!!

Powering down the Pfam website
On October 5th, we will start redirecting the traffic from Pfam (pfam.xfam.org) to InterPro (www.ebi.ac.uk/interpro). The Pfam website will be available at legacy.pfam.xfam.org until January 2023, when it will be decommissioned. You can read more about the sunset period in our blog post.

Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RM04_PICGU (A5DH98)

Summary

This is the summary of UniProt entry RM04_PICGU (A5DH98).

Description: 54S ribosomal protein L4, mitochondrial
Source organism: Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) (Yeast) (Candida guilliermondii) (NCBI taxonomy ID 294746)
Length: 295 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

Show or hide the data used to generate the graphic in JSON format.

Source Domain Start End
disorder n/a 36 37
Pfam MRP-L47 49 142

Show or hide domain scores.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession A5DH98. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MKTVARALSG SARAMARKPM RFTDLRTVQL RPPIVPTHRN FEVSPDHPLW
50
51
AFFPDGNNSQ TCYREASDLD IQSRAWTTAE LRRKSFEDLH QLWYLVLKER
100
101
NVLAREVRLA DAINERNTHV HDQVDEKLLL TQKRIKQVLL ERQTAFERVQ
150
151
TFTQQQQEYL EEFRQRYLDA DASQIASYNE KLIRLQYAFF GIQPQLEDYN
200
201
WETDINERFV DGLNYVSHIK LARYFAQNPD VEEEIGYPLK GVVEELPFLL
250
251
RDPSEAVEEV RALRQSGAQV KLDKIDVLPF LRSALQAALE QEGRM     
295
 

Show the unformatted sequence.

Checksums:
CRC64:3E8DF47DF4A7B43E
MD5:b219994e2067d087888b24f8f676bbff

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;