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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: Y1354_LACSS (Q38VX5)

Summary

This is the summary of UniProt entry Y1354_LACSS (Q38VX5).

Description: UPF0340 protein LCA_1354 {ECO:0000255|HAMAP-Rule:MF_00800}
Source organism: Lactobacillus sakei subsp. sakei (strain 23K) (NCBI taxonomy ID 314315)
Length: 183 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
Pfam DUF436 11 181

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q38VX5. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSINLNQIKQ DLTQITNDVL TAANLRRGDI FVLGCSTSEV VGGHIGKASS
50
51
REVGATIIET LLEILKPLDI QLAVQGCEHI NRSLVMERSV AEAHDFEIVS
100
101
VVPAMHAGGA CSVAAFEQYS DPVEVEHTVA HAGLDIGDTA IGMHVKFVQV
150
151
PVRPSLDTLG AAHVTALRSR PKYVGGPRAT YDI                  
183
 

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Checksums:
CRC64:ACF1284CD642B56D
MD5:6e4993be861eea61c5c4e700cc035e26

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;