Summary
This is the summary of UniProt entry D4A9B0_RAT (D4A9B0).
| Description: | S1 RNA-binding domain 1 {ECO:0000313|Ensembl:ENSRNOP00000019895} |
| Source organism: |
Rattus norvegicus (Rat)
(NCBI taxonomy ID
10116)
|
| Length: | 983 amino acids |
| Reference Proteome: |
|
Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.
Pfam domains
Download the data used to generate the domain graphic in JSON format.
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| Source | Domain | Start | End |
|---|---|---|---|
| disorder | n/a | 1 | 169 |
| low_complexity | n/a | 23 | 36 |
| disorder | n/a | 176 | 199 |
| Pfam | Tex_N | 214 | 397 |
| coiled_coil | n/a | 257 | 284 |
| low_complexity | n/a | 400 | 413 |
| Pfam | Tex_YqgF | 533 | 659 |
| Pfam | HHH_3 | 699 | 763 |
| disorder | n/a | 783 | 804 |
| disorder | n/a | 808 | 809 |
| Pfam | HHH_9 | 809 | 886 |
| disorder | n/a | 847 | 851 |
| Pfam | S1 | 903 | 980 |
Show or hide domain scores.
Sequence information
This is the amino acid sequence of the UniProt sequence database entry with the accession D4A9B0. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.
| Sequence: | 1
MIAMPSLRKR TKIQTENAEP RDECSSFSEL SSGSEEDNKE DSIWEPQKKV
50 51
LRNRRRPASK GSKRKQGPRV KKSAQQVHDI SKDVAVKEEL NSPVAIVNAN
100 101
LEEENQKLHT TNTLKTAAKK QKNAGHGAKK RLKVDEETNQ ASPFEGGESN
150 151
VEAPSTSEDR DMCKKESEDS FTFEQSPLKR IKTESCPQGR PARVPGASDI
200 201
KEEVEMNWDI VQVLSERTNI EPWICANIIR LFNDDNTIPF IVRYRKELIN
250 251
NLDADFLREV RQTLDELRDV AKKVHSRIQK IKKEGKMSEC LLQALLNCKT
300 301
FEELEHVSAP YKMGSKGTKA QRAKQLGLEG AAWTLLENPG QLNLPSYIRP
350 351
DVKGLSELKD IETGVQHILA DMIAKDKDTL DFIRDLCKHR YICIQSSLAK
400 401
VSSKKVNEKE VDKFQLYQNF SCNIRNIHHH QILAINRGEN LKILTVKVNI
450 451
SDGVKNEFCR WCIQNRWRPR GFARPELMKI LHNSLDDSFK RLIVPLLCRE
500 501
LRAKLTSDAE KQSVMMFGQN LRQLLLTSPV PGRTLMGVDP GYKHGCKLAI
550 551
ISPTSQILHT DVVYLHCGQG FREAEKIKRL LLNFNCNTVV IGNGTACRET
600 601
EAYFADLIMK NYFAPLDVVY CIVSEAGASI YSVSPEANKE MPGLDPNLRS
650 651
AVSIARRVQD PLAELVKFDP KHIGVGMYQH DVSQTLLKAT LDSVVEECVS
700 701
FVGVDINICS EVLLRHIAGL NANRAKNIIE WREKNGPFIN REQLKKVKGL
750 751
GPKSFQQCAG FVRVNQDYIR TFCSGQHTDS SGQSQEAAMV TKEKPGKKKN
800 801
KADVALTPNP LDETCIHPES YDIAVRFLSF IGGTLYEIGK PEMQQKINSS
850 851
LGKEGIEKTA ERLQTTAHTL QVIIDGLSQP KTFDIRTDFD KPDFKRSIVC
900 901
LADLQVGTIL TGKVENATLF GVFVDIGVGK AGLIPIRFIT EAKLSKTKKR
950 951
RSLGLGPGEK VEVKVLSVDI PRSRISLDLL RVL
983
Show the unformatted sequence. |
| Checksums: |
CRC64:EF396D1FCAE63D4A
MD5:3fa23573b753c56f746c1bf662b1b843
|
TreeFam
Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.
AlphaFold Structure Prediction
The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.
Model confidence scale
| Very High (pLDDT > 90) | |
| Confident (90 > pLDDT > 70) | |
| Low (70 > pLDDT > 50) | |
| Very Low (pLDDT < 50) |
