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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: HOA_SHEWM (B1KJK9)

Summary

This is the summary of UniProt entry HOA_SHEWM (B1KJK9).

Description: 4-hydroxy-2-oxovalerate aldolase {ECO:0000255|HAMAP-Rule:MF_01656}
Source organism: Shewanella woodyi (strain ATCC 51908 / MS32) (NCBI taxonomy ID 392500)
Length: 339 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
Pfam HMGL-like 7 266
low_complexity n/a 224 234
Pfam DmpG_comm 275 337

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession B1KJK9. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MNISNKKIIL HDMCLRDGMH AKRHQISLAE MTQLATALDD AGVPLIEVTH
50
51
GDGLGGNSVN YGFAAHSDEE YLSTVIPLMK QAKISALLLP GIGTVDHLRM
100
101
AHELGVSTIR VAAQCTEADV TEQHISLSRQ LGLDTVGFLM MAHMLEPKAL
150
151
LEQAKLMESY GANCIYCTDS AGYMLQDDVF ERISVLRDGL KPDTQIGFHG
200
201
HHNLALGVAN SLTAVEAGAE RIDGSAAGLG AGAGNTPLEV FNAVATRMGA
250
251
STDVDVFKLM AAAEEIVVPM MDQAIRVDRD SLVLGYAGVY SSFLLHAKRA
300
301
AEKYGVPSEA ILLKLGQMKT VGGQEDMIED VAINLAKSR            
339
 

Show the unformatted sequence.

Checksums:
CRC64:B8F3478D97863A9F
MD5:d94650f9fe6be61983a2725f3450215a

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;