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2  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: PYC_HUMAN (P11498)

Summary

This is the summary of UniProt entry PYC_HUMAN (P11498).

Description: Pyruvate carboxylase, mitochondrial EC=6.4.1.1
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
Length: 1178 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
Pfam Biotin_carb_N 36 146
Pfam CPSase_L_D2 151 360
low_complexity n/a 157 169
Pfam Biotin_carb_C 375 483
disorder n/a 389 392
disorder n/a 441 443
disorder n/a 487 488
disorder n/a 514 532
low_complexity n/a 527 540
Pfam HMGL-like 563 837
low_complexity n/a 689 703
low_complexity n/a 785 799
Pfam PYC_OADA 861 1061
disorder n/a 861 862
Pfam Biotin_lipoyl 1110 1177
disorder n/a 1160 1161

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P11498. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MLKFRTVHGG LRLLGIRRTS TAPAASPNVR RLEYKPIKKV MVANRGEIAI
50
51
RVFRACTELG IRTVAIYSEQ DTGQMHRQKA DEAYLIGRGL APVQAYLHIP
100
101
DIIKVAKENN VDAVHPGYGF LSERADFAQA CQDAGVRFIG PSPEVVRKMG
150
151
DKVEARAIAI AAGVPVVPGT DAPITSLHEA HEFSNTYGFP IIFKAAYGGG
200
201
GRGMRVVHSY EELEENYTRA YSEALAAFGN GALFVEKFIE KPRHIEVQIL
250
251
GDQYGNILHL YERDCSIQRR HQKVVEIAPA AHLDPQLRTR LTSDSVKLAK
300
301
QVGYENAGTV EFLVDRHGKH YFIEVNSRLQ VEHTVTEEIT DVDLVHAQIH
350
351
VAEGRSLPDL GLRQENIRIN GCAIQCRVTT EDPARSFQPD TGRIEVFRSG
400
401
EGMGIRLDNA SAFQGAVISP HYDSLLVKVI AHGKDHPTAA TKMSRALAEF
450
451
RVRGVKTNIA FLQNVLNNQQ FLAGTVDTQF IDENPELFQL RPAQNRAQKL
500
501
LHYLGHVMVN GPTTPIPVKA SPSPTDPVVP AVPIGPPPAG FRDILLREGP
550
551
EGFARAVRNH PGLLLMDTTF RDAHQSLLAT RVRTHDLKKI APYVAHNFSK
600
601
LFSMENWGGA TFDVAMRFLY ECPWRRLQEL RELIPNIPFQ MLLRGANAVG
650
651
YTNYPDNVVF KFCEVAKENG MDVFRVFDSL NYLPNMLLGM EAAGSAGGVV
700
701
EAAISYTGDV ADPSRTKYSL QYYMGLAEEL VRAGTHILCI KDMAGLLKPT
750
751
ACTMLVSSLR DRFPDLPLHI HTHDTSGAGV AAMLACAQAG ADVVDVAADS
800
801
MSGMTSQPSM GALVACTRGT PLDTEVPMER VFDYSEYWEG ARGLYAAFDC
850
851
TATMKSGNSD VYENEIPGGQ YTNLHFQAHS MGLGSKFKEV KKAYVEANQM
900
901
LGDLIKVTPS SKIVGDLAQF MVQNGLSRAE AEAQAEELSF PRSVVEFLQG
950
951
YIGVPHGGFP EPFRSKVLKD LPRVEGRPGA SLPPLDLQAL EKELVDRHGE
1000
1001
EVTPEDVLSA AMYPDVFAHF KDFTATFGPL DSLNTRLFLQ GPKIAEEFEV
1050
1051
ELERGKTLHI KALAVSDLNR AGQRQVFFEL NGQLRSILVK DTQAMKEMHF
1100
1101
HPKALKDVKG QIGAPMPGKV IDIKVVAGAK VAKGQPLCVL SAMKMETVVT
1150
1151
SPMEGTVRKV HVTKDMTLEG DDLILEIE                        
1178
 

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Checksums:
CRC64:381F527553A20095
MD5:ffb345a67c23bfba2840433e2d4f871f

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Biotin_lipoyl 1110 - 1177 3BG3 A 1110 - 1177 Show 3D Structure View in InterPro
D 1110 - 1177 Show 3D Structure View in InterPro
HMGL-like 563 - 837 3BG3 A 563 - 837 Show 3D Structure View in InterPro
B 563 - 837 Show 3D Structure View in InterPro
C 563 - 837 Show 3D Structure View in InterPro
D 563 - 837 Show 3D Structure View in InterPro
3BG9 A 563 - 837 Show 3D Structure View in InterPro
B 563 - 837 Show 3D Structure View in InterPro
C 563 - 837 Show 3D Structure View in InterPro
D 563 - 837 Show 3D Structure View in InterPro
PYC_OADA 861 - 1061 3BG3 A 861 - 1061 Show 3D Structure View in InterPro
B 861 - 1061 Show 3D Structure View in InterPro
C 861 - 1061 Show 3D Structure View in InterPro
D 861 - 1061 Show 3D Structure View in InterPro
3BG9 A 861 - 1061 Show 3D Structure View in InterPro
B 861 - 1061 Show 3D Structure View in InterPro
C 861 - 1061 Show 3D Structure View in InterPro
D 861 - 1061 Show 3D Structure View in InterPro
×

The parts of the structure corresponding to the Pfam family are highlighted in blue.

Loading Structure Data

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;