!!

Powering down the Pfam website
On October 5th, we will start redirecting the traffic from Pfam (pfam.xfam.org) to InterPro (www.ebi.ac.uk/interpro). The Pfam website will be available at legacy.pfam.xfam.org until January 2023, when it will be decommissioned. You can read more about the sunset period in our blog post.

Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: YI48_SCHPO (P0CU04)

Summary

This is the summary of UniProt entry YI48_SCHPO (P0CU04).

Description: Putative cell agglutination protein SPAC1348.08c {ECO:0000305}
Source organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (NCBI taxonomy ID 284812)
Length: 416 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

Show or hide the data used to generate the graphic in JSON format.

Source Domain Start End
sig_p n/a 1 27
disorder n/a 62 74
low_complexity n/a 66 81
low_complexity n/a 80 102
low_complexity n/a 93 107
disorder n/a 99 100
disorder n/a 103 105
disorder n/a 111 112
disorder n/a 114 126
disorder n/a 130 131
disorder n/a 151 154
disorder n/a 157 158
disorder n/a 163 164
disorder n/a 167 169
low_complexity n/a 169 183
Pfam GLEYA 279 377
disorder n/a 410 416

Show or hide domain scores.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P0CU04. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MNFFLYFRTI FLIQLYFFNY STFGCSASST SVQSDTTNQV SVSCPKYTTI
50
51
YTSGTSPDTK TIYPESTSTK SITTSTQSHS SPVIVVSTVG TVTETTISGS
100
101
TEYTTTIPAE GITSGTVEIV EPTAGTVTET ITSGTLPFTT TLAQASGTVS
150
151
GTVEIVSPKN NPTTVYSGTV ATTETFSSST VVVIPTAICD GVRGLEYAVY
200
201
DYTISSSMNE FCYPKNGQTD VFAFNEPAYF GSSDLDQSSP LFTGVFSSTD
250
251
DIPEWASSWY LPPYPPQASD MASTYCACKV IVYQFFLRIP ETDTYTLVVN
300
301
NVDDVFFGWF GDKAISGWSN NNFDAYSYWH ESPNMGLGTV GMGNFTVGNY
350
351
PEGYFLPVRF VVANGAYIGG FDFYFTSDST GPLATTSYSY TKTCTQQFLP
400
401
FGQGNGGVNG PTEKLS                                     
416
 

Show the unformatted sequence.

Checksums:
CRC64:A9F7EC0EE38DE62C
MD5:9ac7c5c76186e7d475accb6d40612abf

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;