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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: LAMP1_RAT (P14562)

Summary

This is the summary of UniProt entry LAMP1_RAT (P14562).

Description: Lysosome-associated membrane glycoprotein 1
Source organism: Rattus norvegicus (Rat) (NCBI taxonomy ID 10116)
Length: 407 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
sig_p n/a 1 26
low_complexity n/a 2 25
disorder n/a 126 130
disorder n/a 134 138
disorder n/a 180 212
low_complexity n/a 191 212
Pfam Lamp 209 355
transmembrane n/a 372 395
low_complexity n/a 376 396

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P14562. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAAPGARRPL LLLLLAGLAH SAPALFEVKD NNGTACIMAS FSASFLTTYD
50
51
AGHVSKVSNM TLPASAEVLK NSSSCGEKNA SEPTLAITFG EGYLLKLTFT
100
101
KNTTRYSVQH MYFTYNLSDT QFFPNASSKG PDTVDSTTDI KADINKTYRC
150
151
VSDIRVYMKN VTIVLWDATI QAYLPSSNFS KEETRCPQDQ PSPTTGPPSP
200
201
SPPLVPTNPS VSKYNVTGDN GTCLLASMAL QLNITYMKKD NTTVTRAFNI
250
251
NPSDKYSGTC GAQLVTLKVG NKSRVLELQF GMNATSSLFF LQGVQLNMTL
300
301
PDAIEPTFST SNYSLKALQA SVGNSYKCNS EEHIFVSKAL ALNVFSVQVQ
350
351
AFRVESDRFG SVEECVQDGN NMLIPIAVGG ALAGLVLIVL IAYLIGRKRS
400
401
HAGYQTI                                               
407
 

Show the unformatted sequence.

Checksums:
CRC64:25947490749A7C88
MD5:759061236de0ee252f93dce1a63f6d9d

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;