!!

Powering down the Pfam website
On October 5th, we will start redirecting the traffic from Pfam (pfam.xfam.org) to InterPro (www.ebi.ac.uk/interpro). The Pfam website will be available at legacy.pfam.xfam.org until January 2023, when it will be decommissioned. You can read more about the sunset period in our blog post.

Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: Q54ND7_DICDI (Q54ND7)

Summary

This is the summary of UniProt entry Q54ND7_DICDI (Q54ND7).

Description: tRNA_int_end_N2 domain-containing protein {ECO:0000259|Pfam:PF12928}
Source organism: Dictyostelium discoideum (Slime mold) (NCBI taxonomy ID 44689)
Length: 588 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

Show or hide the data used to generate the graphic in JSON format.

Source Domain Start End
disorder n/a 1 42
low_complexity n/a 4 35
disorder n/a 47 97
low_complexity n/a 56 74
low_complexity n/a 69 99
Pfam tRNA_int_end_N2 109 175
disorder n/a 224 234
low_complexity n/a 226 260
disorder n/a 236 239
disorder n/a 270 321
low_complexity n/a 272 312
disorder n/a 326 330
disorder n/a 356 357
disorder n/a 360 388
disorder n/a 390 391
coiled_coil n/a 405 426
disorder n/a 406 460
low_complexity n/a 407 435
low_complexity n/a 431 449

Show or hide domain scores.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q54ND7. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MHTNNKKEKR NIDKNNKNNN NNNNDDEIEE DDSSELRKYF QKNGLIRKKV
50
51
GKKIVDNDNN NSILSNSIKN KSRNHNGGNN NNKEEEQIED EEDDDFEDKQ
100
101
PVFEQYKTIL ELHGKSTSKN SMSYGHWDSN LKKFEITLRK GKQFDSVGQQ
150
151
IGSKLYLHIE EAIYFQDLGI VELYINQLPL SVQESFKLFE IPSPSPFPIY
200
201
KYTAYCYLKK LGYILIRHDQ NNKSYSTSTS TSASTATATI KTANTITNNN
250
251
ILSNFNFKIL PTSELIKVIK FNNNNNNNNN NNNNNNNNNN NNNNNNNNNN
300
301
NNNNNNNNNN NNDDCSIDNT NEIMKIKTNL NTIKSRNFIP EVLNVYTDLK
350
351
GFKPFIEIKK PEDYVKPEFE NSSNSKFILS QKQDRDQLIQ SVYKSNKSIF
400
401
DKYNIVDLEE DEKEEENNNN SNDNDNDNKQ NKKNKRIKLH NNNNKNNNNQ
450
451
SLMNLPQDIY EGSHLNSINR KLQIFKVKSL LDDKEYQKVN INPNQFKIDY
500
501
DVYKPTQSFK RTNPGIPDFF LSISKFGVPI PSMNDIARLN SNSIVLPTGN
550
551
GSGGGDPISV PLQFCIVNLK DISFIEYKEN LVLSSALK             
588
 

Show the unformatted sequence.

Checksums:
CRC64:E47D406AEB33FA58
MD5:aece0b07ae71c896969d439736839386

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;