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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: SEN54_YEAST (Q02825)

Summary

This is the summary of UniProt entry SEN54_YEAST (Q02825).

Description: tRNA-splicing endonuclease subunit SEN54
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (NCBI taxonomy ID 559292)
Length: 467 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
disorder n/a 1 33
low_complexity n/a 19 27
disorder n/a 47 56
Pfam tRNA_int_end_N2 75 144
disorder n/a 373 380
disorder n/a 382 396
low_complexity n/a 393 407
disorder n/a 398 413
disorder n/a 456 458
disorder n/a 461 467

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q02825. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MQFAGKKTDQ VTTSNPGFEE EEEEEEELQQ DWSQLASLVS KNAALSLPKR
50
51
GEKDYEPDGT NLQDLLLYNA SKAMFDTISD SIRGTTVKSE VRGYYVPHKH
100
101
QAVLLKPKGS FMQTMGRADS TGELWLDFHE FVYLAERGTI LPYYRLEAGS
150
151
NKSSKHETEI LLSMEDLYSL FSSQQEMDQY FVFAHLKRLG FILKPSNQEA
200
201
AVKTSFFPLK KQRSNLQAIT WRLLSLFKIQ ELSLFSGFFY SKWNFFFRKY
250
251
TTSPQLYQGL NRLVRSVAVP KNKKELLDAQ SDREFQKVKD IPLTFKVWKP
300
301
HSNFKKRDPG LPDFQVFVYN KNDDLQHFPT YKELRSMFSS LDYKFEFLSE
350
351
IEDDDDWETN SYVEDIPRKE YIHKRSAKSQ TEKSESSMKA SFQKKTAQSS
400
401
TKKKRKAYPP HIQQNRRLKT GYRSFIIAIM DNGLISFVKM SEADFGSESV
450
451
WYTPNTQKKV DQRWKKH                                    
467
 

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Checksums:
CRC64:363A703856DE724E
MD5:bdfec261b7e5af4742be3e8131876b03

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;