 931 316.9 42 41.31 Changed PTHB1 C-terminus
PHTB1_N PF14727 Repeat 32 991 355.6 46 48.35 Changed PTHB1 N-terminus
PHtD_u1 PF16645 Disordered 4 10 60.5 50 9.68 Changed Unstructured region on Pneumococcal histidine triad protein
PHTF1-2_N PF12129 Domain 16 1318 140.5 63 19.9 Changed Homeodomain containing protein PHTF1/2, N-terminal
PHY PF00360 Domain 27 3463 176.1 27 18.28 Changed Phytochrome region
Phycobilisome PF00502 Domain 132 1889 142.3 28 64.12 Changed Phycobilisome protein
Phycoerythr_ab PF02972 Family 5 21 56.5 49 42.57 Changed Phycoerythrin, alpha/beta chain
PhyH PF05721 Domain 39 17077 207.2 16 66.57 Changed Phytanoyl-CoA dioxygenase (PhyH)
PHYHIP_C PF19281 Family 5 824 211.4 63 58.95 Changed Phytanoyl-CoA hydroxylase-interacting protein C-terminus
Phytase PF02333 Repeat 3 1393 283.2 26 68.43 Changed Phytase
Phytase-like PF13449 Repeat 247 4348 293.8 20 59.62 Changed Esterase-like activity of phytase
Phyto-Amp PF15438 Family 2 3 104.3 30 82.15 Changed Antigenic membrane protein of phytoplasma
Phytochelatin PF05023 Domain 63 1168 181.7 41 48.47 Changed Phytochelatin synthase
Phytochelatin_C PF09328 Family 9 558 199.8 45 51.6 Changed Domain of unknown function (DUF1984)
Phytoreo_P8 PF07124 Family 2 3 422 53 100 Changed Phytoreovirus outer capsid protein P8
Phytoreo_Pns PF05451 Family 2 3 352 41 98.69 Changed Phytoreovirus nonstructural protein Pns10/11
Phytoreo_S7 PF07236 Family 2 4 405.5 24 63.46 Changed Phytoreovirus S7 protein
Phyto_Pns9_10 PF05878 Family 2 3 298.7 30 92.85 Changed Phytoreovirus nonstructural protein Pns9/Pns10
PHZA_PHZB PF03284 Domain 3 116 153.7 44 89.93 Changed Phenazine biosynthesis protein A/B
PhzC-PhzF PF02567 Family 11 9437 247.5 26 90.49 Changed Phenazine biosynthesis-like protein
PH_10 PF15411 Domain 127 1488 120.8 32 12.07 Changed Pleckstrin homology domain
PH_11 PF15413 Domain 6 1374 121.5 39 16.37 Changed Pleckstrin homology domain
PH_12 PF16457 Domain 60 5509 122.5 32 14.03 Changed Pleckstrin homology domain
PH_13 PF16652 Domain 10 1926 147.6 50 10.62 Changed Pleckstrin homology domain
PH_14 PF17787 Domain 7 2906 113.8 40 11 Changed PH domain
PH_15 PF17339 Domain 8 46 92.2 30 35.38 Changed PH domain
PH_16 PF17838 Domain 9 5382 120.6 42 8.95 Changed PH domain
PH_17 PF18012 Domain 8 1117 57.2 46 11.91 Changed PH domain
PH_18 PF18469 Domain 26 105 140.9 27 31.85 Changed Pleckstrin homology domain
PH_19 PF19057 Domain 14 3394 132.1 28 11.28 Changed PH domain
PH_2 PF08458 Domain 41 1464 99.4 40 23.58 Changed Plant pleckstrin homology-like region
PH_20 PF20399 Domain 94 1467 82 41 12.04 New PH domain
PH_3 PF14593 Domain 22 1426 101.1 48 19 Changed PH domain
PH_4 PF15404 Domain 33 512 156.4 33 15.25 Changed Pleckstrin homology domain
PH_5 PF15405 Domain 35 1922 136.3 27 10.95 Changed Pleckstrin homology domain
PH_6 PF15406 Domain 11 443 108 47 18.76 Changed Pleckstrin homology domain
PH_8 PF15409 Domain 11 3192 89.1 47 10.33 Changed Pleckstrin homology domain
PH_9 PF15410 Domain 10 6526 111.4 34 7.06 Changed Pleckstrin homology domain
PH_BEACH PF14844 Domain 27 6913 94.5 29 3.49 Changed PH domain associated with Beige/BEACH
PH_RBD PF12068 Domain 5 3357 148.8 31 18.17 Changed Rab-binding domain (RBD)
PH_TFIIH PF08567 Domain 90 1527 85.8 32 13.83 Changed TFIIH p62 subunit, N-terminal domain
PI-PLC-C1 PF16670 Domain 44 694 267.3 28 69.64 Changed Phosphoinositide phospholipase C, Ca2+-dependent
PI-PLC-X PF00388 Family 101 15182 144.7 42 15.62 Changed Phosphatidylinositol-specific phospholipase C, X domain
PI-PLC-Y PF00387 Family 298 13199 111.9 42 11.1 Changed Phosphatidylinositol-specific phospholipase C, Y domain
PI-TkoII_IV PF18714 Domain 2 3 149.3 39 9.38 Changed DNA polymerase II intein Domain IV
PI31_Prot_C PF08577 Family 68 1094 79.4 39 23.87 Changed PI31 proteasome regulator
PI31_Prot_N PF11566 Family 97 1862 143.2 23 40.97 Changed PI31 proteasome regulator N-terminal
PI3Ka PF00613 Repeat 12 8471 179.2 26 14.04 Changed Phosphoinositide 3-kinase family, accessory domain (PIK domain)
PI3K_1B_p101 PF10486 Family 15 1475 375.5 22 89.72 Changed Phosphoinositide 3-kinase gamma adapter protein p101 subunit
PI3K_C2 PF00792 Domain 16 5739 137.7 24 12.56 Changed Phosphoinositide 3-kinase C2
PI3K_p85B PF02192 Family 35 1832 74.8 50 7.56 Changed PI3-kinase family, p85-binding domain
PI3K_P85_iSH2 PF16454 Domain 21 2173 162.7 67 27.71 Changed Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain
PI3K_rbd PF00794 Domain 12 3759 104.1 25 8.58 Changed PI3-kinase family, ras-binding domain
PI3_PI4_kinase PF00454 Family 41 27225 205.2 22 13.49 Changed Phosphatidylinositol 3- and 4-kinase
PI4K_N PF19274 Family 19 3460 523.6 20 44.35 Changed PI4-kinase N-terminal region
Picorna_P3A PF06363 Family 2 2 91 32 4.22 Changed Picornaviridae P3A protein
Pico_P1A PF02226 Family 2 9 66.3 54 5.37 Changed Picornavirus coat protein (VP4)
Pico_P2A PF00947 Domain 9 8 103.5 50 8.05 Changed Picornavirus core protein 2A
Pico_P2B PF01552 Family 2 7 100.4 48 7.01 Changed Picornavirus 2B protein
PID PF00640 Domain 17 19886 128.2 21 20.37 Changed Phosphotyrosine interaction domain (PTB/PID)
PID_2 PF14719 Domain 8 1585 164.9 33 52.41 Changed Phosphotyrosine interaction domain (PTB/PID)
PIEZO PF15917 Family 34 1853 182.9 39 8.78 Changed Piezo
Piezo_RRas_bdg PF12166 Family 72 2688 337.1 38 17.77 Changed Piezo non-specific cation channel, R-Ras-binding domain
PIF PF05092 Family 4 37 425.7 28 79.13 Changed Per os infectivity
PIF1 PF05970 Family 12 16073 179 18 33.47 Changed PIF1-like helicase
PIF2 PF04631 Family 4 36 354.1 35 92.6 Changed Per os infectivity factor 2
PIF3 PF05006 Family 6 39 142.6 29 69.08 Changed Per os infectivity factor 3
PIF6 PF05341 Family 4 23 106.1 36 76.61 Changed Per os infectivity factor 6
PIG-F PF06699 Family 82 1549 180 29 67.47 Changed GPI biosynthesis protein family Pig-F
PIG-H PF10181 Family 92 1384 67.6 35 30.51 Changed GPI-GlcNAc transferase complex, PIG-H component
PIG-L PF02585 Family 66 15328 137.5 25 40.55 Changed GlcNAc-PI de-N-acetylase
PIG-P PF08510 Family 135 1620 126.2 33 49.08 Changed PIG-P
PIG-S PF10510 Family 96 1950 429.6 25 86.6 Changed Phosphatidylinositol-glycan biosynthesis class S protein
PIG-U PF06728 Family 51 2115 319.7 32 83 Changed GPI transamidase subunit PIG-U
PIG-X PF08320 Domain 93 1542 190.7 23 52.06 Changed PIG-X / PBN1
PIG-Y PF15159 Family 134 943 73.8 38 31.44 Changed Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y
PIGA PF08288 Family 21 1841 88.4 57 18.49 Changed PIGA (GPI anchor biosynthesis)
Pigment_DH PF06324 Family 2 81 17.9 80 16.38 Changed Pigment-dispersing hormone (PDH)
PigN PF04987 Family 154 2268 378.7 30 46.9 Changed Phosphatidylinositolglycan class N (PIG-N)
PIGO_PIGG PF19316 Family 65 1942 331.6 19 40.26 Changed GPI ethanolamine phosphate transferase membrane region
PIH1 PF08190 Domain 15 1796 150.3 23 32.39 Changed PIH1 N-terminal domain
PIH1_CS PF18201 Domain 15 1745 92.9 26 21.24 Changed PIH1 CS-like domain
Pih1_fungal_CS PF18482 Domain 18 49 89.1 27 26.51 Changed Fungal Pih1 CS domain
Pik1 PF11522 Family 18 404 50.7 50 5.07 Changed Yeast phosphatidylinositol-4-OH kinase Pik1
PIK3CG_ABD PF19710 Domain 10 523 178.2 53 16.86 Changed PIK3 catalytic subunit gamma adaptor-binding domain
Pil1 PF13805 Family 22 1546 246.2 40 52.64 Changed Eisosome component PIL1
PilA4 PF18682 Domain 11 23 82.9 29 51.37 Changed Pilin A4
PilI PF10623 Family 2 2 78 21 40.31 Changed Plasmid conjugative transfer protein PilI
Pilin PF00114 Domain 140 1639 112.8 20 66.03 Changed Pilin (bacterial filament)
Pilin_GH PF16734 Family 41 341 115.1 24 56.56 Changed Type IV pilin-like G and H, putative
Pilin_N PF07790 Family 36 813 81.4 28 37.64 Changed Archaeal Type IV pilin, N-terminal
Pilin_PilA PF14245 Family 6 35 127.8 32 57.51 Changed Type IV pilin PilA
Pilin_PilX PF11530 Family 2 8 121.6 37 77.22 Changed Minor type IV pilin, PilX
PilJ PF13675 Domain 63 2504 108.4 17 22.35 Changed Type IV pili methyl-accepting chemotaxis transducer N-term
PilJ_C PF18223 Domain 7 32 95.1 21 30.14 Changed Pili PilJ C-terminal domain
PilM PF07419 Family 8 78 133.7 22 91.53 Changed PilM
PilM_2 PF11104 Family 14 3407 274.5 21 76.41 Changed Type IV pilus assembly protein PilM;
PilN PF05137 Family 117 2514 82 21 34.01 Changed Fimbrial assembly protein (PilN)
PilN_bio_d PF18222 Domain 11 26 103.1 43 44.67 Changed PilN biogenesis protein dimerization domain
PilO PF04350 Family 44 1738 142.3 26 66.66 Changed Pilus assembly protein, PilO
Pilosulin PF17499 Family 5 8 67.1 30 77.04 Changed Ant venom peptides
PilP PF04351 Family 95 1262 141.9 30 78.1 Changed Pilus assembly protein, PilP
PilS PF08805 Domain 5 222 132.9 19 65.2 Changed PilS N terminal
Pilt PF15453 Family 7 662 181.2 37 52.34 Changed Protein incorporated later into Tight Junctions
Pilus_CpaD PF09476 Family 36 717 183.7 27 83.9 Changed Pilus biogenesis CpaD protein (pilus_cpaD)
PilW PF16074 Family 41 1236 130.4 19 39.38 Changed Type IV Pilus-assembly protein W
PilX PF13681 Domain 52 523 121 17 60.1 Changed Type IV pilus assembly protein PilX C-term
PilX_N PF14341 Family 41 1004 50.7 33 22.28 Changed PilX N-terminal
PilZ PF07238 Domain 190 13961 100.4 15 40.35 Changed PilZ domain
PilZN PF07317 Domain 53 639 105.2 22 41.17 Changed Flagellar regulator YcgR, PilZN domain
PilZN1 PF18672 Domain 8 29 92.9 28 30.07 Changed N-terminal PilZ-like domain PilZN1
PilZN3 PF20424 Domain 31 36 135.4 36 46.32 New PilZN3 domain
PilZNR PF12945 Family 157 1305 86.4 19 36.97 Changed Flagellar protein YcgR
Pim PF16765 Family 1 2 94.5 31 59.62 Changed Pesticin immunity protein
PIN PF01850 Domain 108 19626 121.8 16 87.76 Changed PIN domain
PIN7 PF18475 Domain 29 289 100.4 29 38.66 Changed PIN domain
Pinin_SDK_memA PF04696 Family 89 1594 120.3 30 27.34 Changed pinin/SDK/memA/ protein conserved region
Pinin_SDK_N PF04697 Family 5 460 118.9 60 21.56 Changed pinin/SDK conserved region
PINIT PF14324 Domain 143 3078 147.2 41 24.76 Changed PINIT domain
PIN_10 PF18478 Domain 29 315 80.9 24 60.62 Changed PIN like domain
PIN_11 PF18479 Domain 3 330 111.4 77 11.3 Changed PIN like domain
PIN_12 PF16289 Domain 53 398 165.8 16 48.75 Changed PIN domain
PIN_2 PF10130 Domain 12 242 121.1 23 89.52 Changed PIN domain
PIN_3 PF13470 Domain 52 3718 110.2 21 70.11 Changed PIN domain
PIN_4 PF13638 Domain 86 8559 139.8 24 20.23 Changed PIN domain
PIN_5 PF08745 Family 35 126 201.3 42 93.26 Changed PINc domain ribonuclease
PIN_6 PF17146 Domain 263 1960 86.2 38 19.87 Changed PIN domain of ribonuclease
PIN_8 PF18476 Domain 25 271 206.7 25 51.68 Changed PIN like domain
PIN_9 PF18477 Domain 14 283 111.3 35 88.68 Changed PIN like domain
PIP49_C PF12260 Family 29 2504 188.6 27 46.4 Changed Protein-kinase domain of FAM69
PIP49_N PF14875 Domain 24 1351 136.4 40 34.23 Changed N-term cysteine-rich ER, FAM69
PIP5K PF01504 Family 332 16009 217.8 26 29.08 Changed Phosphatidylinositol-4-phosphate 5-Kinase
PipA PF07108 Family 2 20 170.8 34 32.39 Changed PipA protein
PIR PF00399 Repeat 40 2118 16.9 66 19.26 Changed Yeast PIR protein repeat
Pirin PF02678 Family 37 14141 107 35 37.27 Changed Pirin
Pirin_C PF05726 Domain 28 9281 104.2 27 34.03 Changed Pirin C-terminal cupin domain
Pirin_C_2 PF17954 Domain 114 3866 85.8 26 36.23 Changed Quercetinase C-terminal cupin domain
PIRT PF15099 Family 3 277 122.6 47 84.84 Changed Phosphoinositide-interacting protein family
PITH PF06201 Domain 298 3545 144.2 32 53.01 Changed PITH domain
Piwi PF02171 Family 15 14038 265.1 37 34.14 Changed Piwi domain
PixA PF12306 Family 14 132 162.2 22 91.55 Changed Inclusion body protein
PI_PP_C PF18365 Domain 10 21 126.1 26 14.29 Changed Phosphoinositide phosphatase C-terminal domain
PI_PP_I PF18363 Domain 9 22 96.3 29 11.44 Changed Phosphoinositide phosphatase insertion domain
PK PF00224 Domain 11 17227 313.5 40 66.33 Changed Pyruvate kinase, barrel domain
PKAT_KLD PF20433 Domain 32 993 51.1 43 9.31 New PKAT, KLD domain
PKcGMP_CC PF16808 Coiled-coil 8 604 35 59 7.14 Changed Coiled-coil N-terminus of cGMP-dependent protein kinase
PKD PF00801 Domain 42 8597 71.8 20 11.69 Changed PKD domain
PKD_2 PF16407 Family 13 495 158.6 21 31.22 Changed PKD-like family
PKD_3 PF16820 Family 8 212 66.2 23 18.18 Changed PKD-like domain
PKD_4 PF18911 Domain 101 18703 83.1 23 12.59 Changed PKD domain
PKD_5 PF19406 Domain 14 1191 92.9 27 15.55 Changed PKD-like domain
PKD_6 PF19408 Domain 44 1220 84.3 25 12.09 Changed PKD-like domain
PKD_channel PF08016 Family 11 5617 186.6 23 15.8 Changed Polycystin cation channel
PKHD_C PF18331 Domain 119 1267 43.3 45 19.18 Changed PKHD-type hydroxylase C-terminal domain
PKI PF02827 Family 21 1075 66 39 69.74 Changed cAMP-dependent protein kinase inhibitor
pKID PF02173 Family 9 2092 41.4 61 13.84 Changed pKID domain
Pkinase PF00069 Domain 38 636438 241.4 21 36.71 Changed Protein kinase domain
Pkinase_C PF00433 Family 421 24833 43.2 33 6.17 Changed Protein kinase C terminal domain
Pkinase_fungal PF17667 Domain 24 10576 223.7 14 49.41 Changed Fungal protein kinase
Pkip-1 PF06878 Family 19 11 160 34 94.83 Changed Pkip-1 protein
PKK PF12474 Family 56 3373 129.6 36 23.85 Changed Polo kinase kinase
PknG_rubred PF16919 Domain 12 862 124.4 41 15.87 Changed Protein kinase G rubredoxin domain
PknG_TPR PF16918 Repeat 12 1068 310 36 41.74 Changed Protein kinase G tetratricopeptide repeat
PknH_C PF14032 Domain 49 589 183.1 19 67.37 Changed PknH-like extracellular domain
Pkr1 PF08636 Family 75 757 72.7 42 38.79 Changed ER protein Pkr1
PKS_DE PF18369 Domain 127 1777 44.6 44 1.8 Changed Polyketide synthase dimerisation element domain
PK_C PF02887 Domain 599 14885 115.5 29 23.04 Changed Pyruvate kinase, alpha/beta domain
PK_Tyr_Ser-Thr PF07714 Domain 118 212672 234.3 25 34.58 Changed Protein tyrosine and serine/threonine kinase
PL48 PF15903 Family 14 1998 299.2 54 33.88 Changed Filopodia upregulated, FAM65
PLA1 PF02253 Domain 64 1328 246.6 31 73.3 Changed Phospholipase A1
PLA2G12 PF06951 Domain 6 1000 163.8 43 73.65 Changed Group XII secretory phospholipase A2 precursor (PLA2G12)
PLA2_B PF01735 Family 14 5054 340.4 25 54.13 Changed Lysophospholipase catalytic domain
PLA2_inh PF02988 Domain 5 297 80.9 36 37.09 Changed Phospholipase A2 inhibitor
PLAC PF08686 Domain 80 4182 32.3 41 2.91 Changed PLAC (protease and lacunin) domain
PLAC8 PF04749 Family 284 7345 103.2 29 45.88 Changed PLAC8 family
PLAC9 PF15205 Family 6 225 65.1 52 65.49 Changed Placenta-specific protein 9
Planc_extracel PF07595 Motif 22 73 23.2 43 1.35 Changed Planctomycete extracellular
Plant_all_beta PF10532 Domain 10 110 105.8 35 26.6 Changed Plant specific N-all beta domain
Plant_NMP1 PF06694 Family 4 346 237.9 55 85.76 Changed Plant nuclear matrix protein 1 (NMP1)
Plant_tran PF04827 Family 5 3244 107.1 36 41.27 Changed Plant transposon protein
Plant_vir_prot PF01307 Family 9 116 100.2 32 88.89 Changed Plant viral movement protein
Plant_zn_clust PF10533 Domain 34 1450 46.3 52 14.13 Changed Plant zinc cluster domain
Plasmid_parti PF01672 Family 40 39 83.4 40 43.95 Changed Putative plasmid partition protein
Plasmid_RAQPRD PF09686 Family 21 240 77 38 65.51 Changed Plasmid protein of unknown function (Plasmid_RAQPRD)
Plasmid_stab_B PF10784 Family 11 57 70.5 31 51.2 Changed Plasmid stability protein
Plasmodium_HRP PF05403 Disordered 3 19 125.8 59 81.32 Changed Plasmodium histidine-rich protein (HRPII/III)
Plasmodium_Vir PF05795 Family 43 6468 204 10 79.49 Changed Plasmodium vivax Vir protein
Plasmod_dom_1 PF09715 Family 4 84 64.2 39 34.81 Changed Plasmodium protein of unknown function (Plasmod_dom_1)
Plasmod_MYXSPDY PF07981 Repeat 14 1047 16.9 76 92.24 Changed Plasmodium repeat_MYXSPDY
Plasmod_Pvs28 PF06247 Domain 36 139 42.8 31 36.01 Changed Pvs28 EGF domain
Plasmo_rep PF12135 Repeat 3 7 24.6 49 1.9 Changed Plasmodium repeat family
PLAT PF01477 Domain 84 20247 110.8 22 17.83 Changed PLAT/LH2 domain
PLATZ PF04640 Family 57 2641 72.5 52 30.41 Changed PLATZ transcription factor
Plavaka PF18759 Family 339 6577 217.4 19 38.2 Changed Plavaka transposase
PLC-beta_C PF08703 Domain 13 1522 143.9 39 13.89 Changed PLC-beta C terminal
PLCC PF14466 Domain 2 4 124.8 72 80.35 Changed PLAT/LH2 and C2-like Ca2+-binding lipoprotein
PLDc PF00614 Family 30 9384 30.2 43 4.06 Changed Phospholipase D Active site motif
PLDc_2 PF13091 Domain 75 34903 141.2 18 34.02 Changed PLD-like domain
PLDc_3 PF13918 Domain 2 1693 173.5 42 35.12 Changed PLD-like domain
PLDc_N PF13396 Domain 639 8746 44.5 25 15.03 Changed Phospholipase_D-nuclease N-terminal
PLD_C PF12357 Family 94 2376 71.7 44 9.14 Changed Phospholipase D C terminal
Plectin PF00681 Repeat 306 44769 38.2 35 8.54 Changed Plectin repeat
Plexin_cytopl PF08337 Domain 44 5829 471.4 48 30.76 Changed Plexin cytoplasmic RasGAP domain
Plexin_RBD PF20170 Domain 45 5104 112.4 51 6.56 New Plexin cytoplasmic RhoGTPase-binding domain
PliI PF16743 Domain 6 57 102.9 26 48.7 Changed Periplasmic lysozyme inhibitor of I-type lysozyme
PLipase_C_C PF05506 Domain 166 3152 86.6 26 22.38 Changed Bacterial phospholipase C, C-terminal domain
Plk4_PB1 PF18190 Domain 10 658 104.5 53 12.18 Changed Polo-like Kinase 4 Polo Box 1
Plk4_PB2 PF18409 Domain 51 627 107.8 49 12.27 Changed Polo-like Kinase 4 Polo Box 2
PLL PF18587 Domain 25 278 127 57 20.75 Changed PTX/LNS-Like (PLL) domain
PLN_propep PF16485 Domain 12 172 41.7 33 11.8 Changed Protealysin propeptide
Ploopntkinase1 PF18748 Family 3 25 186.1 56 81.3 Changed P-loop Nucleotide Kinase1
Ploopntkinase2 PF18747 Family 3 22 263 57 84.12 Changed P-loop Nucleotide Kinase2
Ploopntkinase3 PF18751 Family 3 31 184.5 46 98.21 Changed P-loop Nucleotide Kinase3
PLRV_ORF5 PF01690 Family 2 56 330.4 30 57.41 Changed Potato leaf roll virus readthrough protein
PLU-1 PF08429 Family 94 4137 305 29 22.16 Changed PLU-1-like protein
Plug PF07715 Domain 617 97946 110.3 21 12.75 Changed TonB-dependent Receptor Plug Domain
Plug_translocon PF10559 Domain 115 3050 34.3 67 7.48 Changed Plug domain of Sec61p
Plus-3 PF03126 Domain 171 3512 102.9 27 13.13 Changed Plus-3 domain
PlyB_C PF18684 Domain 3 22 156.5 55 38.06 Changed Pleurotolysin B C-terminal domain
PM0188 PF11477 Family 3 19 278.9 21 77.4 Changed Sialyltransferase PMO188
PMAIP1 PF15150 Family 7 102 52 61 80.04 Changed Phorbol-12-myristate-13-acetate-induced
PmbA_TldD PF01523 Domain 479 7932 74.6 24 15.9 Changed PmbA/TldA metallopeptidase domain 1
PmbA_TldD_C PF19289 Domain 288 10455 227 28 48.94 Changed PmbA/TldA metallopeptidase C-terminal domain
PmbA_TldD_M PF19290 Domain 491 7360 110.3 21 23.78 Changed PmbA/TldA metallopeptidase central domain
PMBR PF09373 Repeat 49 203 32.3 28 8.71 Changed Pseudomurein-binding repeat
PMC2NT PF08066 Domain 130 1629 90 29 10.88 Changed PMC2NT (NUC016) domain
PMD PF10536 Domain 30 9139 197.1 18 53.03 Changed Plant mobile domain
PMEI PF04043 Domain 629 13776 145.1 18 41.7 Changed Plant invertase/pectin methylesterase inhibitor
PMG PF05287 Family 11 852 144.6 33 89.45 Changed PMG protein
PMI_typeI_C PF01238 Domain 8 1672 47.5 34 10.88 Changed Phosphomannose isomerase type I C-terminal
PMI_typeI_cat PF20511 Domain 8 6581 136.3 30 35.29 New Phosphomannose isomerase type I, catalytic domain
PMI_typeI_hel PF20512 Domain 6 2177 88.9 26 20.38 New Phosphomannose isomerase type I, helical insertion domain
PMM PF03332 Family 9 2994 197.8 44 79.56 Changed Eukaryotic phosphomannomutase
PMP1_2 PF08114 Family 2 61 38.2 44 41.95 Changed ATPase proteolipid family
PMP22_Claudin PF00822 Family 13 13029 163.4 24 72.51 Changed PMP-22/EMP/MP20/Claudin family
Pmp3 PF01679 Family 320 5271 48.5 42 47.47 Changed Proteolipid membrane potential modulator
PMR5N PF14416 Domain 339 9539 54.1 42 12.53 Changed PMR5 N terminal Domain
PmrD PF11183 Family 4 37 78.8 35 85.16 Changed Polymyxin resistance protein PmrD
PMSI1 PF15322 Family 9 116 261 54 79.85 Changed Protein missing in infertile sperm 1, putative
PMSR PF01625 Family 590 14014 148.9 41 68.61 Changed Peptide methionine sulfoxide reductase
PMT PF02366 Family 19 6856 224.6 24 33.71 Changed Dolichyl-phosphate-mannose-protein mannosyltransferase
PMT2_N PF17987 Domain 9 29 122.2 37 28.48 Changed Phosphoethanolamine N-methyltransferase 2 N-terminal
PMT_2 PF13231 Family 32 13765 158.8 17 28.52 Changed Dolichyl-phosphate-mannose-protein mannosyltransferase
PMT_4TMC PF16192 Family 388 5815 196.6 25 28.1 Changed C-terminal four TMM region of protein-O-mannosyltransferase
PND PF17949 Domain 5 339 112.1 55 52.3 Changed FANCM pseudonuclease domain
Pneumovirus_M2 PF06436 Family 2 8 154.4 47 83.11 Changed Pneumovirus matrix protein 2 (M2)
Pneumo_att_G PF05539 Family 3 1 389 100 100 Changed Pneumovirinae attachment membrane glycoprotein G
Pneumo_M2 PF07380 Family 1 3 89 46 98.89 Changed Pneumovirus M2 protein
Pneumo_matrix PF03393 Family 2 8 251.8 51 98.53 Changed Pneumovirus matrix protein
Pneumo_ncap PF03246 Family 2 8 390.5 58 99.55 Changed Pneumovirus nucleocapsid protein
Pneumo_NS1 PF03438 Family 1 3 136 75 98.55 Changed Pneumovirus NS1 protein
Pneumo_phosprot PF02478 Family 2 10 215.1 29 88.16 Changed Pneumovirus phosphoprotein
PNGaseA PF12222 Family 21 1851 371.5 30 64.23 Changed Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A
PNISR PF15996 Family 21 792 159.4 37 20.7 Changed Arginine/serine-rich protein PNISR
PNK3P PF08645 Family 24 2772 153.3 30 38.08 Changed Polynucleotide kinase 3 phosphatase
PNKP-ligase_C PF16536 Domain 29 792 59.7 70 7.22 Changed PNKP adenylyltransferase domain, C-terminal region
PNKP_ligase PF16542 Domain 61 885 299 52 37.8 Changed PNKP adenylyltransferase domain, ligase domain
PNMA PF14893 Family 22 1549 230.9 25 55.68 Changed PNMA
PNPase PF03726 Domain 17 8319 81.2 28 11.12 Changed Polyribonucleotide nucleotidyltransferase, RNA binding domain
PNPase_C PF12111 Domain 15 167 36.6 47 3.61 Changed Polyribonucleotide phosphorylase C terminal
PnpCD_PnpD_N PF18191 Domain 1 65 149.3 64 44.65 Changed Hydroquinone 1,2-dioxygenase large subunit N-terminal
PNP_phzG_C PF10590 Domain 478 7007 43.5 48 18.24 Changed Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
PNP_UDP_1 PF01048 Domain 107 32581 234.3 16 65.77 Changed Phosphorylase superfamily
PNRC PF15365 Motif 97 1923 20 59 7.41 Changed Proline-rich nuclear receptor coactivator motif
Pns11_12 PF17464 Family 2 3 193.7 26 97.98 Changed Non-structural protein 11 and 12
PNTB PF02233 Family 266 5960 431.9 49 72.99 Changed NAD(P) transhydrogenase beta subunit
PNTB_4TM PF12769 Family 183 5464 85.3 51 18.25 Changed 4TM region of pyridine nucleotide transhydrogenase, mitoch
pNTSase1 PF20301 Family 17 24 159.6 35 93.55 New Predicted novel nucleotide synthetase
POB3_N PF17292 Domain 85 1955 92.8 32 14.8 Changed POB3-like N-terminal PH domain
POC1 PF10450 Family 3 56 252.6 22 97.34 Changed POC1 chaperone
POC3_POC4 PF10448 Family 17 106 139.7 17 95.28 Changed 20S proteasome chaperone assembly proteins 3 and 4
PocR PF10114 Domain 195 1435 158.1 20 33 Changed Sensory domain found in PocR
Podoplanin PF05808 Family 9 304 124.7 34 54.66 Changed Podoplanin
Podovirus_Gp16 PF05894 Family 2 54 294.8 33 77.55 Changed Podovirus DNA encapsidation protein (Gp16)
Polbeta PF18765 Domain 77 4801 89.2 20 61.7 Changed Polymerase beta, Nucleotidyltransferase
PolC_DP2 PF03833 Family 61 266 823.6 46 68.08 Changed DNA polymerase II large subunit DP2
Pollen_allerg_2 PF01620 Family 1 75 126.9 51 45.14 Changed Ribonuclease (pollen allergen)
Pollen_Ole_e_1 PF01190 Family 87 4432 91 25 34.66 Changed Pollen protein Ole e 1 like
POLO_box PF00659 Family 198 4426 62.8 27 17.19 Changed POLO box duplicated region
Polo_box_2 PF18531 Domain 3 16 98.6 37 17.64 Changed Polo box domain
Polo_box_3 PF18544 Domain 9 36 93.6 39 14.12 Changed Polo box domain
PolyA_pol PF01743 Domain 17 12895 125.8 32 26.55 Changed Poly A polymerase head domain
PolyA_pol_arg_C PF12626 Domain 119 1568 123.3 35 26.37 Changed Polymerase A arginine-rich C-terminus
PolyA_pol_RNAbd PF12627 Domain 183 11520 62.8 25 13.32 Changed Probable RNA and SrmB- binding site of polymerase A
Polycystin_dom PF20519 Domain 11 3305 178.5 28 11.59 New Polycystin domain
PolyG_pol PF01518 Family 4 16 328 22 95.52 Changed Sigma NS protein
Polyhedrin PF00738 Family 3 21 232 66 94.11 Changed Polyhedrin
Polyketide_cyc PF03364 Family 95 10174 129 17 60.52 Changed Polyketide cyclase / dehydrase and lipid transport
Polyketide_cyc2 PF10604 Family 103 18864 143.2 14 81.53 Changed Polyketide cyclase / dehydrase and lipid transport
Polyoma_agno PF01736 Family 1 4 62.2 65 95.04 Changed Polyomavirus agnoprotein
Polyoma_coat PF00718 Domain 1 95 290.5 49 76.69 Changed Polyomavirus coat protein
Polyoma_coat2 PF00761 Family 8 155 217.8 32 90.19 Changed Polyomavirus coat protein
Polyoma_lg_T_C PF06431 Family 3 105 369.6 43 54.65 Changed Polyomavirus large T antigen C-terminus
polyprenyl_synt PF00348 Domain 415 28182 243.7 26 70.32 Changed Polyprenyl synthetase
Polysacc_deac_1 PF01522 Family 72 35250 131.1 20 36.93 Changed Polysaccharide deacetylase
Polysacc_deac_2 PF04748 Family 202 1935 207.5 27 56.89 Changed Divergent polysaccharide deacetylase
Polysacc_deac_3 PF15421 Family 3 18 374.4 44 89.48 Changed Putative polysaccharide deacetylase
Polysacc_lyase PF14099 Family 41 949 219.7 17 63.67 Changed Polysaccharide lyase
Polysacc_synt PF01943 Family 17 11856 282.1 14 58.14 Changed Polysaccharide biosynthesis protein
Polysacc_synt_2 PF02719 Family 62 7248 280.1 41 54.81 Changed Polysaccharide biosynthesis protein
Polysacc_synt_3 PF13440 Family 23 7155 286.6 17 60.51 Changed Polysaccharide biosynthesis protein
Polysacc_synt_4 PF04669 Family 27 2830 148.8 29 60.61 Changed Polysaccharide biosynthesis
Polysacc_synt_C PF14667 Family 317 12144 130.5 16 26.55 Changed Polysaccharide biosynthesis C-terminal domain
Polysacc_syn_2C PF08485 Family 74 844 47.9 47 14.08 Changed Polysaccharide biosynthesis protein C-terminal
Poly_A_pol_cat PF19244 Family 9 23 129.8 36 26.54 Changed Poly(A) polymerase catalytic subunit
Poly_export PF02563 Family 541 9230 85.6 25 23.4 Changed Polysaccharide biosynthesis/export protein
Pol_alpha_B_N PF08418 Domain 77 1365 200.7 23 34.39 Changed DNA polymerase alpha subunit B N-terminal
Pom PF17251 Domain 6 91 261.6 23 83.84 Changed Protochlamydia outer membrane protein
POM121 PF15229 Family 25 682 184.9 36 25.04 Changed POM121 family
Pombe_5TM PF09437 Family 2 12 133.9 37 83.18 Changed Pombe specific 5TM protein
Ponericin PF07442 Family 3 0 0 0 0 Changed Ponericin
POP1 PF06978 Family 71 2482 112.8 25 19.51 Changed Ribonucleases P/MRP protein subunit POP1
Popeye PF04831 Family 29 1389 219.7 36 61.16 Changed Popeye protein conserved region
POPLD PF08170 Domain 137 1645 94.5 32 10.86 Changed POPLD (NUC188) domain
POR PF01558 Family 80 12330 178.2 20 25.58 Changed Pyruvate ferredoxin/flavodoxin oxidoreductase
PorA PF11271 Family 72 916 305 25 87.11 Changed Porin PorA
PorB PF11565 Family 3 29 104.5 27 73.62 Changed Alpha helical Porin B
Porin_1 PF00267 Domain 10 659 308.4 40 91.41 Changed Gram-negative porin
Porin_10 PF14121 Family 77 907 600 23 90.82 Changed Putative porin
Porin_2 PF02530 Family 16 982 345.6 26 90.34 Changed Porin subfamily
Porin_3 PF01459 Family 68 7584 244.5 24 84.6 Changed Eukaryotic porin
Porin_4 PF13609 Domain 103 7481 323.9 18 89.71 Changed Gram-negative porin
Porin_5 PF16930 Family 19 445 333.3 21 82.13 Changed Putative porin
Porin_6 PF16939 Family 3 9 265.6 48 78.85 Changed Putative porin
Porin_7 PF16956 Family 2 166 187.4 18 90.34 Changed Putative general bacterial porin
Porin_8 PF16966 Family 5 117 288.3 34 80.5 Changed Porin-like glycoporin RafY
Porin_OmpG PF09381 Domain 7 21 266.2 47 88.81 Changed Outer membrane protein G (OmpG)
Porin_OmpG_1_2 PF16946 Domain 5 19 250.9 24 80.59 Changed OMPG-porin 1 family
Porin_OmpL1 PF11389 Family 6 10 276.3 48 92.28 Changed Leptospira porin protein OmpL1
Porin_O_P PF07396 Family 19 2900 300.8 13 72.81 Changed Phosphate-selective porin O and P
Porphobil_deam PF01379 Domain 666 9712 204 42 62.02 Changed Porphobilinogen deaminase, dipyromethane cofactor binding domain
Porphobil_deamC PF03900 Domain 16 9014 74.8 31 22.42 Changed Porphobilinogen deaminase, C-terminal domain
Porphyrn_cat_1 PF18206 Domain 38 199 103.4 26 11.88 Changed Porphyranase catalytic subdomain 1
Porph_ging PF09697 Family 22 1809 49.8 43 18.78 Changed Protein of unknown function (Porph_ging)
PorP_SprF PF11751 Family 52 4683 280.5 24 82.47 Changed Type IX secretion system membrane protein PorP/SprF
PORR PF11955 Family 96 2939 289.8 29 72.49 Changed Plant organelle RNA recognition domain
Portal_Gp20 PF07230 Family 65 240 420.4 38 80.63 Changed Bacteriophage T4-like portal protein (Gp20)
PorV PF19572 Domain 4 1105 235.7 33 61.93 Changed Type IX secretion system protein PorV
POR_N PF01855 Family 31 10066 223.4 25 30.31 Changed Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
Por_Secre_tail PF18962 Domain 209 26784 72.8 22 9.31 Changed Secretion system C-terminal sorting domain
Post_transc_reg PF13797 Family 23 584 80.5 29 82.26 Changed Post-transcriptional regulator
POT1 PF02765 Domain 47 1738 132.2 21 17 Changed Telomeric single stranded DNA binding POT1/CDC13
POT1PC PF16686 Domain 88 1256 146 24 23.12 Changed ssDNA-binding domain of telomere protection protein
Potassium_chann PF11404 Family 8 697 28.1 72 4.44 Changed Potassium voltage-gated channel
Potass_KdpF PF09604 Family 78 1735 23.8 43 68.85 Changed F subunit of K+-transporting ATPase (Potass_KdpF)
potato_inhibit PF00280 Domain 123 1999 62.2 39 66.03 Changed Potato inhibitor I family
Potex_coat PF06184 Family 2 5 151 31 94.02 Changed Potexvirus coat protein
POTRA PF07244 Domain 233 21951 79.6 19 31.86 Changed Surface antigen variable number repeat
POTRA_1 PF08478 Domain 78 5923 69.2 22 24.53 Changed POTRA domain, FtsQ-type
POTRA_2 PF08479 Domain 48 2953 75.4 24 13.1 Changed POTRA domain, ShlB-type
POTRA_3 PF17287 Domain 45 822 55.8 35 10.1 Changed POTRA domain
POTRA_TamA_1 PF17243 Domain 156 994 76.3 23 12.97 Changed POTRA domain TamA domain 1
Potyvirid-P3 PF13608 Family 3 4 378 31 14.23 Changed Protein P3 of Potyviral polyprotein
Poty_coat PF00767 Family 4 8 232.4 24 7.65 Changed Potyvirus coat protein
Poty_PP PF08440 Family 5 8 263.5 19 8.67 Changed Potyviridae polyprotein
Pou PF00157 Domain 26 6491 68.9 60 15.42 Changed Pou domain - N-terminal to homeobox domain
POU2F1_C PF19536 Domain 12 935 248.2 56 37.45 Changed POU domain, class 2, transcription factor 1 C-terminal
POX PF07526 Domain 105 2839 128.2 37 22.44 Changed Associated with HOX
Poxvirus_B22R PF04395 Family 12 52 199.1 29 11.25 Changed Poxvirus B22R protein
Poxvirus_B22R_C PF13168 Family 14 58 195.2 43 10.51 Changed Poxvirus B22R protein C-terminal
Poxvirus_B22R_N PF13169 Family 12 50 90.1 32 4.9 Changed Poxvirus B22R protein N-terminal
Poxv_Bcl-2-like PF06227 Family 37 136 156.2 17 92.15 Changed Poxvirus Bcl-2-like proteins
Pox_A11 PF05061 Family 7 53 250.4 40 98.74 Changed Poxvirus A11 Protein
Pox_A12 PF04651 Family 3 45 147.6 41 94.47 Changed Poxvirus A12 protein
Pox_A14 PF05767 Family 7 37 90.6 47 98.59 Changed Poxvirus virion envelope protein A14
Pox_A21 PF05323 Family 10 44 110.5 41 97.28 Changed Poxvirus A21 Protein
Pox_A22 PF04848 Family 9 93 152.5 30 77.2 Changed Poxvirus A22 protein
Pox_A28 PF04584 Family 10 42 141 47 99.25 Changed Poxvirus A28 family
Pox_A30L_A26L PF06086 Family 2 39 195.3 26 38.72 Changed Orthopoxvirus A26L/A30L protein
Pox_A31 PF05771 Family 4 25 112 44 81 Changed Poxvirus A31 protein
Pox_A32 PF04665 Domain 8 1246 187.3 28 69.87 Changed Poxvirus A32 protein
Pox_A3L PF05288 Family 9 35 70.2 52 92.75 Changed Poxvirus A3L Protein
Pox_A51 PF04948 Family 4 25 310.8 32 95.03 Changed Poxvirus A51 protein
Pox_A6 PF04924 Family 9 40 355.3 48 97.27 Changed Poxvirus A6 protein
Pox_A8 PF04745 Family 8 40 281.4 50 93.32 Changed VITF-3 subunit protein
Pox_A9 PF04835 Family 8 38 52.8 50 57.86 Changed A9 protein conserved region
Pox_Ag35 PF03286 Family 8 34 193.5 34 99.8 Changed Pox virus Ag35 surface protein
Pox_ATPase-GT PF10640 Domain 10 45 316.5 43 37.19 Changed mRNA capping enzyme N-terminal, ATPase and guanylyltransferase
Pox_A_type_inc PF04508 Coiled-coil 11 101 22.3 41 8.2 Changed Viral A-type inclusion protein repeat
Pox_B6 PF07389 Family 3 10 151.6 65 98.12 Changed Vaccinia B6 protein
Pox_C4_C10 PF03336 Family 5 45 290.4 30 90.76 Changed Poxvirus C4/C10 protein
Pox_C7_F8A PF03287 Family 10 35 146.7 34 88.58 Changed Poxvirus C7/F8A protein
Pox_D2 PF04701 Family 8 37 134.7 36 90.52 Changed Pox virus D2 protein
Pox_D3 PF04580 Family 7 36 231.3 33 95.04 Changed Chordopoxvirinae D3 protein
Pox_D5 PF03288 Domain 36 1122 84.3 17 15.92 Changed Poxvirus D5 protein-like
Pox_E10 PF04805 Family 9 45 69.2 58 70.49 Changed E10-like protein conserved region
Pox_E2-like PF04497 Family 14 104 504.9 18 92.91 Changed Poxviridae protein
Pox_E6 PF04656 Family 9 38 567.2 57 99.98 Changed Pox virus E6 protein
Pox_E8 PF03394 Family 8 38 239.7 62 84.05 Changed Poxvirus E8 protein
Pox_EPC_I2-L1 PF12575 Family 7 37 69.6 43 97.21 Changed Poxvirus entry protein complex L1 and I2
Pox_F11 PF04943 Family 3 31 331.1 26 78.72 Changed Poxvirus F11 protein
Pox_F12L PF03337 Family 8 37 630.2 32 98.14 Changed Poxvirus F12L protein
Pox_F15 PF04596 Family 8 33 136.3 52 89.73 Changed Poxvirus protein F15
Pox_F16 PF04708 Family 6 31 199 33 92.12 Changed Poxvirus F16 protein
Pox_F17 PF04767 Family 9 37 94.6 50 92.2 Changed DNA-binding 11 kDa phosphoprotein
Pox_G5 PF04599 Family 8 53 360 30 94.63 Changed Poxvirus G5 protein
Pox_G7 PF05503 Family 8 40 344 45 97.31 Changed Poxvirus G7-like
Pox_G9-A16 PF03003 Family 30 151 125.9 24 43.72 Changed Pox virus entry-fusion-complex G9/A16
Pox_H7 PF04787 Family 9 38 143.1 38 97.77 Changed Late protein H7
Pox_I1 PF03289 Family 9 39 305.9 58 97.57 Changed Poxvirus protein I1
Pox_I3 PF04661 Family 8 39 257.5 43 93.68 Changed Poxvirus I3 ssDNA-binding protein
Pox_I5 PF04713 Family 8 38 73.7 39 91.33 Changed Poxvirus protein I5
Pox_I6 PF04595 Family 13 46 315.9 35 84.57 Changed Poxvirus I6-like family
Pox_int_trans PF05718 Family 9 43 367.6 48 97.58 Changed Poxvirus intermediate transcription factor
Pox_J1 PF03338 Family 9 38 144.6 45 95.83 Changed Poxvirus J1 protein
Pox_L3_FP4 PF03339 Family 6 45 302.8 39 89.41 Changed Poxvirus L3/FP4 protein
Pox_L5 PF04872 Family 8 37 77.5 38 60.16 Changed Poxvirus L5 protein family
Pox_LP_H2 PF03356 Family 10 45 187.4 51 94.49 Changed Viral late protein H2
Pox_M2 PF04887 Family 3 19 194.4 48 88.31 Changed Poxvirus M2 protein
Pox_MCEL PF03291 Family 10 2736 258.2 28 65.31 Changed mRNA capping enzyme
Pox_mRNA-cap PF03341 Family 7 40 283.4 60 98.18 Changed Poxvirus mRNA capping enzyme, small subunit
Pox_P21 PF05313 Family 8 38 186.8 42 95.01 Changed Poxvirus P21 membrane protein
Pox_P35 PF03213 Family 7 38 326.1 35 98.59 Changed Poxvirus P35 protein
Pox_P4A PF03395 Family 3 42 853.4 44 95.01 Changed Poxvirus P4A protein
Pox_P4B PF03292 Family 7 54 598.7 38 92.89 Changed Poxvirus P4B major core protein
Pox_polyA_pol PF03296 Domain 7 45 149.8 57 30.7 Changed Poxvirus poly(A) polymerase nucleotidyltransferase domain
Pox_polyA_pol_C PF12629 Domain 10 44 207.3 45 42.66 Changed Poxvirus poly(A) polymerase C-terminal domain
Pox_polyA_pol_N PF12630 Domain 9 40 107 49 22.41 Changed Poxvirus poly(A) polymerase N-terminal domain
Pox_Rap94 PF03294 Family 9 52 698.8 47 99.99 Changed RNA polymerase-associated transcription specificity factor, Rap94
Pox_Rif PF03340 Family 8 45 546.9 54 98.76 Changed Poxvirus rifampicin resistance protein
Pox_RNA_pol PF03293 Family 9 38 159.9 61 95.37 Changed Poxvirus DNA-directed RNA polymerase, 18 kD subunit
Pox_RNA_Pol_19 PF05320 Family 9 39 166 51 93.96 Changed Poxvirus DNA-directed RNA polymerase 19 kDa subunit
Pox_RNA_Pol_22 PF05273 Family 8 38 179.7 60 98.9 Changed Poxvirus RNA polymerase 22 kDa subunit
Pox_RNA_pol_35 PF03396 Family 9 39 289.6 49 94.43 Changed Poxvirus DNA-directed RNA polymerase, 35 kD subunit
Pox_ser-thr_kin PF05445 Family 8 48 416.5 46 96.12 Changed Poxvirus serine/threonine protein kinase
Pox_T4_C PF04490 Family 3 11 147.5 35 62.55 Changed Poxvirus T4 protein, C terminus
Pox_T4_N PF04491 Family 3 13 47.3 51 22.39 Changed Poxvirus T4 protein, N terminus
Pox_TAA1 PF03295 Family 8 38 62.8 58 41.59 Changed Poxvirus trans-activator protein A1 C-terminal
Pox_TAP PF03355 Family 5 38 260.3 71 99.6 Changed Viral Trans-Activator Protein
Pox_VERT_large PF04441 Family 9 45 708.5 55 97.78 Changed Poxvirus early transcription factor (VETF), large subunit
Pox_vIL-18BP PF05566 Family 2 13 115.2 47 88.01 Changed Orthopoxvirus interleukin 18 binding protein
Pox_VLTF3 PF04947 Family 14 176 164.1 26 50.52 Changed Poxvirus Late Transcription Factor VLTF3 like
Pox_VP8_L4R PF04498 Family 7 39 217.1 52 85.93 Changed Poxvirus nucleic acid binding protein VP8/L4R
PP-binding PF00550 Domain 152 108801 66.4 22 6.73 Changed Phosphopantetheine attachment site
PP-binding_2 PF14573 Domain 2 36 87.6 45 29.14 Changed Acyl-carrier
PP1 PF07430 Domain 6 42 76.2 39 70.38 Changed Phloem filament protein PP1 cystatin-like domain
PP1c_bdg PF10488 Domain 6 711 192.7 29 39.23 Changed Phosphatase-1 catalytic subunit binding region
PP1_bind PF15276 Family 8 743 58.4 48 4.11 Changed Protein phosphatase 1 binding
PP1_inhibitor PF05361 Family 5 1408 106.8 37 74.35 Changed PKC-activated protein phosphatase-1 inhibitor
PP2 PF14299 Family 192 4735 155 26 51.89 Changed Phloem protein 2
PP28 PF10252 Domain 87 1551 83.5 52 38.37 Changed Casein kinase substrate phosphoprotein PP28
PP2C PF00481 Family 28 41309 220.1 21 48.07 Changed Protein phosphatase 2C
PP2C_2 PF13672 Family 38 12459 220 19 61.5 Changed Protein phosphatase 2C
PP2C_C PF07830 Domain 39 1758 75 53 19.18 Changed Protein serine/threonine phosphatase 2C, C-terminal domain
PP4R3 PF04802 Family 110 3058 183.8 47 22.76 Changed Phosphatase 4 regulatory subunit 3
PPAK PF02818 Motif 19 1223 26.6 66 0.42 Changed PPAK motif
PPARgamma_N PF12577 Family 8 506 83.7 59 17.81 Changed PPAR gamma N-terminal region
PPC PF04151 Domain 86 3466 71.8 23 9.41 Changed Bacterial pre-peptidase C-terminal domain
PPDFL PF15060 Family 17 569 96.7 47 85.22 Changed Differentiation and proliferation regulator
PPDK_N PF01326 Family 103 17188 221.2 23 37.19 Changed Pyruvate phosphate dikinase, AMP/ATP-binding domain
PPE PF00823 Family 115 1909 147.8 36 33.24 Changed PPE family
PPE-PPW PF18878 Family 26 277 47.2 47 10.63 Changed PPE-PPW subfamily C-terminal region
PPE-SVP PF12484 Family 89 720 83.8 28 21.91 Changed PPE-SVP subfamily C-terminal region
PPIP5K2_N PF18086 Domain 46 4207 88.7 62 7.18 Changed Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain
pPIWI_RE_REase PF18154 Domain 34 229 115.5 26 30.15 Changed REase associating with pPIWI_RE
pPIWI_RE_X PF13111 Domain 37 226 390.7 17 41.04 Changed pPIWI_RE module N-terminal domain
pPIWI_RE_Y PF18156 Domain 22 160 142.7 25 37.38 Changed pPIWI_RE three-gene island domain Y
pPIWI_RE_Z PF18155 Domain 26 187 154.7 23 16.1 Changed pPIWI RE three-gene island domain Z
PPI_Ypi1 PF07491 Family 92 1603 61.5 43 35.27 Changed Protein phosphatase inhibitor
PPK2 PF03976 Domain 8 8520 227.4 38 80.5 Changed Polyphosphate kinase 2 (PPK2)
PPL4 PF18188 Family 6 30 149.4 20 15.71 Changed Prim-pol 4
PPL5 PF18168 Family 2 34 186.3 29 41.48 Changed Prim-pol family 5
Ppnp PF06865 Domain 130 1346 91.6 44 90.35 Changed Pyrimidine/purine nucleoside phosphorylase
PPO1_DWL PF12142 Domain 29 1114 51.2 47 9.5 Changed Polyphenol oxidase middle domain
PPO1_KFDV PF12143 Domain 32 1113 124.1 37 24.22 Changed Protein of unknown function (DUF_B2219)
PPP1R26_N PF15740 Family 12 485 387.7 22 70.26 Changed Protein phosphatase 1 regulatory subunit 26 N-terminus
PPP1R32 PF15691 Family 14 399 255.2 35 89.93 Changed Protein phosphatase 1 regulatory subunit 32
PPP1R35_C PF15503 Family 12 314 132.9 29 48.78 Changed Protein phosphatase 1 regulatory subunit 35 C-terminus
PPP4R2 PF09184 Family 24 1674 260 20 65.52 Changed PPP4R2
PPP5 PF08321 Repeat 117 2621 87 31 15.73 Changed PPP5 TPR repeat region
PPPI_inhib PF14895 Family 20 469 279.2 28 74.01 Changed Protein phosphatase 1 inhibitor
PPR PF01535 Repeat 458 253857 29.3 22 14.23 Changed PPR repeat
PPR_1 PF12854 Repeat 161 20057 33 30 6.41 Changed PPR repeat
PPR_2 PF13041 Repeat 182 307114 48.8 26 27.96 Changed PPR repeat family
PPR_3 PF13812 Repeat 7 30938 58.2 19 12.16 Changed Pentatricopeptide repeat domain
PPR_long PF17177 Repeat 9 8664 156.2 17 24.34 Changed Pentacotripeptide-repeat region of PRORP
PPS_PS PF02006 Family 76 260 173.6 51 69.44 Changed Phosphopantothenate/pantothenate synthetase
PPTA PF01239 Repeat 612 18228 31.7 24 28.02 Changed Protein prenyltransferase alpha subunit repeat
Pput2613-deam PF14427 Family 4 14 119.3 30 6.22 Changed Pput_2613-like deaminase
PPV_E1_C PF00519 Domain 11 301 277 44 46.34 Changed Papillomavirus helicase
PPV_E1_DBD PF20450 Domain 11 268 138.3 40 22.4 New Papillomavirus E1, DNA-binding domain
PPV_E1_N PF00524 Family 7 262 125.6 33 20.59 Changed E1 Protein, N terminal domain
PPV_E2_C PF00511 Domain 15 287 78.6 35 19.64 Changed E2 (early) protein, C terminal
PPV_E2_N PF00508 Family 13 272 197.8 40 48.2 Changed E2 (early) protein, N terminal
Ppx-GppA PF02541 Family 10 11067 285 23 68.73 Changed Ppx/GppA phosphatase family
PP_kinase PF02503 Domain 564 6639 201.1 31 28.17 Changed Polyphosphate kinase middle domain
PP_kinase_C PF13090 Domain 22 6655 171.8 43 24.15 Changed Polyphosphate kinase C-terminal domain 2
PP_kinase_C_1 PF17941 Domain 317 6629 166.7 52 23.31 Changed Polyphosphate kinase C-terminal domain 1
PP_kinase_N PF13089 Domain 539 6599 106.1 42 14.86 Changed Polyphosphate kinase N-terminal domain
PP_M1 PF03012 Family 5 12 281.9 49 97.94 Changed Phosphoprotein
pP_pnuc_1 PF18165 Domain 25 96 135.4 24 45.68 Changed Predicted pPIWI-associating nuclease
pP_pnuc_2 PF18166 Domain 15 64 115.8 25 49.09 Changed Predicted pPIWI-associating nuclease
PQ-loop PF04193 Repeat 207 19481 59.5 22 33.71 Changed PQ loop repeat
PqiA PF04403 Family 232 3728 150.7 25 63.45 Changed Paraquat-inducible protein A
PQQ PF01011 Repeat 65 5079 35.7 28 7.57 Changed PQQ enzyme repeat
PqqA PF08042 Family 32 632 18.9 45 58.57 Changed PqqA family
PqqD PF05402 Family 386 3673 68.8 20 53.53 Changed Coenzyme PQQ synthesis protein D (PqqD)
PQQ_2 PF13360 Repeat 45 35766 168.5 14 46.88 Changed PQQ-like domain
PQQ_3 PF13570 Repeat 622 2387 40.3 24 8.61 Changed PQQ-like domain
PRA-CH PF01502 Family 562 8462 74.2 49 31.54 Changed Phosphoribosyl-AMP cyclohydrolase
PRA-PH PF01503 Family 37 9460 87.7 30 39.91 Changed Phosphoribosyl-ATP pyrophosphohydrolase
PRA1 PF03208 Family 166 4664 138.6 24 64.21 Changed PRA1 family protein
PRAI PF00697 Domain 17 7543 194 30 67.48 Changed N-(5'phosphoribosyl)anthranilate (PRA) isomerase
PRANC PF09372 Domain 34 282 95.7 21 18.86 Changed PRANC domain
PRAP PF15314 Family 13 119 44.9 54 32.81 Changed Proline-rich acidic protein 1, pregnancy-specific uterine
PRAS PF15798 Family 8 374 119.6 44 36.4 Changed Proline-rich AKT1 substrate 1
PRC PF05239 Domain 114 16748 76.2 18 42.21 Changed PRC-barrel domain
PRC2_HTH_1 PF18118 Domain 13 1545 93.9 51 13.69 Changed Polycomb repressive complex 2 tri-helical domain
PrcB_C PF14343 Family 147 769 57.9 27 28.92 Changed PrcB C-terminal
PRCC PF10253 Family 64 1424 243.2 19 59.86 Changed Mitotic checkpoint regulator, MAD2B-interacting
PRCH PF03967 Family 25 332 133.3 44 51.85 Changed Photosynthetic reaction centre, H-chain N-terminal region
PRD PF00874 Domain 164 10576 90.5 20 28.04 Changed PRD domain
Prd1-P2 PF09214 Family 1 1 555 100 93.91 Changed Bacteriophage Prd1, adsorption protein P2
PRD1_DD PF11087 Family 2 6 51.7 46 89.6 Changed PRD1 phage membrane DNA delivery
PRD1_P5_C PF08949 Domain 1 1 219 100 64.41 Changed Bacteriophage PRD1, spike protein P5, C-terminal
PRD1_P5_spike_N PF08948 Domain 2 2 123.5 39 53 Changed Bacteriophage PRD1, P5, spike N-terminal
PRD_Mga PF08270 Family 3 52 211.8 18 44.19 Changed M protein trans-acting positive regulator (MGA) PRD domain
Pre-PUA PF17832 Domain 57 3104 86.9 32 23.2 Changed Pre-PUA-like domain
Pre-SET PF05033 Family 298 7727 110.9 30 13.71 Changed Pre-SET motif
PreAtp-grasp PF18604 Domain 83 231 94.7 25 20.98 Changed Pre ATP-grasp domain
preATP-grasp_3 PF18301 Domain 32 223 74.7 24 22.09 Changed pre ATP-grasp 3 domain
Prefoldin PF02996 Coiled-coil 35 5652 117.2 21 48.46 Changed Prefoldin subunit
Prefoldin_2 PF01920 Coiled-coil 53 7002 103 20 71.8 Changed Prefoldin subunit
Prefoldin_3 PF13758 Coiled-coil 21 422 96 41 15.78 Changed Prefoldin subunit
PRELI PF04707 Family 15 5142 144.1 29 46.8 Changed PRELI-like family
Prenylcys_lyase PF07156 Family 25 1880 329.6 28 66.18 Changed Prenylcysteine lyase
Prenyltrans PF00432 Repeat 63 28018 42.1 23 37.94 Changed Prenyltransferase and squalene oxidase repeat
Prenyltransf PF01255 Family 1161 13804 214.4 37 82.07 Changed Putative undecaprenyl diphosphate synthase
PRESAN PF09687 Domain 140 1200 121 18 31.61 Changed Plasmodium RESA N-terminal
Presenilin PF01080 Family 53 2746 255.3 33 82.71 Changed Presenilin
Preseq_ALAS PF09029 Domain 12 797 101.6 32 16.96 Changed 5-aminolevulinate synthase presequence
preSET_CXC PF18264 Domain 5 2584 32.8 71 4.22 Changed CXC domain
PRE_C2HC PF07530 Domain 10 694 66.1 29 13.64 Changed Associated with zinc fingers
PRF PF06875 Domain 2 330 177.2 46 78.02 Changed Plethodontid receptivity factor PRF
PrgH PF09480 Family 7 64 321.3 24 93.61 Changed Type III secretion system protein PrgH-EprH (PrgH)
PrgI PF12666 Family 80 1105 90.7 28 48.39 Changed PrgI family protein
PrgU PF09627 Domain 1 2 106 100 90.21 Changed PrgU-like protein
PRiA4_ORF3 PF07929 Family 94 2790 159.4 21 59.29 Changed Plasmid pRiA4b ORF-3-like protein
PriA_3primeBD PF17764 Domain 329 7566 98.3 28 13.38 Changed 3'DNA-binding domain (3'BD)
PriA_C PF18074 Domain 321 6137 95.5 23 12.79 Changed Primosomal protein N C-terminal domain
PriA_CRR PF18319 Domain 113 5835 26.6 45 3.54 Changed PriA DNA helicase Cys-rich region (CRR) domain
Pribosyltran PF00156 Domain 26 55659 142.1 16 56.34 Changed Phosphoribosyl transferase domain
Pribosyltran_N PF13793 Domain 303 16729 115.7 42 33.78 Changed N-terminal domain of ribose phosphate pyrophosphokinase
Pribosyl_synth PF14572 Domain 6 14886 128.9 37 38.13 Changed Phosphoribosyl synthetase-associated domain
PriC PF07445 Family 30 367 161 25 88.4 Changed Primosomal replication protein priC
PriCT_1 PF08708 Domain 17 817 66.3 24 16.08 Changed Primase C terminal 1 (PriCT-1)
PriCT_2 PF08707 Domain 53 944 75.4 23 10.48 Changed Primase C terminal 2 (PriCT-2)
Prim-Pol PF09250 Domain 99 4396 171.7 20 44.35 Changed Bifunctional DNA primase/polymerase, N-terminal
PRIMA1 PF16101 Family 6 367 103.7 51 50.07 Changed Proline-rich membrane anchor 1
Prim_Zn_Ribbon PF08273 Domain 12 554 38.7 45 8.46 Changed Zinc-binding domain of primase-helicase
Prion PF00377 Domain 12 281 115.3 41 49.27 Changed Prion/Doppel alpha-helical domain
Prion_bPrPp PF11587 Family 6 150 29.2 63 11.49 Changed Major prion protein bPrPp - N terminal
Prion_octapep PF03991 Repeat 5 13 7.4 84 6.69 Changed Copper binding octapeptide repeat
Prismane PF03063 Family 155 3230 463.2 32 93.06 Changed Prismane/CO dehydrogenase family
PriX PF18689 Domain 10 34 95.8 36 38.77 Changed Primase X
PRK PF00485 Domain 9 16692 177.1 25 50.94 Changed Phosphoribulokinase / Uridine kinase family
PrkA PF06798 Family 62 2257 252.5 39 39.4 Changed PrkA serine protein kinase C-terminal domain
PRKCSH PF07915 Family 100 3347 85.4 29 21.07 Changed Glucosidase II beta subunit-like protein
PRKCSH-like PF12999 Family 5 2656 148.3 34 33.85 Changed Glucosidase II beta subunit-like
PRKCSH_1 PF13015 Family 5 2323 149.6 29 28.81 Changed Glucosidase II beta subunit-like protein
PRKG1_interact PF15898 Coiled-coil 29 2417 94.8 55 12.15 Changed cGMP-dependent protein kinase interacting domain
PrlF_antitoxin PF15937 Family 7 645 79.4 33 83.05 Changed prlF antitoxin for toxin YhaV_toxin
PrmA PF06325 Family 27 14115 184.7 24 49.32 Changed Ribosomal protein L11 methyltransferase (PrmA)
PrmC_N PF17827 Domain 470 7898 69.5 25 23.6 Changed PrmC N-terminal domain
PRMT5 PF05185 Domain 30 2133 165.3 52 24.51 Changed PRMT5 arginine-N-methyltransferase
PRMT5_C PF17286 Domain 30 2008 190.7 40 28.54 Changed PRMT5 oligomerisation domain
PRMT5_TIM PF17285 Domain 29 2010 251.9 30 38.14 Changed PRMT5 TIM barrel domain
pRN1_helical PF13010 Domain 2 3 131.7 44 18.21 Changed Primase helical domain
PRNT PF15174 Family 2 5 47.2 63 56.59 Changed Prion-related protein testis-specific
Pro-kuma_activ PF09286 Domain 87 5578 137.6 25 21.88 Changed Pro-kumamolisin, activation domain
Pro-MCH PF05824 Family 4 318 69.9 51 46.65 Changed Pro-melanin-concentrating hormone (Pro-MCH)
Pro-NT_NN PF07421 Family 7 337 128.4 53 94.05 Changed Neurotensin/neuromedin N precursor
Pro-rich PF15240 Disordered 13 237 117.1 35 76.36 Changed Proline-rich protein
Pro-rich_19 PF15455 Family 10 154 294.1 47 68.57 Changed Proline-rich 19
PRO8NT PF08082 Domain 39 1897 145.2 74 6.7 Changed PRO8NT (NUC069), PrP8 N-terminal domain
PROCN PF08083 Domain 15 2053 361 77 17.47 Changed PROCN (NUC071) domain
PROCT PF08084 Domain 79 1803 119.3 53 5.37 Changed PROCT (NUC072) domain
PRODH PF18327 Domain 146 1527 47.3 35 4.03 Changed Proline utilization A proline dehydrogenase N-terminal domain
Profilin PF00235 Domain 233 3901 125.5 29 87.18 Changed Profilin
Prog_receptor PF02161 Family 9 246 374.6 53 59.09 Changed Progesterone receptor
Proho_convert PF12177 Domain 8 372 39 70 5.39 Changed Prohormone convertase enzyme
Prok-E2_A PF14457 Family 6 151 140.9 21 19.72 Changed Prokaryotic E2 family A
Prok-E2_B PF14461 Family 5 142 119.6 20 21.52 Changed Prokaryotic E2 family B
Prok-E2_C PF14459 Family 1 17 128.1 46 25.01 Changed Prokaryotic E2 family C
Prok-E2_D PF14460 Family 16 346 169.4 23 69.37 Changed Prokaryotic E2 family D
Prok-E2_E PF14462 Family 10 156 119.5 30 56.77 Changed Prokaryotic E2 family E
Prok-JAB PF14464 Family 59 3561 118.4 21 56.92 Changed Prokaryotic homologs of the JAB domain
Prok-RING_1 PF14446 Family 22 123 52.1 37 15.77 Changed Prokaryotic RING finger family 1
Prok-RING_2 PF14445 Family 3 13 43.7 30 13.92 Changed Prokaryotic RING finger family 2
Prok-RING_4 PF14447 Family 10 1938 51.9 63 7.19 Changed Prokaryotic RING finger family 4
Prok-TraM PF09228 Domain 14 71 97.5 28 43.12 Changed Prokaryotic Transcriptional repressor TraM
Prokineticin PF06607 Family 7 774 94.2 42 63.83 Changed Prokineticin
prok_STING PF20300 Family 38 58 141.7 19 43.61 New Prokaryotic STING domain
Prok_Ub PF14454 Family 24 241 65.7 37 86.11 Changed Prokaryotic Ubiquitin
PROL5-SMR PF15621 Family 9 88 96.1 52 45.5 Changed Proline-rich submaxillary gland androgen-regulated family
Prolactin_RP PF15172 Family 6 269 43.8 51 38.15 Changed Prolactin-releasing peptide
Prolamin_like PF05617 Domain 81 2457 67.5 24 50.11 Changed Prolamin-like
Promethin PF16015 Family 68 990 104.4 24 50.9 Changed Promethin
Prominin PF05478 Family 27 2570 575.2 27 87.85 Changed Prominin
PRONE PF03759 Family 53 2804 298.7 51 65.85 Changed PRONE (Plant-specific Rop nucleotide exchanger)
Propeptide_C1 PF08127 Motif 72 1146 40.8 41 11.69 Changed Peptidase family C1 propeptide
Propeptide_C25 PF08126 Family 4 158 182.3 17 15.81 Changed Propeptide_C25
Propep_M14 PF02244 Domain 324 3953 72.4 24 16.65 Changed Carboxypeptidase activation peptide
Prophage_tail PF06605 Family 22 1132 271.4 16 34.55 Changed Prophage endopeptidase tail
Prophage_tailD1 PF18994 Domain 53 363 83.7 20 11.68 Changed Prophage endopeptidase tail N-terminal domain
ProQ PF04352 Domain 51 1057 107.6 32 51.18 Changed ProQ/FINO family
ProQ_C PF17516 Domain 51 345 50.9 44 23.33 Changed ProQ C-terminal domain
PRORP PF16953 Domain 16 1431 203.5 31 37.29 Changed Protein-only RNase P
ProRS-C_1 PF09180 Domain 370 4954 75.3 34 11.08 Changed Prolyl-tRNA synthetase, C-terminal
ProRS-C_2 PF09181 Domain 4 5 64 55 13.85 Changed Prolyl-tRNA synthetase, C-terminal
ProSAAS PF07259 Family 11 145 225.8 45 79.49 Changed ProSAAS precursor
Prosystemin PF07376 Family 2 8 142.5 73 101.97 Changed Prosystemin
Protamine_3 PF08188 Family 2 0 0 0 0 Changed Spermatozal protamine family
Protamine_like PF06382 Family 2 148 107.8 22 70.27 Changed Protamine and protamine like
Protamine_P1 PF00260 Family 6 42 47.2 74 95.02 Changed Protamine P1
Protamine_P2 PF00841 Family 4 65 90.3 59 73.56 Changed Sperm histone P2
Proteasome PF00227 Domain 153 39483 170.9 21 71.53 Changed Proteasome subunit
Proteasome_A_N PF10584 Family 99 12632 22.9 63 8.62 Changed Proteasome subunit A N-terminal signature
Proteasom_PSMB PF10508 Repeat 6 1150 380.3 26 89.1 Changed Proteasome non-ATPase 26S subunit
Proteasom_Rpn13 PF04683 Domain 128 1983 84 44 23.1 Changed Proteasome complex subunit Rpn13 ubiquitin receptor
Protein_K PF12283 Family 1 11 55.5 81 86.04 Changed Bacteriophage protein K
protein_MS5 PF04776 Family 51 537 105.7 32 36.68 Changed Protein MS5
Prothymosin PF03247 Family 13 749 96.7 56 69.45 Changed Prothymosin/parathymosin family
Protocadherin PF08374 Family 16 2218 216.6 48 19.49 Changed Protocadherin
Protoglobin PF11563 Domain 72 2853 161.3 18 39.4 Changed Protoglobin
Proton_antipo_C PF01010 Family 77 698 150.5 23 25.12 Changed NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus
Proton_antipo_M PF00361 Family 14 36719 280.3 26 51.06 Changed Proton-conducting membrane transporter
Proton_antipo_N PF00662 Family 411 11473 51 31 7.32 Changed NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
Prot_ATP_ID_OB PF16450 Domain 88 11130 60 32 13.55 Changed Proteasomal ATPase OB C-terminal domain
Prot_ATP_OB_N PF17758 Domain 66 1304 62.4 51 10.85 Changed Proteasomal ATPase OB N-terminal domain
Prot_inhib_II PF02428 Domain 23 374 49.9 45 58.16 Changed Potato type II proteinase inhibitor family
Pro_3_hydrox_C PF05373 Domain 3 31 97.4 24 34.71 Changed L-proline 3-hydroxylase, C-terminal
Pro_Al_protease PF02983 Domain 85 2123 57.8 30 15.04 Changed Alpha-lytic protease prodomain
Pro_CA PF00484 Domain 252 14510 147.8 27 59.28 Changed Carbonic anhydrase
Pro_CA_2 PF20393 Domain 38 154 128.3 25 83.61 New Putative carbonic anhydrase
Pro_dh PF01619 Family 197 9366 301.7 26 45.01 Changed Proline dehydrogenase
Pro_dh-DNA_bdg PF14850 Domain 86 2386 112.3 52 9.95 Changed DNA-binding domain of Proline dehydrogenase
Pro_isomerase PF00160 Domain 62 46044 154.7 34 47.12 Changed Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Pro_racemase PF05544 Family 14 3969 311.9 35 94.36 Changed Proline racemase
Pro_sub2 PF18513 Domain 2 23 88 71 6.71 Changed Prodomain subtilisin 2
Prp18 PF02840 Family 83 1862 137.1 49 38.08 Changed Prp18 domain
Prp19 PF08606 Domain 76 1890 66.5 62 13.17 Changed Prp19/Pso4-like
PRP1_N PF06424 Domain 105 1905 140.1 49 16.5 Changed PRP1 splicing factor, N-terminal
PRP21_like_P PF12230 Family 13 1889 219.5 30 34.61 Changed Pre-mRNA splicing factor PRP21 like protein
PRP3 PF08572 Domain 115 2024 209 42 34.95 Changed pre-mRNA processing factor 3 (PRP3)
Prp31_C PF09785 Family 85 1803 127 46 24.71 Changed Prp31 C terminal domain
PRP38 PF03371 Family 132 2955 159.1 36 47.13 Changed PRP38 family
PRP38_assoc PF12871 Domain 30 629 92.9 37 26.61 Changed Pre-mRNA-splicing factor 38-associated hydrophilic C-term
PRP4 PF08799 Domain 150 3296 28.8 54 6.46 Changed pre-mRNA processing factor 4 (PRP4) like
PRP8_domainIV PF12134 Domain 16 1931 216.3 81 10.09 Changed PRP8 domain IV core
PRP9_N PF16958 Domain 15 73 135.5 26 27.83 Changed Pre-mRNA-splicing factor PRP9 N-terminus
PrpF PF04303 Family 5 3184 346.1 38 91.04 Changed PrpF protein
PrpR_N PF06506 Domain 80 1053 163.9 23 27.39 Changed Propionate catabolism activator
PRR18 PF15671 Family 3 280 125.6 26 72.57 Changed Proline-rich protein family 18
PRR20 PF15708 Family 3 83 180.6 44 85.84 Changed Proline-rich protein family 20
PRR22 PF15776 Family 8 146 285.4 47 80.41 Changed Proline-rich protein family 22
PRRSV_2b PF07069 Family 2 9 67.8 35 92.01 Changed Porcine reproductive and respiratory syndrome virus 2b
PRRSV_Env PF02340 Family 4 8 214.4 31 86.22 Changed PRRSV putative envelope protein
PrsW-protease PF13367 Family 64 3267 196.2 23 54.36 Changed PrsW family intramembrane metalloprotease
PRT6_C PF18995 Domain 149 3833 383.3 24 23.16 Changed Proteolysis_6 C-terminal
PRTase_1 PF11202 Family 55 769 248.3 55 43.25 Changed Phosphoribosyl transferase (PRTase)
PRTase_2 PF15609 Family 57 766 196.7 46 33.18 Changed Phosphoribosyl transferase
PRTase_3 PF15610 Family 11 130 252.5 32 87.46 Changed PRTase ComF-like
PRTP PF01366 Family 12 91 624.6 30 84.8 Changed Herpesvirus processing and transport protein
PRTRC_E PF19556 Family 27 177 162.4 30 83.03 Changed PRTRC system protein E
PRT_C PF08372 Family 22 3686 143.3 40 17.21 Changed Plant phosphoribosyltransferase C-terminal
PRY PF13765 Family 114 25210 48.6 39 8.81 Changed SPRY-associated domain
Pr_beta_C PF12465 Family 98 1560 35.6 40 12.87 Changed Proteasome beta subunits C terminal
PS-DH PF14765 Domain 75 18981 275.9 18 12.28 Changed Polyketide synthase dehydratase
PsaA_PsaB PF00223 Family 15 1940 331.4 37 90.05 Changed Photosystem I psaA/psaB protein
PsaD PF02531 Family 25 466 128.8 71 68.01 Changed PsaD
PsaF PF17550 Family 1 1 162 100 100 Changed Family of unknown function
PsaL PF02605 Family 50 483 147.7 54 66.91 Changed Photosystem I reaction centre subunit XI
PsaM PF07465 Family 19 135 28.8 62 85.04 Changed Photosystem I protein M (PsaM)
PsaN PF05479 Family 7 402 112.7 39 68.69 Changed Photosystem I reaction centre subunit N (PSAN or PSI-N)
PsaX PF08078 Family 10 60 35 60 76.04 Changed PsaX family
PSA_CBD PF18341 Domain 9 27 58.5 38 38.26 Changed PSA endolysin C-terminal cell wall binding domain
Psb28 PF03912 Family 66 474 105 54 65.27 Changed Psb28 protein
PsbH PF00737 Family 12 399 50.4 72 49.9 Changed Photosystem II 10 kDa phosphoprotein
PsbI PF02532 Family 18 247 35.8 72 80.46 Changed Photosystem II reaction centre I protein (PSII 4.8 kDa protein)
PsbJ PF01788 Family 17 254 38.1 61 76.71 Changed PsbJ
PsbK PF02533 Family 14 307 40.2 71 61.87 Changed Photosystem II 4 kDa reaction centre component
PsbL PF02419 Family 7 221 36.4 77 70.36 Changed PsbL protein
PsbM PF05151 Family 14 243 30.6 65 70.78 Changed Photosystem II reaction centre M protein (PsbM)
PsbN PF02468 Family 40 283 42.8 56 84.66 Changed Photosystem II reaction centre N protein (psbN)
PsbP PF01789 Domain 75 2981 154.3 22 58.03 Changed PsbP
PsbP_2 PF18933 Domain 6 198 168.3 14 52.19 Changed PsbP-like protein
PsbQ PF05757 Family 20 987 159.2 28 77.4 Changed Oxygen evolving enhancer protein 3 (PsbQ)
PsbR PF04725 Family 7 362 91.2 65 64.66 Changed Photosystem II 10 kDa polypeptide PsbR
PsbT PF01405 Family 14 225 28.8 63 78.53 Changed Photosystem II reaction centre T protein
PsbU PF06514 Family 10 193 91.5 49 58.89 Changed Photosystem II 12 kDa extrinsic protein (PsbU)
PsbW PF07123 Family 15 387 124.5 52 84.42 Changed Photosystem II reaction centre W protein (PsbW)
PsbX PF06596 Family 34 526 38.1 60 34.06 Changed Photosystem II reaction centre X protein (PsbX)
PsbY PF06298 Family 42 669 33.5 59 36.03 Changed Photosystem II protein Y (PsbY)
PSCyt1 PF07635 Family 62 4952 57.3 32 6.93 Changed Planctomycete cytochrome C
PSCyt2 PF07583 Family 220 4311 201.2 34 22.74 Changed Protein of unknown function (DUF1549)
PSCyt3 PF07627 Family 111 1590 98.6 39 12.19 Changed Protein of unknown function (DUF1588)
PSD1 PF07587 Family 191 4343 243 31 27.78 Changed Protein of unknown function (DUF1553)
PSD2 PF07624 Family 84 1431 73.5 25 9.2 Changed Protein of unknown function (DUF1585)
PSD3 PF07626 Family 75 1318 65 33 8.01 Changed Protein of unknown function (DUF1587)
PSD4 PF07631 Family 110 1580 127.6 32 15.81 Changed Protein of unknown function (DUF1592)
PSD5 PF07637 Family 94 1343 61.6 30 7.61 Changed Protein of unknown function (DUF1595)
PSDC PF12588 Family 85 933 132.3 35 30.09 Changed Phophatidylserine decarboxylase
PseudoU_synth_1 PF01416 Domain 262 20779 106.9 20 45.56 Changed tRNA pseudouridine synthase
PseudoU_synth_2 PF00849 Family 53 44650 149.9 24 46.79 Changed RNA pseudouridylate synthase
Psg1 PF14610 Family 93 491 180.6 24 49.68 Changed Ykl077w/Psg1 (Pma1 Stabilization in Golgi)
PSGP PF07276 Repeat 3 194 12 100 65.16 Changed Apopolysialoglycoprotein (PSGP)
PSI PF01437 Family 95 17234 54.7 25 5.65 Changed Plexin repeat
PsiA PF06952 Family 3 34 217.9 40 96.76 Changed PsiA protein
PsiB PF06290 Family 7 25 134.1 46 93.9 Changed Plasmid SOS inhibition protein (PsiB)
PsiE PF06146 Family 223 1888 118.9 21 75.1 Changed Phosphate-starvation-inducible E family
PsiF_repeat PF07769 Repeat 54 895 32.7 54 57.02 Changed psiF repeat
PSII PF00421 Family 16 1870 244.6 32 85.1 Changed Photosystem II protein
PSII_BNR PF14870 Repeat 15 2827 148.4 21 49.42 Changed Photosynthesis system II assembly factor YCF48
PSII_Pbs27 PF13326 Family 17 628 143.2 30 79.39 Changed Photosystem II Pbs27
PSII_Pbs31 PF18240 Domain 4 17 92.4 42 31.18 Changed Photosystem II Psb31 protein
PSII_Ycf12 PF05969 Family 11 147 33.1 55 81.87 Changed Photosystem II complex subunit Ycf12
PSI_8 PF00796 Family 25 220 24.8 56 40.11 Changed Photosystem I reaction centre subunit VIII
PSI_integrin PF17205 Domain 94 3661 49.7 40 5.72 Changed Integrin plexin domain
PSI_PsaE PF02427 Domain 25 508 60 68 45.07 Changed Photosystem I reaction centre subunit IV / PsaE
PSI_PsaF PF02507 Family 9 441 146.3 57 72.67 Changed Photosystem I reaction centre subunit III
PSI_PsaH PF03244 Family 8 296 130.3 70 89.79 Changed Photosystem I reaction centre subunit VI
PSI_PsaJ PF01701 Family 30 275 36.1 55 74.91 Changed Photosystem I reaction centre subunit IX / PsaJ
PSI_PSAK PF01241 Family 24 706 78.9 39 59.31 Changed Photosystem I psaG / psaK
PSK PF06404 Family 38 1023 73 33 81.14 Changed Phytosulfokine precursor protein (PSK)
PSK_trans_fac PF07704 Domain 52 795 80.7 26 95.63 Changed Rv0623-like transcription factor
PSMalpha PF17063 Family 5 5 20.8 44 98.11 Changed Phenol-soluble modulin alpha peptide family
PSMbeta PF05480 Family 18 34 42.9 39 57.85 Changed Phenol-soluble modulin beta protein
PSMdelta PF19693 Family 3 0 0 0 0 Changed Phenol-soluble modulin delta protein
PSP PF04046 Family 89 2856 47.9 52 7.71 Changed PSP
PSP1 PF04468 Family 401 4234 86.3 40 19.85 Changed PSP1 C-terminal conserved region
PSP94 PF05825 Domain 4 775 84.9 30 63.33 Changed Beta-microseminoprotein (PSP-94)
PspA_IM30 PF04012 Family 11 5538 220.3 23 89.76 Changed PspA/IM30 family
PspB PF06667 Family 36 687 71.6 36 86.32 Changed Phage shock protein B
PspC PF04024 Domain 612 7654 58.2 33 23.43 Changed PspC domain
PSRP-3_Ycf65 PF04839 Family 16 447 47.5 69 30.57 Changed Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65)
PSRT PF07636 Motif 4 16 26.2 43 26.34 Changed PSRT
PSS PF03034 Family 58 2340 241.9 46 59.43 Changed Phosphatidyl serine synthase
Psu PF07455 Family 1 33 146.8 42 94.31 Changed Phage polarity suppression protein (Psu)
PSY3 PF16836 Domain 12 52 191.1 22 78.52 Changed Shu complex component Psy3, DNA-binding description
PS_Dcarbxylase PF02666 Family 107 11096 205.7 26 54.51 Changed Phosphatidylserine decarboxylase
PS_pyruv_trans PF04230 Family 154 6254 264 13 65.27 Changed Polysaccharide pyruvyl transferase
PT PF04886 Repeat 14 747 37.6 42 8.12 Changed PT repeat
PT-HINT PF07591 Family 3 1665 126.4 32 8.76 Changed Pretoxin HINT domain
PT-TG PF14449 Family 31 281 74.2 23 12.37 Changed Pre-toxin TG
PT-VENN PF04829 Family 25 392 50 38 3.89 Changed Pre-toxin domain with VENN motif
PTAC PF06130 Domain 274 2588 74 33 62.26 Changed Phosphate propanoyltransferase
ptaRNA1_toxin PF12703 Family 2 24 69.8 61 82.03 Changed Toxin of toxin-antitoxin type 1 system
PTase_Orf2 PF11468 Family 5 154 273.6 28 92.14 Changed Aromatic prenyltransferase Orf2
PTA_PTB PF01515 Family 17 11507 286.4 29 52.7 Changed Phosphate acetyl/butaryl transferase
PTB PF08416 Domain 11 4887 129.9 37 11.67 Changed Phosphotyrosine-binding domain
PTCB-BRCT PF12738 Family 35 9607 63.4 26 10.21 Changed twin BRCT domain
PTCRA PF15028 Domain 6 130 121.7 64 47.19 Changed Pre-T-cell antigen receptor
PTE PF02126 Domain 3 2308 293.7 28 92.63 Changed Phosphotriesterase family
PTEN_C2 PF10409 Domain 48 7331 135.9 28 12.67 Changed C2 domain of PTEN tumour-suppressor protein
Pterin_4a PF01329 Domain 481 7668 90.4 31 68.3 Changed Pterin 4 alpha carbinolamine dehydratase
Pterin_bind PF00809 Domain 29 17866 234.9 28 39.14 Changed Pterin binding enzyme
PTH2 PF01981 Family 274 4242 108.2 33 54.54 Changed Peptidyl-tRNA hydrolase PTH2
PTN13_u3 PF16599 Family 17 708 181.7 49 7.89 Changed Unstructured linker region on PTN13 protein between PDZ
PTN_MK_C PF01091 Domain 20 1113 60.8 46 39.46 Changed PTN/MK heparin-binding protein family, C-terminal domain
PTN_MK_N PF05196 Domain 12 800 59.3 61 35.69 Changed PTN/MK heparin-binding protein family, N-terminal domain
PTP2 PF17022 Family 11 25 195.2 22 72.07 Changed Polar tube protein 2 from Microsporidia
PTPA PF03095 Family 247 3053 272.4 42 73.97 Changed Phosphotyrosyl phosphate activator (PTPA) protein
PTPLA PF04387 Family 213 3835 149.8 33 57.41 Changed Protein tyrosine phosphatase-like protein, PTPLA
PTPlike_phytase PF14566 Domain 41 3017 150.9 30 35.02 Changed Inositol hexakisphosphate
PTPRCAP PF15713 Family 15 156 146.5 49 62.55 Changed Protein tyrosine phosphatase receptor type C-associated
PTPS PF01242 Domain 87 8186 128.7 26 88.34 Changed 6-pyruvoyl tetrahydropterin synthase
PTPS_related PF10131 Family 9 122 430.8 14 60.45 Changed 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein
PTP_N PF12453 Family 4 263 25.6 71 2.35 Changed Protein tyrosine phosphatase N terminal
PTP_tm PF18861 Family 39 1650 130.2 31 8 Changed TM proximal of protein tyrosine phosphatase, receptor type J
PTR PF12789 Repeat 16 2105 46.7 38 23.74 Changed Phage tail repeat like
PTR2 PF00854 Family 21 30082 322.9 20 70.45 Changed POT family
PTRF_SDPR PF15237 Family 22 1305 209.4 40 65.65 Changed PTRF/SDPR family
PTS-HPr PF00381 Domain 939 10932 81 30 48.56 Changed PTS HPr component phosphorylation site
PTSIIA_gutA PF03829 Family 79 626 112.9 31 90.98 Changed PTS system glucitol/sorbitol-specific IIA component
PTSIIB_sorb PF03830 Family 250 2492 146.4 31 74.2 Changed PTS system sorbose subfamily IIB component
PTS_2-RNA PF01885 Family 220 3410 172.1 33 55.97 Changed RNA 2'-phosphotransferase, Tpt1 / KptA family
PTS_EIIA_1 PF00358 Domain 606 6197 126 39 27.89 Changed phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PTS_EIIA_2 PF00359 Domain 84 13488 141.9 23 37.23 Changed Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PTS_EIIB PF00367 Domain 712 8986 33.7 43 6.76 Changed phosphotransferase system, EIIB
PTS_EIIC PF02378 Family 49 15740 297.3 19 56.75 Changed Phosphotransferase system, EIIC
PTS_EIIC_2 PF13303 Family 32 1308 322.5 31 93.61 Changed Phosphotransferase system, EIIC
PTS_IIA PF02255 Domain 188 1966 92.9 36 86.18 Changed PTS system, Lactose/Cellobiose specific IIA subunit
PTS_IIB PF02302 Domain 227 10502 89.2 20 26.78 Changed PTS system, Lactose/Cellobiose specific IIB subunit
PUA PF01472 Family 89 11510 75.2 27 19.99 Changed PUA domain
PUA_2 PF14306 Domain 61 4769 155.5 34 29.96 Changed PUA-like domain
PUA_3 PF17785 Domain 143 4079 64 28 15.7 Changed PUA-like domain
PUA_4 PF20260 Domain 84 7290 47.2 27 19.05 New RNA methyltransferase PUA domain
PUB PF09409 Domain 82 3529 80.9 24 14.26 Changed PUB domain
PUB_1 PF18486 Domain 4 183 64.5 83 6.17 Changed PNGase/UBA- or UBX-containing domain
PUCC PF03209 Family 9 998 378.7 32 82.47 Changed PUCC protein
PucR PF07905 Family 165 5037 118.9 28 23.69 Changed Purine catabolism regulatory protein-like family
PUD PF03714 Domain 119 1625 98 27 12.07 Changed Bacterial pullanase-associated domain
PUD1_2 PF18457 Domain 25 145 133.1 27 66.02 Changed Up-Regulated in long-lived daf-2
PUF PF00806 Repeat 1109 65868 33.2 25 24.7 Changed Pumilio-family RNA binding repeat
PUFD PF16553 Domain 12 917 112.5 63 7.4 Changed BCORL-PCGF1-binding domain
PufQ PF05398 Family 6 119 74 44 93.43 Changed PufQ cytochrome subunit
PUL PF08324 Repeat 174 2484 258.6 21 36.39 Changed PUL domain
PulA_N1 PF17999 Domain 40 147 84.7 30 12.24 Changed Pullulanase N1-terminal domain
PulG PF11773 Family 6 42 79.1 36 84.81 Changed Type II secretory pathway pseudopilin
Pullulanase_Ins PF18494 Domain 30 103 70.7 33 5.65 Changed Pullulanase Ins domain
Pullulanase_N2 PF17967 Domain 38 1147 114.5 32 8.75 Changed Pullulanase N2 domain
Pullul_strch_C PF11852 Family 68 1289 155.5 36 12.63 Changed Alpha-1,6-glucosidases, pullulanase-type, C-terminal
PUMA PF15826 Family 4 109 154.6 66 92.01 Changed Bcl-2-binding component 3, p53 upregulated modulator of apoptosis
PUNUT PF16913 Family 16 3104 269.5 34 81.37 Changed Purine nucleobase transmembrane transport
Pup PF05639 Family 23 1301 65.4 48 96.1 Changed Pup-like protein
Pup_ligase PF03136 Family 108 2694 436.6 49 91.06 Changed Pup-ligase protein
PurA PF04845 Family 5 1867 183.8 41 74.4 Changed PurA ssDNA and RNA-binding protein
PurK_C PF17769 Domain 107 7254 57.6 36 14.05 Changed Phosphoribosylaminoimidazole carboxylase C-terminal domain
PurL_C PF16904 Domain 2 3 89.3 40 14.9 Changed Phosphoribosylformylglycinamidine synthase II C-terminus
PurS PF02700 Family 297 4283 75.6 42 70.36 Changed Phosphoribosylformylglycinamidine (FGAM) synthase
Pur_ac_phosph_N PF16656 Domain 221 8130 98.2 24 17.47 Changed Purple acid Phosphatase, N-terminal domain
Pur_DNA_glyco PF02245 Domain 331 4195 178.1 37 83.02 Changed Methylpurine-DNA glycosylase (MPG)
PuR_N PF09182 Domain 77 1045 69.5 52 25.26 Changed Bacterial purine repressor, N-terminal
putAbiC PF16872 Family 17 212 82 27 26.56 Changed Putative phage abortive infection protein
Putative_G5P PF17426 Family 2 11 103.5 26 92.97 Changed Putative Gamma DNA binding protein G5P
Putative_PNPOx PF01243 Domain 117 27593 89.6 18 45.08 Changed Pyridoxamine 5'-phosphate oxidase
PutA_N PF18083 Domain 11 248 113 38 11.9 Changed Proline utilization A N-terminal domain
Put_DNA-bind_N PF06971 Family 201 3141 48.7 44 21.54 Changed Putative DNA-binding protein N-terminus
Put_Phosphatase PF06888 Family 9 2164 210.4 35 80 Changed Putative Phosphatase
PV-1 PF06637 Family 6 310 284.8 34 61.25 Changed PV-1 protein (PLVAP)
Pvc16_N PF14065 Domain 118 1401 178.5 20 70.54 Changed Pvc16 N-terminal domain
PvlArgDC PF01862 Family 88 529 156.6 29 90.86 Changed Pyruvoyl-dependent arginine decarboxylase (PvlArgDC)
PVL_ORF50 PF07768 Family 3 105 115 48 87.94 Changed PVL ORF-50-like family
PV_NSP1 PF12433 Family 2 3 81 54 12.25 Changed Parvovirus non-structural protein 1
PWI PF01480 Family 98 7030 69.5 28 9.32 Changed PWI domain
PWWP PF00855 Domain 198 18826 92.4 24 10.88 Changed PWWP domain
PX PF00787 Domain 65 39544 88 23 13.53 Changed PX domain
PXA PF02194 Family 280 5913 170.7 25 18.57 Changed PXA domain
PXB PF12828 Domain 75 1058 133.9 38 14.12 Changed PX-associated
pXO2-34 PF17362 Family 2 8 71.6 32 80.93 Changed Family of unknown function
pXO2-72 PF17443 Family 2 6 61.2 36 81.02 Changed Uncharacterized protein pXO2-72
PXPV PF12778 Repeat 9 156 21.7 61 24.28 Changed PXPV repeat (3 copies)
PXT1 PF15214 Family 6 74 49.4 66 38.09 Changed Peroxisomal testis-specific protein 1
PYC_OADA PF02436 Domain 373 7037 192.5 33 21.16 Changed Conserved carboxylase domain
pYEATS PF20305 Family 58 74 72.9 21 22.79 New prokaryotic YEATS domain
PYNP_C PF07831 Domain 44 5056 73.5 32 16.58 Changed Pyrimidine nucleoside phosphorylase C-terminal domain
PyocinActivator PF11112 Family 16 221 72.9 35 80.21 Changed Pyocin activator protein PrtN
Pyocin_S PF06958 Family 36 117 127.3 25 28.29 Changed S-type Pyocin
PyrBI_leader PF08052 Family 2 17 41.1 69 92.21 Changed PyrBI operon leader peptide
PyrI PF01948 Domain 207 1371 91.4 40 58.3 Changed Aspartate carbamoyltransferase regulatory chain, allosteric domain
Pyridoxal_deC PF00282 Domain 9 22160 309 21 63.15 Changed Pyridoxal-dependent decarboxylase conserved domain
Pyridox_oxase_2 PF12766 Family 47 1471 105 30 41.43 Changed Pyridoxamine 5'-phosphate oxidase
Pyridox_ox_2 PF12900 Family 79 6659 136.9 21 71.61 Changed Pyridoxamine 5'-phosphate oxidase
Pyrid_oxidase_2 PF13883 Domain 30 2942 157.5 25 58.28 Changed Pyridoxamine 5'-phosphate oxidase
Pyrid_ox_like PF16242 Domain 18 3316 144.9 24 83.34 Changed Pyridoxamine 5'-phosphate oxidase like
PYRIN PF02758 Domain 180 4792 74.6 27 12.01 Changed PAAD/DAPIN/Pyrin domain
PyrI_C PF02748 Domain 129 1458 47.4 36 28.23 Changed Aspartate carbamoyltransferase regulatory chain, metal binding domain
Pyrophosphatase PF00719 Domain 498 10593 157.3 37 70.36 Changed Inorganic pyrophosphatase
Pyr_excise PF03013 Domain 81 1213 83 27 50.49 Changed Pyrimidine dimer DNA glycosylase
Pyr_redox PF00070 Domain 90 382 66.6 23 16.59 Changed Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_2 PF07992 Domain 64 146063 287 17 58.26 Changed Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3 PF13738 Family 60 0 0 0 0 Changed Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_dim PF02852 Domain 82 37449 109.4 28 22.43 Changed Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PYST-C1 PF09690 Domain 10 19 57.6 42 42.87 Changed Plasmodium yoelii subtelomeric region (PYST-C1)
PY_rept_46 PF09689 Disordered 6 37 46.5 62 82.7 Changed Plasmodium yoelii repeat (PY_rept_46)
P_C PF06640 Family 2 62 159.3 40 59.17 Changed P protein C-terminus
P_C10 PF14974 Family 18 462 95.2 51 43.56 Changed Protein C10
P_gingi_FimA PF06321 Domain 32 211 173.6 12 33.49 Changed Major fimbrial subunit protein (FimA)
P_proprotein PF01483 Family 42 8112 87.5 34 10.73 Changed Proprotein convertase P-domain
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