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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: F1QIM0_DANRE (F1QIM0)

Summary

This is the summary of UniProt entry F1QIM0_DANRE (F1QIM0).

Description: TSEN54 tRNA-splicing endonuclease subunit {ECO:0000313|Ensembl:ENSDARP00000053481}
Source organism: Danio rerio (Zebrafish) (Brachydanio rerio) (NCBI taxonomy ID 7955)
Length: 397 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
Pfam tRNA_int_end_N2 1 29
disorder n/a 78 138
low_complexity n/a 90 102
disorder n/a 146 172
disorder n/a 180 198
disorder n/a 220 237
low_complexity n/a 223 238
disorder n/a 260 262
low_complexity n/a 261 266
disorder n/a 265 281
disorder n/a 285 287

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession F1QIM0. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MGFSERGKQY LQPEEALYLM ECGNVQVFYR DLPLSIQDGY ERFLSSDTVT
50
51
LHQYQVFGHL KRLGYVVNRF DPSSVSSTYE RQLNLPASDK QKKQLKRKRS
100
101
QSPVSSDKHG ISTEEKTTSE AHNELAETSK LPADLQEPVH LADAPERTWW
150
151
MEEDVQQKHP KTQTAAPRWD FSSISFPDLG SRRRSERLAS PHRSLLPENV
200
201
DVGECDVSRW LGRLNMKQEK LSRRDMERQR ERDRYRRDVN SDREVRRCRN
250
251
WAEYSELMEE RRRRRRKHRP EHLWEREETP LTQPGQCTSH RELLDQIGII
300
301
KSSTFSEGLS RLSPSDQWKI SFDVYQPDTV AEFKKSHPGK PYTRMCVCSF
350
351
AGPVPDLHAV KQLSFQSQDV PVTFAVVDHG DISFYCFKDF KLPTDVY   
397
 

Show the unformatted sequence.

Checksums:
CRC64:56D0E272BD8881BF
MD5:a972932d78ac39bc3f165f8eacf302c4

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;