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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: Q6DBN3_ARATH (Q6DBN3)

Summary

This is the summary of UniProt entry Q6DBN3_ARATH (Q6DBN3).

Description: tRNA-splicing endonuclease subunit {ECO:0000313|EMBL:AEE79646.1}
Source organism: Arabidopsis thaliana (Mouse-ear cress) (NCBI taxonomy ID 3702)
Length: 254 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
disorder n/a 1 25
Pfam tRNA_int_end_N2 27 93
disorder n/a 155 160

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q6DBN3. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MEEKDWEASS SSENEGGFPN DDDEEFHSGG SVPKLQFRVG SSKARWITEL
50
51
GMAEVEVKRG KLWTTTGIIR SGKTYCFIEE ALYLSEIGEL QILGNEDDIV
100
101
IPLKDLYEKI AEEKSGCSWE NYEVYRYLKG LGYILGRHGV SWTLKDAARP
150
151
NGEEESACAG ECPADNDTVT KLLGDMQICD AKAVFDVYLP NSRFKKSSPG
200
201
EPSFVACFSG DSPPSKEDIK VLQKRIAAPL TFCHIAQGRA SFFSFSSIDL
250
251
PVLS                                                  
254
 

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Checksums:
CRC64:68FE2D0F3283DD0A
MD5:a16b23b4d91249cba4b79bc6703b9b58

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;