!!

Powering down the Pfam website
On October 5th, we will start redirecting the traffic from Pfam (pfam.xfam.org) to InterPro (www.ebi.ac.uk/interpro). The Pfam website will be available at legacy.pfam.xfam.org until January 2023, when it will be decommissioned. You can read more about the sunset period in our blog post.

Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: A0A175WFH7_9PEZI (A0A175WFH7)

Summary

This is the summary of UniProt entry A0A175WFH7_9PEZI (A0A175WFH7).

Description: DNA-directed RNA polymerase I subunit rpa49 {ECO:0000313|EMBL:KXX82538.1}
Source organism: Madurella mycetomatis (NCBI taxonomy ID 100816)
Length: 442 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

Show or hide the data used to generate the graphic in JSON format.

Source Domain Start End
disorder n/a 1 30
disorder n/a 37 40
disorder n/a 50 54
Pfam RNA_pol_I_A49 61 433
disorder n/a 69 73
disorder n/a 75 108
disorder n/a 145 169
disorder n/a 205 215
disorder n/a 220 221
disorder n/a 223 228
disorder n/a 230 233
disorder n/a 326 328
disorder n/a 330 333
disorder n/a 439 442

Show or hide domain scores.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession A0A175WFH7. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MADSPQKKRR RPAEDAPQPR KKKVEFQQDQ PAIASSFSVT KLRKPQVSPP
50
51
VVALSPGISL PDSFPFNVYE KAEKSTAKRR KSGSLPAQSE MALHSSAHRS
100
101
IDYTAREERH KSVDTLLNHF LAVIDPLSGE VEVIQAKKMV VRGTVRSKQA
150
151
LSQAMEEEPA KPTFSDMKME LGEAFGTKKA KKALQAVAEN AMLAAKSSGK
200
201
LGQEDRALVD TIKDSSHHMA TREELQAAID SARPVPRGNL DAQDIQDVYV
250
251
PAEIIGAEVL NAIPVMDWQE KVKKLEPVEV PSRFVAHRIN RVASNEDAVQ
300
301
RLKVMRYLLW VIVFWATTAQ GRERGTKRIG KRDRLRQVMS PAPEVVIENI
350
351
RRKFSDNGVM RKVHIDLLMT HCCVFASIID NFEVNTFDLR EDLRLEQKEL
400
401
NQYFMEIGAR MKQSKAGDQV NHIAKLALPL QFPKMRQPAR RR        
442
 

Show the unformatted sequence.

Checksums:
CRC64:8C7B9F8076966C9D
MD5:c46db80903eb86ac70c754199db94d77

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;