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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: LAMP3_RAT (Q5XI99)

Summary

This is the summary of UniProt entry LAMP3_RAT (Q5XI99).

Description: Lysosome-associated membrane glycoprotein 3
Source organism: Rattus norvegicus (Rat) (NCBI taxonomy ID 10116)
Length: 408 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
sig_p n/a 1 20
low_complexity n/a 7 16
disorder n/a 45 59
disorder n/a 64 68
disorder n/a 73 74
disorder n/a 111 133
disorder n/a 147 150
disorder n/a 152 155
disorder n/a 158 200
Pfam Lamp 216 358
transmembrane n/a 374 394
low_complexity n/a 374 393

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q5XI99. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MPGQTSAVAV LLCLAVILHG YQIREKEFPE ARGYLQYTAT TTEQITAKPP
50
51
LPLTNQTSHA TLASRSKDDY IQTAAETSTF EDTAHITMKT AIPVTTKSLL
100
101
PISSTSYTFV RTNNSHMTAS STEDTIGSGS ITHLPFPTTR ASLAAVNHIT
150
151
GRSTQLGGQT TLPKALFTPS HESTTTQRPT LSTIVSELTP TGKDRSTTSS
200
201
VPLVPRPTFV TWSSPAKIGT YEVLNGSRLC IKAEMGIALI VQEKGLDSAT
250
251
QRHFNIDPSL THASGKCGSQ NSNLFLNFQG GSVNVTFTKE ENLYYVSEVG
300
301
AYLTISNTEK TYQGKSTMMM FETVVGHSFK CVSEQSIQLS AQLQMKTMNI
350
351
HLQAFDFEGD SFGIVDECLS DYTVVLPVVG IIVVVLCVVG LGIYKIRQRR
400
401
QSSAYQRI                                              
408
 

Show the unformatted sequence.

Checksums:
CRC64:45FBA0878F0EABE8
MD5:05b0aa3c87b2aae7d8becec4990069c6

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;