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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: B5DER5_RAT (B5DER5)

Summary

This is the summary of UniProt entry B5DER5_RAT (B5DER5).

Description: Coiled-coil-helix-coiled-coil-helix domain-containing 1 {ECO:0000313|EMBL:AAI68773.1, ECO:0000313|Ensembl:ENSRNOP00000012372}
Source organism: Rattus norvegicus (Rat) (NCBI taxonomy ID 10116)
Length: 118 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
disorder n/a 5 9
disorder n/a 11 17
disorder n/a 24 34
disorder n/a 39 43
Pfam CHCH 45 79
disorder n/a 85 113

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession B5DER5. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MATPSLRGRL ARFANPGKPI LKPNKPLILA NRVGNRRREK GEATCITEMS
50
51
MMMACWKQNE FRDEACRKEI QDFFDCSSKA QEAGKMRSIQ ETLGQSGSLP
100
101
PHKMTKLLQR FPNKSHLS                                   
118
 

Show the unformatted sequence.

Checksums:
CRC64:D2C554D9CF3437EC
MD5:13ce5b22079f4883844922e8e2999f21

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;