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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: E9QCP4_DANRE (E9QCP4)

Summary

This is the summary of UniProt entry E9QCP4_DANRE (E9QCP4).

Description: Lysosomal-associated membrane protein 1b {ECO:0000313|Ensembl:ENSDARP00000123215}
Source organism: Danio rerio (Zebrafish) (Brachydanio rerio) (NCBI taxonomy ID 7955)
Length: 253 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
sig_p n/a 1 29
disorder n/a 31 60
low_complexity n/a 33 54
Pfam Lamp 54 202
low_complexity n/a 123 135
transmembrane n/a 218 241
low_complexity n/a 219 241

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession E9QCP4. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MISIIPKQNR PVGAIFSLLL ALTIHQTLTS NVPTTAATPE TSSPPASPVT
50
51
PGPPERGNYN VTNANDTVCL LARMALQLNI SFTSTSQGKL VQEVLNLHPN
100
101
LVKFSGSCES DRASLILTED NITLTFSFSL NSTSNKYHLS GLELSASLPD
150
151
MAKGLVVRNT TLNYLVGTLG HSYMCQKEKT LSVTQNFSLN TFQLQVQPFG
200
201
VKGDFGAAEE CELDEDDMLI PIVVGAALAV LVLIVILAYL IGRNRSHAGY
250
251
QTI                                                   
253
 

Show the unformatted sequence.

Checksums:
CRC64:A49C85ADBD2ECE60
MD5:ac5fa63757ab53d70cad44a1d6a2289a

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;