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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: YKQA_BACSU (P39759)

Summary

This is the summary of UniProt entry YKQA_BACSU (P39759).

Description: Putative gamma-glutamylcyclotransferase YkqA EC=2.3.2.-
Source organism: Bacillus subtilis (strain 168) (NCBI taxonomy ID 224308)
Length: 277 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
Pfam GGACT 5 117
Pfam AIG2_2 185 267
disorder n/a 270 271
disorder n/a 274 275

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P39759. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MNSLLFVYGT LRKHEKNHHL LAQSACINEQ ARTKGSLFAA KEGPTVVFND
50
51
EDEGYIYGEV YEADELCIHK LDQFFQGYHK QTVFVETDVG IKIALIYFMN
100
101
KDGCAGFTKI SSGDWKEHQM ISKSKNPIYY FAYGSCMDNA RFQKAGVDHY
150
151
FQDPVGRAVL KGYTTRFTLK REDGSRADML EDGGTTEGVL YRIPYSALSY
200
201
LYKREGVESL TYRPAFVDVE AGGRHYKDCL TFLVLQKEAE IAPPQHYQIE
250
251
IERGAELYLS PEFTEKLKRH MNSLPKG                         
277
 

Show the unformatted sequence.

Checksums:
CRC64:A7191FBEF4C56DE3
MD5:4196feac02607efdc49f0443ce6928d6

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
AIG2_2 185 - 267 2QIK A 186 - 268 Show 3D Structure View in InterPro
GGACT 5 - 117 2QIK A 5 - 118 Show 3D Structure View in InterPro
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The parts of the structure corresponding to the Pfam family are highlighted in blue.

Loading Structure Data

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;