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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: D4ABN7_RAT (D4ABN7)

Summary

This is the summary of UniProt entry D4ABN7_RAT (D4ABN7).

Description: Protein-arginine deiminase {ECO:0000256|ARBA:ARBA00012200, ECO:0000256|PIRNR:PIRNR001247}
Source organism: Rattus norvegicus (Rat) (NCBI taxonomy ID 10116)
Length: 683 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
Pfam PAD_N 1 112
disorder n/a 77 81
Pfam PAD_M 114 270
disorder n/a 158 181
Pfam PAD 281 680

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession D4ABN7. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSFQSTLSLS LDSPTHAICM VGMEITLDIS GCAPDKCESF TIRGSPRVLI
50
51
HISSSVITGK EDAVVWRPMK QPTEALVRMV SPSPTVDEDK VLVSYYCPDK
100
101
EVPTATAVLF LTGIEVSLEA DIYRDGQLDM PSDKQAKKRW MWGLNGWGAI
150
151
LLVNCNPETP SQSDEQSGAQ ESPREIQNLS QMTLTVEGPT SILRDYQLLL
200
201
HTSKEEAKKT RVYWAHRGAS AYELVVGPDK PFHILPTFDT RGKETFYIEA
250
251
TEFPSPSFSG LISFSVSLIE QAHDQLIPET PLYKDTVMFR VAPYIFLPST
300
301
QLPLEVYLCR ELQLQGFVDS VTKLSEKSNV QVASVYEDPN RQGRWLQDEM
350
351
AFCYTQAPHK TLSFILDTPR VAKLEDFPMK YSLSPGVGYL IQETEDHRVA
400
401
SLDSVGNLIV SPPVKAQGKD YPLGRILIGG SFYPSFEGRD MSKALRDFVY
450
451
AQQVQAPVEL FSDWLMTGHV DQFLCFVPVD DKNSDRKGFR LLLASPSACY
500
501
ELFEQKQKEG FGDVTLFEDV RAEQLISNGR EVKTISQILA DENLREQNAY
550
551
VEKCISLNRT LLKKELGLVD NDFIRIPQLF CLEPLTNVPS NQQTSKLFAR
600
601
PYFPDMLQMI VLGKNIGIPK PFGPQIKGTC CLEETVCGLL EPLGLKCTFI
650
651
DDFDCYLANI GDACASVIVN RVPFAFKWWK MNP                  
683
 

Show the unformatted sequence.

Checksums:
CRC64:CA28C7D163EBAC0F
MD5:2a4872b5197ae22465cb8a4087e0acc6

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;