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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RPA49_SCHPO (O14086)

Summary

This is the summary of UniProt entry RPA49_SCHPO (O14086).

Description: DNA-directed RNA polymerase I subunit rpa49
Source organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (NCBI taxonomy ID 284812)
Length: 425 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
disorder n/a 1 15
disorder n/a 17 22
disorder n/a 24 26
low_complexity n/a 27 37
Pfam RNA_pol_I_A49 47 416
disorder n/a 52 57
disorder n/a 63 64
disorder n/a 66 73
disorder n/a 78 79
disorder n/a 131 133
disorder n/a 159 162
disorder n/a 195 198
disorder n/a 200 203
disorder n/a 206 207
transmembrane n/a 279 296
low_complexity n/a 340 351
disorder n/a 422 425

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession O14086. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAGDELKGKK RKYRDSHSGD EKSVKILPLS ESSLPPLVTT ISGFYPPENT
50
51
RFQLLKKSNQ SNRDASLIGR TERVQFEAKN QSTATVEANY CLAVADKTGR
100
101
VKKIVPAKYL NTFERNILAL QEKDKFLKKK HGTVSGTVME QRANLGLAFG
150
151
TRKSQKAIME ESANRVKAET LGDVKDQLVS NVQKATEALP TQEDIAAAQA
200
201
QDRPIPPVNV GAESIEDAYK LEDIIPKEEF SAIYIKPLLE NPDERNWAKL
250
251
LPYRHSLFIN ERFQRLLSIE EVDQKRARIL YYISLLQAFL FSRRSVGNRE
300
301
TLRKKLADPP EILIDGLIKR FTQTTGIGSV QVSSREVDKI ICYILVLCLI
350
351
VDNYSTDVLT LANDLNVKTM KANELFRTVG CRIMAYTETQ RMALGLNKTD
400
401
AKNHKRAVLK IPLEFPKPRR GRARN                           
425
 

Show the unformatted sequence.

Checksums:
CRC64:1191EC48E6A75A76
MD5:af71d8f98be58905d283cc1ecd87d77b

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;