!!

Powering down the Pfam website
On October 5th, we began redirecting traffic from Pfam (pfam.xfam.org) to InterPro (www.ebi.ac.uk/interpro). The Pfam website will remain available at pfam-legacy.xfam.org until January 2023, when it will be decommissioned. You can read more about the sunset period in our blog post.

Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: K0F5W9_9NOCA (K0F5W9)

Summary

This is the summary of UniProt entry K0F5W9_9NOCA (K0F5W9).

Description: AraC family transcriptional regulator {ECO:0000313|EMBL:AFU04725.1}
Source organism: Nocardia brasiliensis ATCC 700358 (NCBI taxonomy ID 1133849)
Length: 244 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

Show or hide the data used to generate the graphic in JSON format.

Source Domain Start End
Pfam DUF6597 14 94
low_complexity n/a 132 143
Pfam HTH_18 155 233
low_complexity n/a 181 196
disorder n/a 242 243

Show or hide domain scores.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession K0F5W9. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MGAGGYRERP SRFASAVAWT RTVTARDATV PVLPDGCMDL LWVGGRLMVA
50
51
GPDTRAFRPV VAADTRYAGL RFAPGTAPAL LGVPAAELRD QRVELAQIWS
100
101
SASVRQLADQ VTEASDPLAA MEAIVLRRAT EVPPPDPVLR RVVSALDAGW
150
151
SVGATAAAVG LNARLLHRRS LAAFGYGPKT LARVLRLQRA LAQARAGVSF
200
201
AATAVGAGYA DQAHLAREVR DLTGMPLGQV LTRSGTAADQ ASVG      
244
 

Show the unformatted sequence.

Checksums:
CRC64:D63F3D01EDA4DD1A
MD5:2bede80287073ebd7fd22a8723aa2737

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;