!!

Powering down the Pfam website
On October 5th, we will start redirecting the traffic from Pfam (pfam.xfam.org) to InterPro (www.ebi.ac.uk/interpro). The Pfam website will be available at legacy.pfam.xfam.org until January 2023, when it will be decommissioned. You can read more about the sunset period in our blog post.

Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: PADI2_RAT (P20717)

Summary

This is the summary of UniProt entry PADI2_RAT (P20717).

Description: Protein-arginine deiminase type-2
Source organism: Rattus norvegicus (Rat) (NCBI taxonomy ID 10116)
Length: 665 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

Show or hide the data used to generate the graphic in JSON format.

Source Domain Start End
Pfam PAD_N 1 114
disorder n/a 53 57
disorder n/a 63 65
disorder n/a 80 83
disorder n/a 90 94
disorder n/a 96 97
Pfam PAD_M 116 274
disorder n/a 124 139
Pfam PAD 284 662

Show or hide domain scores.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P20717. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MLRERTVRLQ YGSRVEAVYV LGTQLWTDVY SAAPAGAKTF SLKHSEGVKV
50
51
EVVRDGEAEE VVTNGKQRWA LSPSTTLRLS MAQASTEASS DKVTVNYYEE
100
101
DGSAPIDQAG LFLTAIEISL DVDADRDGEV EKNNPKKASW TWGPEGQGAI
150
151
LLVNCDRDTP WLPKEDCSDE KVYSKQDLQD MSQMILRTKG PDRLPAGYEI
200
201
VLYISMSDSD KVGVFYVENP FFGQRYIHIL GRQKLYHVVK YTGGSAELLF
250
251
FVEGLRFPDE SFSGLVSIHV SLLEYMAEDI PLTPIFTDTV TFRIAPWIMT
300
301
PNILPPVSVF VCCMKDNYLF LKEVKNLVEK TNCELKVCFQ YMNRGDRWIQ
350
351
DEIEFGYIEA PHKGFPVVLD SPRDGNLKDF PIKQLLGPDF GYVTREPLFE
400
401
TVTSLDSFGN LEVSPPVTVN GKAYPLGRIL IGSSFPLSGG RRMTKVVRDF
450
451
LQAQQVQAPV ELYSDWLTVG HVDEFMTFVP IPGKKEFRLL MASTSACYQL
500
501
FREKQKEGHG EAIMFKGLGG MSSKRITINK ILSNESLTQE NQYFQRCLDW
550
551
NRDILKKELA LTEKDIIDLP ALFKMDEDRQ ARAFFPNMVN MIVLDKDLGI
600
601
PKPFGPQVEE ECCLETHVRG LLEPLGLACT FIDDISAYHK FLGEVHCGTN
650
651
VRRKPFTFKW WHMVP                                      
665
 

Show the unformatted sequence.

Checksums:
CRC64:96C38C8ECD7A0799
MD5:72aaccbf9727e03a73f39693bf852e99

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;