!!

Powering down the Pfam website
On October 5th, we will start redirecting the traffic from Pfam (pfam.xfam.org) to InterPro (www.ebi.ac.uk/interpro). The Pfam website will be available at legacy.pfam.xfam.org until January 2023, when it will be decommissioned. You can read more about the sunset period in our blog post.

Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: Q8DPV2_STRR6 (Q8DPV2)

Summary

This is the summary of UniProt entry Q8DPV2_STRR6 (Q8DPV2).

Description: Uncharacterized protein {ECO:0000313|EMBL:AAK99795.1}
Source organism: Streptococcus pneumoniae (strain ATCC BAA-255 / R6) (NCBI taxonomy ID 171101)
Length: 425 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

Show or hide the data used to generate the graphic in JSON format.

Source Domain Start End
Pfam HTH_24 2 50
disorder n/a 51 53
Pfam DRTGG 74 176
Pfam CBS 185 241
low_complexity n/a 231 236
disorder n/a 246 247
Pfam CBS 250 306
Pfam 4HBT 342 417

Show or hide domain scores.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q8DPV2. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSKHQEILSY LEELPVGKRV SVRSISNHLG VSDGTAYRAI KEAENRGIVE
50
51
TRPRSGTIRV KSQKVAIERL TFAEIAEVTS SEVLAGQEGL EREFSKFSIG
100
101
AMTEQNILSY LHDGGLLIVG DRTRIQLLAL ENENAVLVTG GFQVHDDVLK
150
151
LANQKGIPVL RSKHDTFTVA TMINKALSNV QIKTDILTVE KLYRPSHEYG
200
201
FLRETDTVKD YLDLVRKNRS SRFPVINQHQ VVVGVVTMRD AGDKSPSTTI
250
251
DKVMSRSLFL VGLSTNIANV SQRMIAEDFE MVPVVRSNQT LLGVVTRRDV
300
301
MEKMSRSQVS ALPTFSEQIG QKLSYHHDEV VITVEPFMLE KNGVLANGVL
350
351
AEILTHMTQD LVVNSGRNLI IEQMLIYFLQ AVQIDDILRI QARIIHHTRR
400
401
SAIIDYDIYH GHQIVSKANV TVKIN                           
425
 

Show the unformatted sequence.

Checksums:
CRC64:DE6B6DFE3538A2AC
MD5:7a3a8a5266dbb44373dc2b5c2a270523

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
CBS 185 - 241 6UOF A 185 - 241 Show 3D Structure View in InterPro
250 - 303 6UOF A 250 - 303 Show 3D Structure View in InterPro
×

The parts of the structure corresponding to the Pfam family are highlighted in blue.

Loading Structure Data

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;